Callithrix jacchus (white-tufted-ear marmoset): 100409225
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Entry
100409225 CDS
T03264
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X2
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100409225 (CHD9)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100409225 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
100409225
NCBI-ProteinID:
XP_017822304
Ensembl:
ENSCJAG00000001573
LinkDB
All DBs
Position
20:7700529..7986835
Genome browser
AA seq
2896 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQGTP
THQKMTDFEQLNQFDSMKFHHINQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVSD
GSPMWGHQTATSISNQNGSPFHQQGHSHAMHQSKSFVAHHDFALFQANEQQTQCTSLRSQ
QNRNNLNPGQNSLSQSKNFMNVSGPHRVNINHPPQMTNASNSQQSLSMQQFSQSSNPSVH
FLKCSSHQEGNFNGPSPNMTSCSVSNSQQFSSHYSFSSNHISPNSLLQSSAVLAPNHTNQ
TLSDFTGSNSFSPHRGIKQESTQHILNPNTSLNSNNFQMLHSSHPQGNYSNSKLSPVHMN
FPDPVDSGTQMGHFSDHVETNGFSSLEENLLHQVESQTEPFTGLDPEDLLQEGLLPHFDE
STFGQDNSSHILDHDLDRQFTSHLVTRPSDMAQTQLQSQARSWHSSFSNHQHLHDRNRLC
LQRQPPSSKKSDGSGTYTKLQNTQVRVMSEKKQRKKVESESKQEKANRIISEAIAKAKER
GERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKDSKKTKTCSKLKEKTKIGKLIIT
LGKKQKRKNESSDEISDAEQMPQHTLKDQDSQKRRSNRQIKRKKYAEDAEGKQSEEEVKG
SMKIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISPGVMIDTEEFFVKY
KNYSYLHCEWATEEQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLE
VSFCEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQASRPDTRCLDRP
PSNIWNKIDQSRDYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLY
EILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSLISRQMIQQYEMYFRDSQG
RIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEH
KVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMMLR
RLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMMEL
RKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGHK
VLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRA
GGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDRA
SLKLGLDKAVLQSMSGRESNVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDID
QILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIEAISGR
NSLVIDTPRIRKQTRPFSATKDELAELSEAESEGDEKPKLRRPYDRSNGYGRTECFRVEK
NLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLIHYRGDEKIKGFIWDLITPT
EDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKKHV
KHHCNKVLLRVRMLYYLKQEVIGNECQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFDAD
KSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPA
PAIFKDDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNKNRQ
IQQIQPTFLVPTSVMQPIYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPD
RGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEER
ASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHGVS
RTDYHILRDPELSFMAAQRNYSQNKMAHSKTSTPLLQQYQVALSASPLTSLPRLLEAKGI
ILEEMKVKSENLKEEPQSSEEESMSSVETRTLIKSEPVSPKNGVLPQATGDQKSGGKSET
DRRMVAARTEPLTPNPASKKQRGHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSSCSHS
RSGSSSSSSSSCSSASSSSSSSSSSSSSSSSSEESDSDEEETQKRESTTHMKAYDEESVA
SLSTTQDETQDSFQMNNGTPESAYVLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRSYDANTVASFYTTKLLDSPGAATDYSEPSVPTPPGVGVKEEHDQSTQMSKVKKHVR
EKEFTVKIKDEGGLKLTFQKQGLAQKRSFDGEDGALGQQQYLTRLRELQSASETSLVNFP
KSIPVSGTSIQPTLGANGVILDNQPIVKKRRGRRKNVEGVDILFFNRNKLPNHVTLGLTS
SQISRGINPALSYTQPQGIPDKESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGYVE
DLGAFIPRMQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENSEYGVAPEWGDVVKQSGFLPESMYERILTGPVVREEVSRRGRRPKSGIAKA
TAAAAAASATSVSGNPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPTGLSSG
GEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKPTESGTEDKKGSDSKEPEGKKERTESQS
SENGGENSVSSSPSTSSTAALNTAAAANPLALNPLLLSNILYPGMLLTPGLNLHIPTLSQ
SNTFDVQNKNSDLGSSKSVEVKEEDSRIKDQEDKGGTEPSPLNENSTDEGSEKADASSGS
DSTSSSSEGSDSSNED
NT seq
8691 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctttttggtgagaccttagaa
ggtttgtcagatgatgcatttgtacaaccaggtcctgtttcactagttgatgaattgaat
ttgggtgcagaatttgaaccgttgcacatagattcactgaaccatgttcaaggtactcca
acacatcagaagatgactgattttgaacagttaaatcaatttgattcaatgaaatttcac
cacattaatcaatcttttggtagcccggctgaacatgtgttatctccacactctcagttt
aattgttctccaatccacccccaaaaccaacccaatggtttatttccagatgtatcagat
ggcagtccaatgtggggccatcagacagctactagcatttcaaatcaaaatggatctcct
tttcaccaacaaggacattcacacgctatgcatcaaagtaaaagctttgtggcacaccat
gactttgccttattccaggccaatgaacaacaaacccagtgcacttcactacgctcacag
caaaacagaaataatctcaacccagggcagaattctcttagccagtctaaaaattttatg
aatgtttctggtccacatagagtcaacattaaccacccaccacaaatgactaatgcatct
aattcacaacagtctctttcaatgcagcaattttctcaatcgtcgaatccttcagtacac
ttcctcaagtgtagcagtcatcaagaaggaaattttaatggaccttccccaaatatgact
tcttgttctgtcagtaattcacagcagttttcttcacattattccttttccagtaatcat
atatcaccaaacagtctacttcagtcctctgcagttcttgcacctaatcacacaaatcag
actttatctgattttactggaagtaattccttttcacctcatagaggaatcaagcaagaa
tctactcagcatatcctaaaccccaatacatcattgaattcaaataatttccaaatgttg
cattcgtcacatcctcagggtaattatagcaattcaaaattatctcctgtgcacatgaac
ttcccagatcctgttgactcaggaactcaaatgggccatttcagtgatcacgtagaaact
aatggcttttcatctttagaagagaatttacttcatcaagtggaatctcaaactgagcca
ttcacaggacttgaccccgaggacctccttcaggagggtcttcttcctcactttgatgag
tcaacatttggacaagataattcaagtcacattttagatcatgaccttgatcggcagttt
acttcacatcttgtaacacggccttctgatatggctcagactcagttgcaaagtcaggct
cggagttggcattcatcgttttctaatcatcagcatttacatgacagaaatcggctatgt
ttacagagacagcctccgtcttccaagaagagtgatggttctgggacatatactaagttg
cagaatacccaggtgagggtcatgtctgagaagaagcagagaaaaaaggtggaatcagaa
agcaagcaagaaaaggctaatcgtataatatcggaggccatagcaaaagcaaaggagcgt
ggggaacgcaatatcccacgggtaatgagccctgaaaactttcctagtgcttcagttgaa
ggaaaagaggaaaagaaaggtagaaggatgaaatccaagccaaaggacaaagacagcaaa
aaaacaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcattattaca
ttgggtaagaaacaaaaaagaaagaatgagtcttcagatgaaatatctgatgcagaacag
atgccacagcatacattaaaagatcaagactctcaaaaaagaagatcaaatcgacaaatt
aaaagaaaaaaatatgcagaagatgcagaagggaagcaatctgaagaggaggtgaaaggc
tctatgaaaattaaaaagaattcagctcctttacctggtgaacagcctttacaattgttt
gtggagaatccgagtgaagaagatgctgcaattgtagacaaaattctatcttctagaatt
gtaaaaaaggaaatatcacctggagtgatgattgatacagaagaattttttgtaaaatac
aagaattactcctatcttcactgtgagtgggccacagaagagcagcttttgaaagataaa
aggatccagcagaaaatcaaacgattcaaattgagacaagcacaaagagcacattttttt
gcagacatggaggaagaaccatttaacccagactacgttgaagtagacagagtattagaa
gtctctttttgtgaagataaggatactggtgagcctgttatttactacttagtaaaatgg
tgctcattgccatatgaagatagtacttgggaactaaaagaagatgtagatcttgcaaaa
atagaagagtttgaacaactgcaagcttcaaggcctgatacaagatgtttggatcgtcct
ccttctaatatttggaataaaatagatcaatccagggactataaaaatggcaatcaactc
agggaatatcaactggaaggactcaattggctcttgttcaattggtacaatagacgaaac
tgcattttagcagatgaaatgggtcttggcaaaactattcagtcaattacattcctctac
gaaatccttctgactggtataagaggacctttcctgattattgctccactttctactatt
gcaaactgggagagagaatttcgtacatggactgatattaatgttgtggtttatcatggg
agcctgattagcagacagatgatacagcaatacgagatgtacttcagggattcacagggg
cgtatcatccgaggagcttatagattccaagccatcatcaccacttttgaaatgattctt
ggaggctgtggagagcttaatgcaattgaatggagatgtgtaattattgatgaagcacat
aggttaaaaaataaaaattgtaaactcttagaaggcctcaaactcatgaatctggaacac
aaggtgcttttgactggcacgcctctccaaaatacagttgaagaactgtttagtcttctt
cactttcttgaacctttaaggtttccttctgagtcaacatttatgcaagaatttggggat
ctgaaaacagaggaacaggtacagaaacttcaggctatcctgaaaccaatgatgttgaga
cgattaaaagaagatgtggaaaagaagttggcacctaaagaagaaaccattattgaagta
gaacttactaacattcaaaagaaatattaccgggctatcttggaaaagaacttttctttt
ttatccaaaggagcaggacaaactaatgtacctaacttggtcaataccatgatggagctc
aggaaatgctgcaatcatccatatcttatcaaaggtgctgaggaaaaaatacttggagaa
tttagagatacatataatcctgctgcttctgattttcatcttcaagcaatgatccagtct
gctggtaaattggtccttattgataagttacttcccaaaatgaaagctggaggtcataaa
gtgctcatcttctctcagatggttcgctgccttgacattctggaggattatctcatacat
aaaagatacttgtatgagcgaattgatggcagagtcagaggaaatcttcgacaagctgct
atagatagatttagtaaacctgattcagatagatttgtttttctcctgtgtacccgagct
ggtgggttgggcatcaacttaactgcagctgatacatgtataatttttgattctgattgg
aatcctcaaaatgatcttcaggcccaagctcgttgccacagaattggtcagaacaaagca
gttaaagtctacagactggtgactcgtaactcatatgagagggagatgtttgaccgagcc
agtttgaaactgggcctagataaggctgtattacagagcatgagtggaagagaaagtaat
gttggtggtattcaacagctttccaaaaaggaaatagaagaccttcttcgaagaggtgct
tatggtgccattatggaggaagaagatgaaggctctaaattctgtgaagaggatatcgat
cagattttactacgtcgtacaaaaaccattacaattgaatcagaaggacgtgggtcaaca
tttgccaaggcaagttttgtggcatctggaaaccggacagatatttctttagatgatccc
aacttctggcaaaaatgggctaaaaaggcagaaatagatatagaggccatcagtggcaga
aacagcttggttattgacactccaagaattaggaagcaaacaagaccttttagtgccaca
aaagatgaattggctgaattatctgaagctgaaagtgaaggagatgaaaagcctaaactc
cggagaccctatgaccgttccaatggctatggaagaactgaatgctttagagttgagaaa
aacctgctagtttatgggtggggccgatggagagagattctatctcatggccgttttaaa
aggcagttaaatgaacacgatgtagaaataatttgccgagccctcttagcatattgcctt
attcactaccgaggagatgagaagattaaaggtttcatatgggatcttattactccgact
gaagatgggcagacacgagagctacagaatcatctaggcctatcagctcctgtacccagg
ggtcgaaaagggaagaaagtaaaaactcaaacaagctcatttgatatacaaaaagcagaa
tggcttcgaaaatataatcccgagcagctacttcaagatgaaggctacaaaaaacatgta
aaacaccactgtaacaaggttttgcttcgtgtgagaatgctatattatctaaagcaagaa
gttattggaaatgagtgtcagaaagtatttgatggagttgatgcgagtgacattgatgtt
tgggtaccagaaccagaccactcagaagttcctgctgagtggtgggattttgatgctgat
aagtcactccttattggagtttttaaacacggatatgaaaaatataacactattcgagca
gacccagcattatgcttcttggaaagagtgggaaaacccgatgacaaagcagttgctgcc
gaacagagagcaaatgattatatggatggggatgtggaagatccagaatacaaacctgca
ccagccatctttaaagatgatatagaggatgatgtttcctcaccaggagatcttgttata
gcagatggagatggtcaactgatggagggtgataaagtatattggcctactcaatcagct
ttaaccacacgtttgaggcgtctcatcactgcataccagcgtactaataaaaacagacaa
attcaacagatacaaccaactttcttggtgcctaccagtgtaatgcagcctatttatgag
gaagccactcttaatcctaaaatggcagccaaaatagaaagacagcaaagatggacaaga
agagaagaagctgacttttatagggttgtatctacatttggagtcgtttttgaccctgac
agaggccaatttgattggacaaaatttagagctatggctagactacataagaaaactgat
gatagtttggagaaatatttgtacgcattcatgtccatgtgtcggagggtttgtcgtctt
ccttccaaagaagaattggtggatccaaatatttttatccagcccatcacagaagaacgt
gcttctaggactttgtatcgcattgaacttctaaggaaagtacgggaacaggcccttcga
catccacagttgtttgaacgcttgaagctttgccatccaaatccagacttaccagtctgg
tgggaatgtggccctcatgacagggatttgcttattggtgctgccaaacacggggtgagc
cgaacagactatcacattcttcgtgatcctgaactctcatttatggcagctcagaggaac
tacagtcaaaataagatggctcattcaaagacttccaccccacttttacagcaatatcaa
gtagcactttctgcttctcctcttacctctctacctaggctcctagaggctaaaggtatt
attctagaggagatgaaagttaaaagtgaaaatcttaaagaggagcctcagtcttctgaa
gaagaatctatgtcttctgtggaaaccaggacactaataaaatctgagcctgtaagtcca
aagaatggtgttttaccacaggctactggagaccagaaatctggtggaaaaagtgaaaca
gacagacgcatggttgcagccagaacggaacccctaactccaaacccagcttctaagaaa
cagagaggccacaaaagaggatcagaatctagttctgattctgactcagattctgagaga
tcatcctgttcttccagatcatcttcttcctcgtcatcctcctcctcttgttcccactct
agatcaggctctagttcttcttcttcttcatcttgttcttcagcatcttcttcatcctcc
tcctcttcctcatcctcttcctcttcatcttcatcagaagaaagcgacagtgatgaagag
gaaacccaaaaaagagagagtaccactcacatgaaagcctatgatgaagaaagcgtcgca
tcattgagcactacccaggatgagactcaggatagttttcagatgaacaatgggacacca
gagtctgcttatgtcttacaaggtggatatatgctggcggcctcctattggccaaaggat
cgtgtgatgatcaatcggttggacagtatttgtcaaacagttctgaaaggaaagtggcct
tcagctagaagaagttatgatgctaatacagtggcttctttctatacaacaaaactgctg
gacagccctggagcagctacagactacagcgagccaagtgtacccactcccccgggtgtc
ggtgttaaagaagaacatgatcagtcaacacagatgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaaagacgaaggtggtctgaagttgacatttcagaag
caagggcttgctcagaagagatcatttgatggtgaagatggtgctctggggcaacagcaa
tacctcactcggcttcgagagcttcaaagtgcatcagagaccagccttgtcaatttccca
aaatccataccagtatcaggtacttccattcaaccaactcttggtgccaatggtgtgata
ttagacaaccagcctatagtcaaaaaaaggcgaggaaggaggaagaatgtagaaggtgtt
gacatcctcttctttaacagaaataaactacctaatcatgttactttaggcttaacctcc
tcacagatttccagagggataaatccagcactgtcctatactcagcctcaaggaattcct
gataaagaaagtccagttccagttattaatcttaaagatggaacacgacttgcaggagat
gatgcaccgaagagaaaggatttggaaaaatggcttaaggagcacccaggttatgtggaa
gatttgggagcttttattcctagaatgcagcttcatgagggaaggcccaaacaaaaaaga
catcgttgcagaaaccccaataaactagatgtgaatagtctcaccggagaagaacgtgtt
caactgattaacagaagaaatgctagaaaggttggaggtgcattcgctccccctttaaaa
gatttatgtaggttcctaaaagaaaattcagaatatggagtagctcctgaatggggagat
gttgttaagcaatctggatttcttccagaaagcatgtatgaacgtattctcactggtccc
gtagtgagagaggaagtaagcaggcgggggagacggcctaaaagtggaattgcaaaggcc
acagcagcagcagcagctgcatctgccaccagtgtttcaggcaatcctttgttagccaat
ggattacttccaggtgtggatctcacaactcttcaggccttacaacaaaacctacaaaac
ttgcagtcactgcaagtaactgcagggttgatgggaatgcctactggcctttcttctgga
ggagaagctaaaaacatggctgctatgttccccatgctgctgtcaggaatggctggatta
ccaaatctgttgggcatgggaggactcctgacaaagcctacggaatctgggacagaagac
aaaaagggaagtgactccaaggagccagaaggaaaaaaagaaaggacagagagccaaagt
tcagagaatggtggagaaaactctgtgtcaagttctccgtccacgtcctctactgctgca
ttaaatacagctgcagctgccaacccattagctcttaacccactattactatctaatata
ctttatccagggatgcttctcactccaggccttaatcttcatattccaactttgtcccag
tccaatacttttgatgtacaaaacaaaaacagtgacttaggctcatctaagtctgtagaa
gttaaggaagaagattccagaattaaagatcaggaagacaaagggggaactgaaccaagt
cctctcaatgaaaacagcacagatgagggttcagagaaagctgatgcttcatctggatct
gatagtacatcatcgtcatctgagggttcagattctagtaatgaagactga
DBGET
integrated database retrieval system
