Callithrix jacchus (white-tufted-ear marmoset): 100409731
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Entry
100409731 CDS
T03264
Symbol
PLXNB3
Name
(RefSeq) plexin-B3
KO
K06821
plexin B
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100409731 (PLXNB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
TIG_2
TIG_plexin
PSI
PSI_Plexin-B
Sema
PSI_PlexinA-B
GHMP_kinases_N
Motif
Other DBs
NCBI-GeneID:
100409731
NCBI-ProteinID:
XP_054107012
Ensembl:
ENSCJAG00000011267
LinkDB
All DBs
Position
X:145041341..145051994
Genome browser
AA seq
1709 aa
AA seq
DB search
MCRTVQETPLLLHFTAPVMVRWPPFSLCLLLLLLSPPPLPLTGAHRFSAPNTTLNHLALA
AGRGTLYVGAVNRLFQLSPELQLEAMAVTGPVIDSPDCVPFRDPAECPQAQLTDNANQLL
LVSSRTQELVACGQVRQGVCETRRLGDVAEVLYQAEDPGDGQFVAANTPGVATVGLVVPS
PTQDLLLVARGLAGKLSAGVPPLAVRQLAGPQPFSSEGLGRLVVGDFSDYNNSYVGAFAD
NRSAYFVFRRRGARAQAEYRSYVARVCLGDANLYSYVEVPLACQGQGLIQAAFLAPDTLL
GAFAAGPRGTQAALCAFPMVELGASMEQARRLCYTAGGRGPSGAEEATVEYGVTSRCVTL
PLDSPESYPCGDEHTPSPIAGRQALEAQPLLQLTQSVSAVAALQADGHMIAFLGDTQGQL
HKVFLHGSQGQVYHSQQVGPLGSAISPDLLLDSSGSYLYVLTAHQVDQIPVAACPQFPDC
ASCLQAQDPLCGWCVLQGRCTRKGQCRRAGQPNQWLWSYEENSHCPHIQSLLPGHHPRQE
QGQVTLSVPRLPTLAADEYFHCAFGDYDSLAYVEGPHVACVTPPQDQVPLSPPGTDHVTV
PLALVFEDVAVAATNFSFYDCSAVQALEGAAPCRACVGSIWRCHWCPQSSHCVYGEHCPE
GERTIYSAQEVDVQARGPGACPQVEGLAGPHLVPVGWESHLALLVRNLQHFRGLPASFHC
WLELPGELRGLPAILEETAGDSGLIHCQAHQFHPSMSQRELPVPIYVTQGKAKRLDNAHA
LYVILYDCAMGHPDCSHCQAANGSLGCVWCADGQPACRYGPLCPPGAVELLCPAPSIDAV
EPLTGPPEGGLALTILGSNLGRTFTDVQYAVSVASRPCNPEPSLYRTSARIVCVTSPAPN
GTTGPVQVAIKSQPPGISSQHFTYQDPVLLSLSPRWGPQAGGTQLTIHGQHLQTGSTSSA
FVGGQPCPILEPVCPEAIVCRTRPQAVPGEAAVLVVFGHVQRTLLTSPFRYTANPQLIAA
EPSASFRGGGRLIRVRGTGLDAAQRPLLSVWLEADGMVQASRIQPRDPEPRRSCGAPAAD
PQACIQLGGGLLQCSTVCSVNSSSLLLCWSPAVPDGARLRRVFFTLDNVQVDFASASGGQ
GFLYQPNPRLAPLSHEGPTRPYRLKPGHILDVEGEGLNLGISKEEVRVYIGRGECLVKTL
TRTHLYCEPPVRAPQPANGSVLPQFVVHMGNLQLALGPVQYEAEPPLSAFPVEAQAGLGM
GAAVLIAAVLLLTLMYRHKSKQALRDYQKVLLQLESLETGVGDQCRKEFTDLMTEMTDLS
SDLEASGIPFLDYHTYAERAFFPGHGSYPLQPQPEGLGEDGRCATVRQGLTQLSNLLNSK
LFLLTLIHTLEEQPTFTQRDRCHVASLLSLALHGKLEYLTDIMRTLLGDLAAHYVHRNPK
LMLRRTETMVEKLLTNWLSICLYTFLREVAGEPLYMLFRAIQYQVDKGPVDAVTGKAKRT
LNDSRLLREDVEFQPLTLMVLVGPEAGGAAGSSEVQRVPARVLDTDTITQVKEKVLDQVY
KGTPFSQRPSVHALDLEWRSGLAGHLTLSDEDLTSVTHNHWKRLNTLQHYKVPDGATVGL
VPQLHSGGAVCQSLAQSCPLGENISMLEDGEEGGVHLWHLVKATEEPEEAKVRRSSLRER
ELAQAKAIPEIYLTRLLSMKKFVDDTFQA
NT seq
5128 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgcactgtccaggagacccctctgctgctccatttcacggcccccgtgatggtt
cgctggcctcccttcagcctctgcctcctcctgctgctgctgtccccaccgccactgccc
ttgacaggggcccatcgcttctccgcacccaacaccaccctcaaccacttggcactagca
gctgggcgaggcacgctctacgtcggcgcggtgaaccgcctcttccagctcagccccgag
ctgcagctcgaggccatggctgtcactggccctgtcatcgacagccccgactgtgtgccc
ttccgtgacccggccgagtgcccgcaagcgcagctcaccgacaatgccaaccagctactg
ctggttagcagccgcacccaggagctggtggcctgtgggcaggtgcggcagggcgtgtgc
gagacacggcgccttggggacgtggccgaggtgctgtaccaggccgaggaccctggtgac
gggcagtttgtggctgccaataccccaggagtggcgacggtagggctggtggtgccctcg
cccacccaggacctcctgcttgtggccagaggcctggcgggcaagctgtcggcaggggtg
ccacccctggccgtccgccagctggcggggcctcagcccttctccagtgagggcctggga
cgcttggtggtgggcgacttttccgactacaataacagctacgtgggggcctttgcggac
aaccgctctgcttactttgtcttccgccgccgaggggcccgggcccaggctgagtaccgc
tcctatgtggcccgcgtctgcctgggggatgccaacctgtactcctacgtggaggtcccc
ctggcctgccagggccagggcctcatccaggccgccttccttgccccagacaccttgcta
ggggcattcgctgctggcccaaggggtacccaggcagcgctctgcgccttccccatggtg
gagctgggcgcaagcatggagcaggcacgaagactttgctacacggcgggcggccgaggc
cccagtggcgcagaggaagccaccgtggagtacggtgtcacgtctcgctgtgtcaccctg
ccccttgactctcctgagtcgtacccctgtggtgacgaacacacccccagccccattgct
ggccgccaagccctggaggcccagcctctgctgcagctcacgcagtcagtcagcgccgtg
gcagccctccaggcagacgggcacatgatcgccttcctgggggacacccagggccagctg
cacaaggtctttctgcacggctcccagggccaggtttaccactcccagcaagtgggacct
ctgggctcagccatcagcccagacctgttgctggacagcagtggcagttatctctatgtc
ctgactgcccaccaggtggaccagatacctgtggcagcctgcccccagttccctgactgt
gccagttgcctccaggcccaggacccactgtgcggctggtgtgtcctccagggcaggtgt
acccggaagggccagtgcaggcgggcaggccaaccgaaccagtggctgtggagctatgag
gagaacagccactgcccacacatccagagtctgctgccaggccaccacccccgccaggag
cagggtcaggtcaccttgtctgtcccccggctccccaccctggctgcagatgaatacttc
cattgtgcgttcggggactatgacagcttggcttacgtggaagggccccatgtggcctgt
gtcacccctccccaagaccaggtgccacttagccctccaggcacagaccacgtcaccgtg
cctctggccctggtgttcgaggatgtggctgtggctgccaccaacttctccttctatgac
tgcagtgctgtccaggccttggagggggctgccccgtgtcgcgcatgtgtgggcagcata
tggcgatgtcattggtgcccccagagtagccactgcgtgtatggagagcactgcccagag
ggcgagaggaccatctacagtgcccaggaggtggatgtccaggcgcgtggcccaggggct
tgcccacaggtcgaaggcctggcaggcccccacctggtgcctgtgggctgggagagccat
ttggccctactggtgcggaaccttcagcatttccgaggcctgcctgcctccttccactgc
tggctggagctgcctggagaacttcgggggctgccagctatcctggaggagacagcaggg
gactcgggcctcatccactgccaggcccatcagttccacccctccatgtcccagcgggag
ctcccagtgcccatctatgtcacccagggcaaggccaagcggctggacaatgcccatgcc
ctttatgtaatcctgtatgactgtgccatgggccacccagactgcagccactgccaagcg
gccaacggcagcctgggctgcgtgtggtgtgctgacgggcagcctgcctgtcgctacggg
cccctgtgcccaccaggggccgtggagctgctgtgtcctgcccccagcattgatgcggtc
gagcccctgactggtccccctgagggaggcttggccctcaccatcctgggctccaacctg
ggccggaccttcaccgacgtgcagtatgccgtgagtgtggccagtcggccatgcaaccct
gagccctctctctaccgcacctcggcccggattgtgtgtgtgacatctcctgcccccaac
ggcaccactgggcctgtccaggtggccattaagagccagccaccgggtatctcaagccag
cacttcacctaccaggaccctgtcttgctgagcctgagtcctcgctggggcccccaggca
gggggcacccagcttaccatccacggtcagcacctccagacaggcagcacctccagcgcc
tttgtgggtggccaaccctgtcccatcctggagccagtgtgtccggaggccatcgtgtgc
cgtaccaggccccaggctgtcccaggagaagcagcggtccttgtggtgtttggccatgtg
cagcgcacactgctcaccagccccttccgctacactgccaacccccagcttatagcagca
gagcccagcgccagctttcgggggggtggacggctgatccgagtcaggggcactggccta
gatgcggcacagcggcccctactgtctgtgtggttggaggctgacggcatggtgcaggct
tccaggattcagccccgggacccagagccaaggaggagctgtggagcccctgctgcagac
ccccaggcttgtatccagcttggtggggggctcctgcagtgctccaccgtctgctctgtc
aactcgtccagccttctcctctgctggagccctgccgtgccagacggggcccgcctgagg
cgggtcttcttcaccctagacaatgtgcaagtggatttcgccagtgccagtgggggccag
ggcttcctgtaccagcccaacccccgcctggcacccctcagccacgaggggcccacccgc
ccctaccgcctcaagccaggccacatcctggacgtggagggtgagggcctcaacctgggc
atcagcaaggaggaggtacgtgtgtacatcggccgcggtgagtgcctggtgaagacactc
acgcgcacccacctgtactgtgagccacctgtgcgtgccccacagcccgccaatggctcc
gtgctgccacagtttgtggtgcatatgggcaacttgcagctggccctgggccctgtacag
tacgaggccgagcccccactgtccgcctttcccgtggaggcccaggcaggcctgggcatg
ggcgctgctgtgctgattgccgccgtgctcctcctcaccctcatgtataggcacaaaagc
aagcaggccctgcgggactaccagaaggtgctgctgcagctggagagcctggagaccggc
gtcggagaccagtgccgcaaggagttcacagacctcatgacggagatgaccgacctcagc
agtgacctggaggccagcgggatccccttcctggactaccacacctacgctgagcgagcc
ttcttccctggccacggcagctacccgctgcagccccagcccgaggggctgggggaggat
ggccgctgcgccactgtgcgccagggcctcacgcagctctccaacctgctcaacagcaag
ctcttcctcctcacgcttatccacaccctggaggagcagcccacctttacccagagggac
cgctgccatgtggcttcgctgctgtcgctggcgctgcatggcaagctggagtacctgacc
gacatcatgaggaccctgctgggtgacctggcggcccattacgtgcaccgaaaccccaag
ctcatgctacgcaggacagagaccatggtggagaaactgctcaccaactggctgtccatc
tgcctgtacaccttcctgagggaggtggccggtgagccactgtacatgctcttccgggcc
atccagtaccaggtggacaagggccctgtggacgccgtgacaggcaaggccaaacggacc
ctgaatgatagtcgcctgctgcgggaggatgtggaattccagcccctgacgctgatggtg
ctggtggggcccgaggctggcggggctgcaggcagcagcgaggtgcagcgcgtgcctgct
cgggtgctcgacaccgacaccatcacccaggtcaaggagaaggtgttggaccaagtctac
aagggcacccccttctcccagaggccctcagtgcatgccctagaccttgagtggcgctca
ggcctggctggtcacctgaccctgtcggatgaagacttgacctctgtgacccacaaccac
tggaagagactcaacaccttgcagcactataaggtcccagatggagcaacagtggggctc
gtccctcagctgcacagtggcggtgctgtctgccagagcctggcccagagctgccccttg
ggagaaaacatctccatgctggaggatggcgaggagggcggggtgcacctctggcacctg
gtaaaagccactgaggagccagaagaggccaaggtacggcgcagcagcctgcgggagcgg
gagctggctcaggccaaggctattccggaaatctacctcacccgtttgctgtccatgaag
aagtttgtggacgacaccttccaggcca
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