Callithrix jacchus (white-tufted-ear marmoset): 100409397
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Entry
100409397 CDS
T03264
Symbol
PPHLN1
Name
(RefSeq) periphilin-1 isoform X6
KO
K21872
periphilin-1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100409397 (PPHLN1)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100409397 (PPHLN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lge1
HERV-K_REC
Motif
Other DBs
NCBI-GeneID:
100409397
NCBI-ProteinID:
XP_009001863
Ensembl:
ENSCJAG00000017726
LinkDB
All DBs
Position
9:complement(29649179..29814002)
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AA seq
613 aa
AA seq
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MAYRRDEMWSEGRYEYERLPRERASPRSHPSDGYNRLVNIGPKKPPLLDRPGEGSYNRYY
SHVDYRDYDEGRSFSHDRRSGPPHRGDESGYRWTRDDHSASRQPEYRDMRDGFRRKSFYS
SHYARERSPHKRDNAFFRESPGGRKDSPHSRSGSSVSSRSYSPERSKSYSFHQSQHRKSV
RPGASYKRQNEGSSERDKERPAQSLKTSRDTSPSSASAASSSKVLDKPSRLTEKELAEAA
SKWAAEKLEKADESNLPEISEYEAGSTAPLFTDQPEEPESNTADAIELFEDSQLTSRSKA
IASKTKEIEQVYRQDCETFGMVVKMLIEKDPSLEKSIQFALRQNLHEIESAGQTQQLAPH
VMNAATDHVGTLKNEGEETAQSALFGFQHNASNITTVQPEPNPVPEVKEVTPKNLQSQRL
RLRRTAQAPSITWGVLKKTTQEAEQILLRTQTPCTPDNLFLAMLSVIHCNSCKVLTFLIL
SLCLQPVPATLYWAHRLDRPFFHPVTWADTPFPASNNVTAWLGGIDLPRVGFLINDAHWT
KVPGNTIYHSTLLPLCVSYKSSNSDCVPAQTQLLLHHGKGNALTFLVVGSLKLGNATNAT
FPKEQTQSGFHFG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcttacagaagagatgaaatgtggtctgagggacgatatgaatatgaaagacttccg
agagaacgagcatctcctcgaagtcatcccagtgatggctacaatagactagttaatatt
gggccaaagaaaccaccactgctagacagacctggtgaaggaagctacaatagatattac
agtcatgttgattaccgagactatgacgagggccgcagtttttctcatgatcgaagaagt
ggtccacctcacagaggagatgaatctggttatagatggacaagagatgatcattctgca
agcaggcaacctgaatacagggacatgagagatggctttagaagaaaaagtttctactct
tcccattatgcaagagaacggtctcctcataaaagagacaatgcttttttcagagaatca
cctggtggccgaaaggattctccacacagcagatctggctccagtgtcagtagcagaagc
tactctccagaaaggagcaaatcatactctttccatcagtctcaacataggaagtccgtg
cgtcctggtgcatcctacaaacgacagaatgaaggaagttctgaaagagacaaagagagg
cctgcccagtctttgaaaacatcaagagatacttcaccctcaagtgcttcagcggcttct
tcatcaaaggtgttagacaaacccagtaggctaactgaaaaggaacttgctgaggctgca
agcaagtgggctgctgaaaagctagagaaagcagatgaaagtaacttgcctgaaatttct
gagtatgaggcaggatccacagcaccattatttactgaccagccagaggaacctgagtca
aacacagcagatgccatagaattatttgaagatagtcagctaaccagtcgctctaaagca
atagcatcaaaaaccaaagagattgaacaggtttaccgacaagactgtgaaactttcggg
atggtggtgaaaatgctgattgaaaaagatccttcattagaaaagtctatacagtttgca
ttgaggcagaatttacatgaaatagagtctgcaggacagactcagcagctggcgccccat
gtgatgaatgctgcaacggatcatgtcggaaccctcaaaaatgaaggtgaagagactgca
cagtcagccctctttggattccagcacaatgcatcaaacattaccacggtgcagccagaa
cccaacccagtaccagaagtgaaggaagtgaccccaaagaacctacagtcccagaggttg
cggcttcgccggacggcacaagccccatctatcacctggggggtgctgaagaagacgact
caggaggctgaacaaatcctgctccggacacagacaccatgcactccagataatttattc
cttgctatgctttctgttatacattgcaactcctgtaaggtattaacctttcttattctc
tcactttgccttcaacccgtacctgctacactctattgggctcatcgcctagatcggcct
ttcttccaccctgttacctgggcagacactcccttcccagcctctaataatgtaactgct
tggctaggagggattgacttaccccgggtagggttcctcattaatgacgcacattggact
aaggtgccaggtaacactatatatcactccactctccttccattgtgtgtaagttataaa
agttctaactctgactgtgtacctgcccaaacacaattattgctacatcatggcaaagga
aatgccttaacgttcttggttgtaggtagcctcaaactgggcaacgcaactaatgccacc
ttccccaaagaacaaacccaaagtggattccactttggctga
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