Callithrix jacchus (white-tufted-ear marmoset): 100409708
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Entry
100409708 CDS
T03264
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X2
KO
K26583
transcriptional-regulating factor 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100409708 (TRERF1)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
100409708 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2
zf-C2H2_4
Myb_DNA-binding
zf-C2H2_2
Myb_DNA-bind_7
zf-met
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
100409708
NCBI-ProteinID:
XP_002746586
Ensembl:
ENSCJAG00000004347
UniProt:
F6ZRX3
LinkDB
All DBs
Position
4:complement(46861242..47097343)
Genome browser
AA seq
1216 aa
AA seq
DB search
MGDQQLYKTNHVAHGSENLFYQQPPLGVHSGLNHNYGNAVTGGGMDAPQASPISPHFPQD
TRDGLGLPVGSKNLGQMDTSRQGGWGSHAGPGNHVQLRGNLANSNMMWGAPAQAEPTDGY
QYTYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGTPDSA
LRQLLSQKPMEPPAPAIPSRYQQVPQQPHPGFTGGLSKPALQVGQHPTQGHLYYDYQQPL
AQVPVQGGQPLQAPQMLSQHMQQMQQHQYYPPQQQQQAGQQRISLQEIQTQQQQIRPSQS
QPQPQQQQLQLPQRQGSMQIPQYYQPQPMMQHLQEQQQQQMHLQPPSYHRDPHQYTPEQA
HTVQLIPLGSMSQYYYQEPQQPYSHPLYQQSHLPQHQQREDSQLKTYSSDRQAQAMLSSH
GDLGPPDAGMGDPASSDLTRVSSTLPHRPLLSPSGIHLNNMGPQHQQLSPSAMWPQMHLP
DGRAQPVSPESSGQPKGVFGEQFDAKNKLTCSICLKEFKNLPALNGHMRSHGGMRASPNL
KQEEGEKVLPPQPQPPLPPPPPPPPPPQLPPEAESLTPMVMPVSVPVKLLPPKPSSQGFT
NSTVAAPSVRDKPASSMSDDEMPVLVRMTLSPPHSPQGAAPRTPAEIPKKQQPSLPKAEE
PLKTVQEKKKFRHRPEPLFIPPPPSYNPNPTASYLGATLYQSQLRSPRVLGDHLLLDPTH
ELPPYTPPPMLSPVRQGSGLFSNVLISGHGPGAHPQLPLTPLTPTPRVLLCRSNSIDGSN
VTVTPGPGEQTVDVEPRINIGLRFQAEIPDLQDISALAQDTHKATLVWKPWPELENHDLQ
QRVENLLNLCCSSALPGGGTNSEFALHSLFEAKGDVMVALEMLLLRKPVRLKCHPLANYH
YAGSDKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCVEYYYTWKKIMRLGRKHRT
RLAEIIDDCVTSEEDEELEEEEEDPEEDRKSTKEEESEVPKSPEPPPVPVLAPTEGPPLQ
ALGQPSGSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKARGAVPSGKQKPGGAQSGY
CSVKSSPSHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQQRQKAQKAAF
AAEMAATIERTTGPVGAPGLLPLDQLSLIKPIKDVDILDDDVVQQLGGVMEEAEVVDTDL
LLNDQDSVLLQGDAEL
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcagcaactgtacaagaccaaccacgtggcgcacggtagtgagaaccttttc
taccaacagccaccacttggtgtccacagcgggctgaaccacaactatgggaatgcagta
acagggggcgggatggatgcccctcaggcctcgcccatctccccccatttccctcaagat
acgcgggatggtctgggcttgcctgttggctccaaaaaccttggccaaatggatacctcg
aggcagggagggtgggggagtcatgcagggcctggaaaccatgtccagctacgtggaaac
ctggccaactcaaatatgatgtggggggcaccagcccaggctgagcccactgatggctac
caatacacctactcccaggccagcgagatccggacccagaagcttaccagcggtgtcttg
cacaagctggactctttcacccaggtgtttgccaatcaaaacctgcgaattcaggtcaac
aatatggcccaggtgctgcacacccagtcagcagtgatggatggaacccctgacagtgcc
ctccgccagctgctgtctcagaagcccatggagcccccagcaccggctatcccttcccgc
taccagcaggtgccccagcagcctcaccctggtttcactggtgggctgtccaaaccagct
cttcaggtcgggcagcaccctacccaagggcacctgtattatgactaccagcagccactg
gctcaggtgccagtgcagggaggacagccgctgcaggccccacagatgctgtcacagcac
atgcagcagatgcagcagcaccagtattacccaccgcagcaacagcagcaagctgggcaa
cagcgtatctccttgcaagaaatacagacacagcagcaacagattcgcccatcacagtct
cagccgcagccgcagcagcagcagctacagctgccacagcggcagggttcgatgcagata
cctcagtattatcagccccaacccatgatgcagcacttgcaagagcagcagcagcaacag
atgcacctgcagcccccttcttatcacagggaccctcaccagtataccccagagcaggca
cacactgtccagctgattcctctgggctccatgtcccagtactactaccaggagccccag
cagccctacagccaccccctctaccagcagagccacctgccccagcaccagcagcgtgag
gacagtcaactgaagacctactctagcgacagacaggcccaggccatgctgagctcccac
ggggacctggggcctcctgacgcaggaatgggagacccagcaagctcagatctcacccgg
gtcagcagcaccctcccgcatcggcccctcctgtcccccagtgggatccacctcaacaac
atggggcctcagcatcagcagctgtctcccagtgccatgtggccccagatgcacctacct
gatgggagagcccagccagtttcccctgagtcaagtggccaacccaaaggagtgtttggg
gagcagtttgatgccaagaacaagctgacgtgctccatctgcctgaaggagttcaagaac
ctgcctgccctgaacggccacatgcggtcccatgggggaatgagggcctcccccaacctc
aaacaggaggaaggagagaaggtcctgccgcctcagccccagccgccactgccgcctccg
cctccgcctccgccgccgccacagctccctcccgaggcagaaagcctcacgcctatggtc
atgcctgtgtctgtccctgtcaagcttctcccgcccaagcccagctctcaggggttcacc
aacagcaccgttgccgccccctccgtcagagacaagccagccagctcgatgtcggacgac
gagatgcctgtgctcgtgaggatgaccctctctcccccacactcaccccaaggggctgcc
ccccgcacgcctgctgaaatccccaagaagcagcagcccagcctgcccaaagccgaggag
cccctcaagaccgtgcaggagaagaaaaagttccggcaccggccggaaccactcttcatc
ccgccgccgccctcctacaacccgaaccccaccgcctcctacttgggcgccaccctgtac
cagagccagctgcgctccccacgtgtcctcggagaccacctgctcctggaccccacccac
gagctgcccccttacacgcccccacccatgctgagcccggtgcgccagggctcgggactc
ttcagcaatgtgctcatctccggccacggccctggcgcccacccacagctgcccctgacg
cccctgacccccacaccgcgggtgctgctgtgtcgctccaacagcattgatggcagcaat
gtgacggtcaccccagggcctggagagcagactgtggatgttgaaccacgcatcaacatt
ggcttgagattccaagcagaaatccccgacctccaagatatctctgccctggcccaggac
acacacaaggccacactggtatggaagccctggccagagctagaaaaccatgacctccag
caaagagtggagaatcttctgaatttgtgctgttcaagtgcattgccaggtggagggacc
aattctgaatttgctttgcactctctgtttgaggccaaaggtgatgtgatggttgctctg
gaaatgctgctgctgcggaagccggtcaggttaaaatgtcatcctttagcaaattaccac
tatgccggttcggacaagtggacctccttagaaagaaaactgtttaacaaagcactagcc
acttacagcaaagattttatttttgtacagaagatggtgaagtccaagacggtggctcag
tgtgtggagtactactacacatggaaaaagatcatgcggctggggcggaaacaccggaca
cgcctggcagaaatcatcgacgactgcgtgacaagtgaagaagacgaagagttagaggag
gaggaggaggacccggaagaagataggaaatccacaaaagaagaagagagtgaggtgccg
aagtccccggagccgccacctgtcccagtcctggctcccacggaggggccgcccctgcag
gccctgggccagccctcaggctccttcatctgtgaaatgcccaactgtggggctgtgttc
agctcccgacaggcactgaatggccatgcccgcatccacgggggcaccaaccaggtgacc
aaggcccgaggtgccgtcccttctgggaaacagaagcctggaggtgcccagagtgggtac
tgttcggtgaagagctcaccctctcacagcaccaccagcggcgagacagaccccaccacc
atcttcccctgcaaggagtgtggcaaagtcttcttcaagatcaaaagccgaaatgcgcac
atgaaaactcacaggcagcaggaggaacagcagcggcaaaaggctcagaaggcggctttt
gcagctgagatggcagccacgattgagaggactacggggcccgtgggggcgccagggctg
ctgcccctggaccagctgagtctgatcaaacccatcaaggacgtggacatcctcgatgat
gatgtcgtccaacagttgggaggtgtcatggaagaggcagaagtcgtggacaccgatctt
ctcttgaatgatcaagattcggtcttgcttcagggtgatgcagaactataa
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integrated database retrieval system
