KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100408807
Entry
100408807         CDS       T03264                                 
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3 isoform X1
  KO
K14408  cleavage stimulation factor subunit 3
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100408807 (CSTF3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjc03019]
    100408807 (CSTF3)
Messenger RNA biogenesis [BR:cjc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     100408807 (CSTF3)
SSDB
Motif
Pfam: Suf HAT_PRP39_N HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_14 NRDE-2 TPR_16 TPR_19 TPR_6
Other DBs
NCBI-GeneID: 100408807
NCBI-ProteinID: XP_002755196
Ensembl: ENSCJAG00000005533
UniProt: F7BUE9
LinkDB
Position
11:complement(95193278..95271126)
AA seq 717 aa
MSGDGATEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNAVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq 2154 nt   +upstreamnt  +downstreamnt
atgtcaggagacggagccacggagcaggcagctgagtatgtcccagagaaggtgaagaaa
gcggaaaagaaattagaagagaatccatatgaccttgatgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttacgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggttgaaaagctatttcagagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatatgtccgagaaaccaagggtaaactaccaagttacaaagaa
aaaatggctcaagcatatgactttgcactggataaaattggaatggaaattatgtcctat
cagatttgggtggattacatcaatttcctaaaaggcgtggaagctgtaggatcttatgca
gaaaatcaaagaataacagctgtccgaagagtttatcaaaggggttgtgttaatcccatg
atcaacattgaacaactctggagagactataacaagtatgaagagggtatcaatattcat
ttagctaaaaaaatgattgaagatcggagtagagattatatgaatgctagacgtgtagca
aaggaatatgagacagtaatgaaaggcttggaccgcaatgctccctcagtgcctcctcag
aatactcctcaagaagctcaacaagtagatatgtggaagaaatatatacagtgggaaaag
agcaaccctcttcgtacagaggatcagacccttataacaaaaagagttatgtttgcttat
gaacagtgcctgcttgtgctgggccatcaccctgatatttggtatgaagctgcccagtat
cttgagcagtcaagtaaactgcttgcagaaaagggagatatgaataatgccaaattattt
agtgatgaagctgctaatatatatgaaagagccataagcactttattgaagaagaatatg
cttctttattttgcatatgcagattatgaagagagtcgcatgaagtatgaaaaggttcat
agtatatataaccgacttctggcaattgaggatattgaccccaccttggtatatatccaa
tatatgaaatttgcacggagagcagaaggcatcaaatctggaagaatgatatttaaaaaa
gcaagagaagataccagaacccgccaccatgtctatgttactgcagcactcatggagtat
tactgtagtaaggacaaatctgttgcctttaagatttttgagctggggctaaaaaagtat
ggagatattccagagtatgtcctggcctatattgactatctttctcacctcaatgaggac
aataatacccgagttttgtttgaacgagttttaacatctggaagccttcctcctgagaag
tctggagaaatatgggcccgatttctagcttttgaaagtaatattggtgatctagctagt
atactcaaggtggagaaaagacggtttacagcattcaaagaagagtatgaaggcaaagaa
accgctttactagtagacagatacaagttcatggatttatatccttgctctgcaagtgaa
ctaaaagcacttggttataaggatgtctcccgtgctaagctagcagctataattccagac
ccagttgtagctccttctatagtgcctgttctgaaagatgaagtggatagaaaaccagaa
taccctaaaccagacactcagcagatgattccatttcagccacgacatttagcacctcca
ggcttacatcctgtacctggtggagtgttcccagtcccccctgcagctgttgttttaatg
aaacttctccctcctcctatctgtttccagggtccctttgtacaagtggacgaactgatg
gaaattttccgaagatgcaagataccaaatactgttgaggaagctgtgaggattattacc
ggtggggccccagagctagctgtagaaggcaacggcccagtggaaagtaatgcagtactc
accaaggctgtcaaaaggcccaatgaggattcagatgaagatgaagaaaagggagccgtt
gtcccgcctgttcatgacatttacagagcacggcagcagaagcggattcggtag

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