Callithrix jacchus (white-tufted-ear marmoset): 100409519
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Entry
100409519 CDS
T03264
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X4
KO
K17925
sorting nexin-13
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
100409519 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100409519 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Swi3
Rep3_C
Motif
Other DBs
NCBI-GeneID:
100409519
NCBI-ProteinID:
XP_002751574
Ensembl:
ENSCJAG00000001040
UniProt:
U3FK03
LinkDB
All DBs
Position
8:37826860..38010037
Genome browser
AA seq
957 aa
AA seq
DB search
MLTEASLSIWGWGSLGIVLFLITFGPFVIFYLTFYILCFVGGGLVVTLLFGKTNSEKYLE
QCEHSFLPPTSTGVPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQKIT
EKDDQAKGTAEDLVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPGD
FQNKIMRYFVREILARGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVRDKAVEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINTV
KLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
LSRQRDGKHQTNQTKGLLRAAAVGIYEQYLSEKASPRVTVDDYLVAKLADTLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSPT
GSINLSLDDLSNVSSDDSVQLHAYISDTGVCNDHGKTYALYAITVHRRNLNSEEMWKTYR
RYSDFHDFHMRITEQFESLSSILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLAPEMMK
ASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTK
MSDNMGKMSERLGQDIKQSFFKVPPLIPKTDSDPEHRRVAAQLDDNVDDNIPLRVMLLLM
DEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVADSVKRFRDA
FWPNGILAETVPCRDKSIRMRTRVAGKTKLLAIMPDELKHIIGAETTRKGILRVFEMFQH
NQLNRRMVYVFLEGFLETLFPQYKFRDLFNKLHSRSKQMQKYKQKLQTTQAPSLQKR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgttaactgaggccagtctatccatatggggatggggaagccttggcattgtcctgttt
ctaataacctttggaccctttgtaatattttatttgacattttatatcctctgctttgtg
ggtgggggtttagtggttactctcctgtttggaaaaacaaactcagagaagtacctagaa
cagtgtgaacactcatttcttcctccaacatcaactggggttcctaagtgcttagaagaa
atgaaacgggaagccaggactattaagattgatagaagattgactggtgccaatataatt
gatgaacctctccagcaagttatccagttttccttgagggattatgtccagtattggtat
tatacactaagtgatgatgaatcttttcttcttgaaattaggcagactcttcaaaatgca
ctaattcagtttgctactaggtcaaaagaaatagactggcaaccttattttactacacgc
attgtagatgattttggcacacacttacgagtattcagaaaggctcaacagaaaataaca
gagaaagatgaccaagcaaaaggtacagcagaagatcttgtagataccttctttgaagtt
gaagttgaaatggagaaggaggtttgccgtgatctagtgtgcacttctcccaaagatgaa
gaaggtttcctaagagatttgtgtgaggtcttactatatttattgctacctcctggagat
ttccagaacaagatcatgcgatactttgtcagggaaatccttgcacgaggaattcttctt
ccattaataaatcaactcagtgatcctgattatattaatcagtatgtcatatggatgatc
cgtgattctaattgcaactatgaggcctttatgaacattattaaattgagtgacaatatt
ggagagctagaggcagtcagagataaggcagtagaagaattacagtatcttagatctcta
gatacagctggtgatgatatcaacactatcaaaaatcaaataaatagcttactgtttgta
aagaaagtatgtgactcaagaatacagcgattgcagtcaggcaaagaaataaatactgtg
aaacttgcagcaaactttgggaaactgtgcacggtccctctggacagcattcttgtagac
aatgttgcactacaattttttatggattacatgcaacaaactggaggacaagcacatctg
ttcttttggatgacagtggaaggataccgggttaccgcccaacagcagctagaggtttta
ttaagtcgtcagagagatggaaaacatcaaactaaccaaaccaaaggccttttaagagca
gctgctgttggaatttatgaacagtatttatcagaaaaggcatctccaagagttactgtt
gatgattatttagtagcaaaattagcagatactttgaatcatgaagatccaacccctgaa
atctttgatgacattcaaaggaaggtatatgaattgatgctacgagatgaaagattttat
ccttccttcagacagaatgcactttatgtgcgcatgttagctgagcttgacatgttaaaa
gatcctagtttcagaggatccgatgatggggatggagaatcttttaatgggtctcctaca
ggaagcataaatttgtctttagatgacctttcaaatgtatcttctgatgactcagtacaa
cttcatgcctacatttcagacactggagtttgtaatgatcatggcaagacatatgcatta
tatgccatcactgtacaccggcgtaacctaaacagtgaggaaatgtggaaaacctatcgt
cgttatagtgacttccatgacttccacatgagaatcactgaacagtttgaaagtctatca
agcattttgaagcttcctggaaaaaagacttttaataatatggatagagattttttagaa
aagagaaaaaaggatctaaatgcatatttgcagttactattagctcctgaaatgatgaag
gcatccccggctttagcgcactatgtatatgatttccttgagaacaaagcctacagtaaa
ggaaaaggggattttgctcgcaagatggacacttttgtaaatcctctgcgcaattctatg
aggaatgtttcaaatgcagttaaatcccttcctgatagcttggcagagggaatgactaaa
atgtcagacaacatgggcaaaatgtcagaaagattaggtcaagacataaagcaatcattt
tttaaggtgcctcctttaattccgaagaccgattcagaccctgaacatcgccgtgttgct
gctcaacttgatgataatgtggatgacaatattccacttagggtaatgctgcttctcatg
gatgaagtattcgacttaaaagaaagaaatcagtggttgcgaaggaatatcaaaaaccta
cttcaacagcttattagagctacatatggtgatactattaatagaaaaatagttgaccat
gttgattggatgacttcacctgaacaagtagccgactcagtgaaacgtttcagagatgca
ttttggccaaatggcattttagcagagactgttccatgcagagataaaagtattcgaatg
agaacaagagtagcaggaaaaacgaagttacttgcaattatgccagatgaactgaagcac
attattggggcagagacaacacggaaaggtattcttcgtgtttttgaaatgtttcagcac
aaccaattaaataggagaatggtttatgtcttcttggaaggctttttagaaaccttattt
ccacagtataaattccgtgaccttttcaacaaactgcattcacggtcaaagcagatgcag
aaatataaacagaaacttcaaactactcaagcgccttctttacagaaaaggtga
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