KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100409603
Entry
100409603         CDS       T03264                                 
Symbol
TUBB1
Name
(RefSeq) tubulin beta-1 chain isoform X1
  KO
K07375  tubulin beta
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04145  Phagocytosis
cjc04517  IgSF CAM signaling
cjc04540  Gap junction
cjc04814  Motor proteins
cjc05010  Alzheimer disease
cjc05012  Parkinson disease
cjc05014  Amyotrophic lateral sclerosis
cjc05016  Huntington disease
cjc05020  Prion disease
cjc05022  Pathways of neurodegeneration - multiple diseases
cjc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    100409603 (TUBB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    100409603 (TUBB1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    100409603 (TUBB1)
  09142 Cell motility
   04814 Motor proteins
    100409603 (TUBB1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100409603 (TUBB1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100409603 (TUBB1)
   05012 Parkinson disease
    100409603 (TUBB1)
   05014 Amyotrophic lateral sclerosis
    100409603 (TUBB1)
   05016 Huntington disease
    100409603 (TUBB1)
   05020 Prion disease
    100409603 (TUBB1)
   05022 Pathways of neurodegeneration - multiple diseases
    100409603 (TUBB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cjc03036]
    100409603 (TUBB1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cjc04812]
    100409603 (TUBB1)
   04147 Exosome [BR:cjc04147]
    100409603 (TUBB1)
Chromosome and associated proteins [BR:cjc03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100409603 (TUBB1)
Cytoskeleton proteins [BR:cjc04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100409603 (TUBB1)
Exosome [BR:cjc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100409603 (TUBB1)
  Exosomal proteins of colorectal cancer cells
   100409603 (TUBB1)
  Exosomal proteins of bladder cancer cells
   100409603 (TUBB1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_2 Tubulin_3
Other DBs
NCBI-GeneID: 100409603
NCBI-ProteinID: XP_002747767
Ensembl: ENSCJAG00000018914
UniProt: F7I1T7
LinkDB
Position
5:52321682..52340621
AA seq 451 aa
MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDSAGSDRGASALQLERISVYYNEAYGRKYV
PRAVLVDLEPGMMDSIRSSKLGALFQPNSFVHGNFGAGNNWAKGHYTEGAELIENVLEVV
RHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREDYPDRIMNSFSVMPSPKVSDTVV
EPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGITTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNTM
AACDPRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSGCFVEWIPNNVKVAVCDIPPQG
LSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAESNIHDLVS
EYQQFQDAKAVLEENEEVTEEAEMEPEDKGH
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgaaattgtccacattcagattggccagtgtggcaaccagatcggagccaagttc
tgggagatgattggtgaggagcatgggatcgactcagctgggagtgaccgcggggcctcg
gccttgcagctggagagaatcagtgtgtactacaacgaagcctacggtaggaaatatgtg
ccccgagcagtcttggtggacctagaacctgggatgatggacagcattcgatctagcaaa
ttaggagccctctttcaacccaacagttttgtccacggtaactttggggctggcaacaac
tgggccaaaggccattacacggagggagccgagctgattgagaatgtcctggaggtggtg
aggcacgagagtgagagctgtgactgcctgcagggcttccagatcgtccactccctgggc
gggggcacaggctccgggatgggcactctgctcatgaacaagatcagagaggactacccg
gaccggatcatgaattccttcagtgtcatgccttcccccaaggtgtcggacacagtggtg
gagccctacaacgcggtcttgtctatccaccagttgattgagaatgcagatgcctgtttc
tgcattgacaacgaggccctctatgacatctgcttccgtacgctgaagctgacgacaccc
acctacggggatctcaaccatctggtgtccttgaccatgagcggcataactacctccctc
cggttcccaggtcagctcaacgcagacctgcgcaagctggcagtgaacatggtccccttc
ccccgcctgcacttcttcatgcccggctttgccccgctcacggcccagggcagccagcag
taccgggccctctccgtggctgagctcacccagcagatgttcgacgcccgcaacaccatg
gctgcctgtgacccccgccgtggccgctacctaacagtggcctgcatcttccggggcaag
atgtccaccaaggaagtggaccagcagctgctctccgtgcagaccaggaacagcggctgt
tttgtggagtggattcccaacaatgtcaaggtggctgtttgcgacatcccgccccagggg
ctgagcatggccgccaccttcattggcaataacacggccatccaagagatctttaatagg
gtctctgagcatttctcagccatgttcaaaaggaaagcttttgtgcactggtacaccagc
gaagggatggacataaacgagtttggggaagctgaaagtaacatccatgatttggtatct
gagtaccaacaatttcaagatgccaaagcagttctagaggaaaatgaagaggtcacagag
gaggcagaaatggagccagaagataagggacattaa

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