Callithrix jacchus (white-tufted-ear marmoset): 100409366
Help
Entry
100409366 CDS
T03264
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
cjc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100409366 (CASC3)
03015 mRNA surveillance pathway
100409366 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100409366 (CASC3)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100409366 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
100409366
NCBI-ProteinID:
XP_035155582
Ensembl:
ENSCJAG00000016032
UniProt:
A0A8J8YCR0
LinkDB
All DBs
Position
5:67871035..67901933
Genome browser
AA seq
702 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPLRGGGSCSGSAGGGGSGSLSSQRGGRIGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAVNSSTKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKAGKKGPKQLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRYGSPPQRDPNWNVEKLNKSHRHQGLGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGAFKESRPGFRPVEAGGQQGGWSGETVKHDTSYRSRHLEQTRVR
DPSPEANAPVPGSPEKEETASETLAAAPDTTPPAPDRPIEKKSYSRARRTRTKVGDAVKL
AEEVPPPPEGLIPAPPVPETTATSPTKTGNWEAPVDSTTSGLEQDVAQLNIAEQNWSPGQ
PSFLQPRELRGMANHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIVEGHYYDPPQFQGPIYTHGDSPAPLPPQGMLVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVIFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVY
GGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgagcttctcaagataccgaggacgaggaatctggtgct
tcgggctcagacagcggcggctccccgttaaggggcggcggtagctgcagcggtagcgcc
ggaggcggcggcagcggctctctgtcttcacagcgcggaggccgaatcggggcccttcat
ctgcggcgggtggaaagcgggggcgccaagagcgctgaggagtcggagtgtgagagtgaa
gatggcattgaaggtgatgctgttctctcggattatgaaagtgcagaagactcggaaggt
gaagaaggtgaatacagtgaagaggaaaactccaaagtggagctgaaatcagaagctaat
gatgctgttaattcttcaacaaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtgacgggagagaggcaaagtggggacggacaggagagcacggagcctgtggagaac
aaagcaggtaaaaagggccctaagcagttggatgatgatgaagatcggaagaatccagca
tacatacctcggaaagggctattctttgagcatgatcttcgagggcaaactcaggaggaa
gaagtcagacccaaggggcgtcagcgaaagctatggaaggatgagggtcgctgggagcat
gacaagttccgggaagatgagcaggccccaaagtctcgacaggagctcattgctctgtat
ggttatgacattcgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
ccccgatatgggagtcctccacaaagagatccaaactggaatgttgagaagctaaacaag
tcccatcgccaccagggtcttgggggtaccctaccaccaaggacatttattaacaggaat
gctgcaggtaccggccgcatgtctgcaccgaggaattattctcgatctggggccttcaag
gaaagtcgtcctggttttaggcctgtggaagctggtgggcagcagggtggctggtctggt
gagactgttaagcatgatactagttaccggtcacggcatctagagcagactcgtgtgagg
gatccatctccagaagcaaatgctccagtgcctggcagtcctgagaaggaagagacagcc
tcagagacattagctgctgctcctgataccacaccaccagccccggacaggcccattgag
aagaaatcctattcccgggcaagaagaacccgaaccaaggttggagatgcagtcaagctt
gcagaagaggtgccccctcctcctgaggggctgattccagcacctccagtcccagaaacc
accgcaacttcacctactaagactgggaactgggaggctccagtggattccactacaagt
ggacttgaacaagatgtggcacaactaaatatagcagaacagaattggagtcccgggcag
ccttctttcctgcagccacgggaacttcgaggtatggccaaccatatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtggtcgagccaaa
cgctattcatcccagcggcaaagacctgtgccagagccccctgcccctccagtgcatatc
agtatcgtggagggacattactatgatccaccacagttccagggaccaatctatacccat
ggtgacagccctgccccgctgcctccacagggcatgcttgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccagcgcctctgcccaatccgggtctctat
cccccaccagtgtccatgtctcctggacagccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgttatctttggtaatcccagttacccttatgctccaggggca
ctgcctcccccaccgccgcctcatctatatcctaatacgcaggccccatcgcaggtatat
ggaggagtgacctactataaccccgcccagcagcaggtgcaaccaaagccctccccaccc
cggaggactccccagccagtcaccatcaagccccctccacctgaggttgtaagcaggggt
tccagttaa
DBGET
integrated database retrieval system
