Callithrix jacchus (white-tufted-ear marmoset): 100409761
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Entry
100409761 CDS
T03264
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03030
DNA replication
cjc03410
Base excision repair
cjc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100409761 (POLE)
03410 Base excision repair
100409761 (POLE)
03420 Nucleotide excision repair
100409761 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjc03032
]
100409761 (POLE)
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100409761 (POLE)
Enzymes [BR:
cjc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100409761 (POLE)
DNA replication proteins [BR:
cjc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
100409761 (POLE)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
100409761 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
CENP-B_dimeris
Motif
Other DBs
NCBI-GeneID:
100409761
NCBI-ProteinID:
XP_035114157
Ensembl:
ENSCJAG00000012853
UniProt:
F7FLS5
LinkDB
All DBs
Position
9:complement(132242934..132299301)
Genome browser
AA seq
2285 aa
AA seq
DB search
MALRSGGRRRADPGADGEAGRDDGPTSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKT
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFL
SKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTVEDLVKVRKEIFPAVKKNREQ
DHASDTYTAMLSSVLQRTSVITDEEEASKKIADQLDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNVRYRGNAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMVSYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETRPTVMV
TYNGDFFDWPFVEARAAVHGLSMQQEIGFQKDSQGEYKAPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDSETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTLRHAIEEEEKVPVEQVTNFQELC
DQIKSKLASLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPSLFPEGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHITKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAVEVGDAAEVKRCKNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVFKTTNVKKPKVTISYPGAMLNLM
VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYASVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRAILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVYKQKKISELFTLEGRRQVMMAQA
PGDSLRPSAPDMEDFGLVKPPHPPAHIAVKRKRVLWESQEESQDLTPTVPWQEILGQPPA
LGTTQEEWLVWLRFHKKKWQLQARQRLARRKRQRLESAEGVPRPGAIRDGPATGLGSFLR
RTARSILDLPWQIVQISETSQPGLFRLWALIGSDLHCIRLSIPRVFYVNQRVAKAEEGAS
YRKVNRVLPRSNVVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVH
LGCVCVVNKQLVRHLSGWEAETFALEHLEMRSLAQFSYLEPGSIRHIYLYHHMQGHKALF
GIFIPSQHRASVFVLDTVRSNQMPSLGALYSAEHGLLLEKVGPELLPPPKHTFEVRAETD
LKTICRAIQRFLLAYKEERRGPTLIAVQSNWELKRLAREIPVLEEFPLVPICVADKINYG
VLDWQRHGARRMIRHYLNLDTCLSQAFEMSRYFHIPIGNLPEDISTFGSDLFFARHLQRH
NHLLWLSPTARPDLGGKEADDNRLVMEFDDQATVEINSSGCYSTVCMELDLQNLAVNTIL
QSHHVNDMEGADSMGISFDVIQQASLEDMITGGQAASAPASYDETALCSNTFRILKSMVV
GWVKEITQYHNIYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLIAEFKRLG
SSVIYANFNRIILCTKKRRVEDAIAYVEYITSSIHSKEIFHSLTISFSRCWEFLLWMDPS
NYGGIKGKVSSRIHCGLQDSQKAGGAADEQEDEDEEEEREGEEEDAEESDVEDLLENSWN
ILQFLPQAASCQSYFLMIVSAYIVAVYHCMKDGLRRSAPGSTPVRRRGASQLSQEAEETA
GALPGMITFSQDYVANELTQSFFTITQKIQKKVTGSRNSAELSEMFPVLPGSHLLLNNPA
LEFIKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVLPEVICRSC
NFCRDLDLCKDSSFSEDGVVLPQWLCPNCQAAYDSSAIEMALVEVLQKKLMAFTLQDLVC
LKCRGVKETHMPVYCSCAGDFALTIHTKVFMEQIRIFQNIAQHYGMSYLLETLEWLLQKN
PQLGH
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaggagcggcgggcggcggcgcgcggacccgggcgcggacggcgaggccggc
agggatgatggccccacttcctcagtctccgcactcaagcgcctggaaaggagtcagtgg
acggataagatggatttgcggtttggttttgagcggctgaaggagcctggtgagaagaca
ggctggctcattaacatgcatcctaccgagattttagatgaagataaacgcttagtcagt
gcagtggattactacttcattcaagatgatggaagcagatttaaggtggccttgccctat
aaaccatatttctacattgcaaccagaaagggttgtgagcgagaagtttcatcttttctt
tccaagaagtttcagggcaaaattgcaaaagtggagactgtccccaaagaggatctggat
ttgccaaatcacttggtgggtttgaagcgaaattacatcaaactgtccttccacactgtg
gaggatcttgtcaaagtgaggaaggagatcttccctgcagtgaagaagaacagggagcag
gatcatgccagtgacacgtacacagctatgctttccagtgttctgcaaaggaccagtgtc
attactgatgaagaggaagcctctaagaagatagctgatcagttggacaacattgtggac
atgcgcgagtacgatgtcccctaccacatccgcctctccattgacctgaagatacatgtg
gctcactggtacaatgtcagataccgaggaaatgcttttccagtggaaatcacccgccga
gatgacctcgttgaacgacctgaccctgtggttttggcatttgacattgagacaacgaaa
ctgcccctcaagtttcctgatgctgagacggaccagattatgatggtttcctacatgatc
gacggccagggctacctcatcaccaacagggagattgtttcagaagatattgaagacttt
gagttcacccccaagccagaatatgaagggcccttttgtgtgttcaatgagcctgatgag
gctcatctgatccaaaggtggtttgagcatgtccaggagaccagacccaccgttatggtc
acctacaacggggacttttttgactggccatttgtggaggcccgggcagccgtccacggg
ctgagcatgcagcaggagataggcttccagaaggacagccagggggagtacaaggcaccc
cagtgcatccacatggactgcctcaggtgggtgaagagggacagttatcttcccgtgggc
agccataacctcaaggcggctgccaaggccaagctaggctatgatcctgtggagctggac
ccggaggacatgtgccggatggccaccgagcagccccagacactggccacatactccgtg
tcagatgctgtcgccacttactacctgtacatgaagtacgtccacccctttatcttcgct
ctgtgcaccattattcccatggagcccgacgaggtgctgcggaaaggctctggcacactg
tgtgaggccttgctgatggtgcaggccttccacgccaacatcatcttccccaacaagcag
gagcaggagttcaataagctaacggacgacggacacgtgctggactccgagacctacgtg
gggggccacgtggaggccctcgagtctggggtcttccgcagtgatatcccttgccggttt
aggatgaatcccgctgcctttgatttcctgctgcagcgggttgagaagaccttgcgtcat
gccattgaggaagaggagaaggtgcccgtggaacaagtcaccaactttcaagagttgtgt
gatcagattaagagcaagcttgcctccctgaaggaggttcccaaccgcatcgagtgtcca
ctcatctaccacctggacgtgggcgccatgtaccccaacatcatcctgaccaaccgcctg
cagccctctgccatggtggacgaagccacctgtgctgcctgtgacttcaataagcctgga
gcgaactgccagcggaagatggcctggcagtggaggggcgagttcatgccggccagccgc
agcgaataccaccggatccagcaccagctggagtcagagaagttcccctccttgttccca
gaggggccagctcgggcctttcatgaactgtcccgtgaggagcaggcgaaatacgagaag
aggaggctggcggattactgccggaaagcctacaagaaaatccacatcaccaaggtggaa
gagcgcctcaccaccatttgccagcgggaaaactccttctacgtggacaccgtgcgtgcc
ttccgggacaggcgctatgagttcaaagggctccacaaggtgtggaaaaagaagctctcc
gcggccgtggaggtgggcgacgcggccgaggtgaagcgctgcaagaacatggaggtgctg
tatgactcgttgcagctggcccacaagtgcatcctgaattccttctatggctacgtcatg
cgcaagggggctcgctggtactccatggagatggccggtatcgtctgcttcaccggggcc
aacatcatcacccaggcgcgggagctaatcgagcagattgggaggcctttggagctggac
acagatggcatatggtgtgtcctgcctaacagcttcccagaaaattttgtcttcaagaca
accaacgtgaagaagcccaaggtgaccatctcctacccaggtgccatgttgaacctcatg
gtcaaggaaggcttcaccaatgaccagtaccaggagctggccgagccatcgtcactcacg
tacgtcacccgctcagagaacagcattttttttgaggttgatgggccctaccttgccatg
atccttccagcctccaaggaagaaggcaagaaactgaagaagagatatgctgtgttcaac
gaagatggttccctggctgagctcaagggctttgaggtcaaacgccgcggggagctgcag
ctgattaagatcttccagtcctcggtgtttgaggccttcctcaagggcagcacgctggag
gaggtgtatgcctctgtagccaaggtggccgactactggctggatgtgctgtacagcaag
gcagccaacatgcctgactccgagctctttgagctcatctctgagaaccgttccatgtct
cggaagctggaggattacggggagcagaagtccacgtccatcagcacagcaaagcgcctg
gccgagttcctgggagaccagatggtcaaggatgcagggctgagctgccgctacatcatc
tcccgcaagcccgagggctcccctgtcacagagagggccattccacttgccattttccaa
gcagagcccacagtgaggaagcactttctccggaaatggctcaagagctcttcccttcaa
gactttgatattcgggcaattctggattgggattactacattgagcggctgggaagtgcc
atccagaagatcatcaccattcctgcagccctgcagcaggtgaagaatccagtgccacgc
gtcaaacaccctgactggctgcacaaaaaactgctggagaagaatgatgtctacaagcag
aagaagatcagcgagctcttcaccctggagggcaggagacaggttatgatggcccaggcc
ccaggagacagtctgaggccaagtgctcccgacatggaggactttggcctggtgaagcca
cctcacccaccagcccatattgctgtgaagaggaagcgagtcctttgggagagccaagag
gaatcccaggacctcacgccaactgtgccctggcaggagatcttggggcagcctcctgcc
ctgggaaccacccaggaagagtggcttgtctggctccggttccacaagaagaagtggcag
ctgcaggcccggcagcgccttgcccgcaggaagaggcagcgtctggagtcagcagaaggc
gtgccgaggcctggggccatccgagatgggcctgccactgggctggggagcttcttgcga
agaactgcccgtagcatcctggaccttccatggcagattgtgcagatcagcgagaccagc
caacccggcctgttcaggctctgggcactcattggcagtgacttgcactgcatcaggctg
agcatcccccgtgtgttctacgtgaaccagcgagttgccaaagcagaggagggtgcctcg
tatcgcaaggtaaatcgggtccttcctcgctccaatgtggtctacaatctctatgagtat
tcagtgccggaggacatgtaccaggaacacatcaatgagatcaacactgagctgtcagca
ccagacatcgagggcgtatacgagactcaggttccgttactgttccgggccctggtgcac
ctgggctgtgtgtgtgtggtcaataaacagctggtgaggcacctttcaggctgggaagca
gagacctttgctcttgagcacctggagatgcgctctctggcccagttcagctacctggaa
ccagggagtatccgccatatctacctgtaccaccacatgcagggccacaaagcgctcttc
gggatcttcatcccctcacagcacagggcgtccgtgtttgtgctggacactgtgcgcagc
aaccagatgcccagccttggtgccctgtactcggcggagcatggcctcctcctggagaag
gtgggccctgagctcctgccgcccccaaaacatacctttgaagttcgggcagaaaccgac
ctgaagaccatctgcagagccatccagcgcttcctgcttgcctacaaggaggagcgccgg
gggcccacactcattgccgttcagtccaactgggagctgaagaggctggccagggagatt
cctgtcttggaggaattcccgctggtgcctatctgtgtggctgacaagatcaactatggg
gttctggactggcagcggcatggagcccggcgcatgatccggcactacctgaacctggac
acctgcctgtcgcaggccttcgaaatgagcaggtacttccacattcccatcggaaacctg
ccagaggacatctccacctttggctccgacctcttctttgcccgccacctccagcgccac
aaccacctgctctggctgtcccctacagcccgccctgacctgggtggaaaggaggctgat
gacaaccgccttgtcatggagtttgatgaccaagccacagttgagatcaacagttcaggc
tgttactccacagtgtgtatggagctggatcttcagaacctggccgtcaacaccatcctc
cagtctcaccacgtcaatgacatggagggggccgacagcatgggcatcagcttcgacgtg
atccagcaggcctccctggaggacatgatcacgggcggtcaggctgccagtgccccggcc
agctacgatgagacagctctgtgctctaacaccttcagaatcctgaagagcatggtggtg
ggctgggtgaaggagatcacccagtaccacaacatctacgcagacaaccaggtgatgcac
ttctaccgctggcttcggtcaccgtcctctctgctgtacgaccctgccctgcaccgcacg
ctccacaacatgatgaagaagctcttcctgcagctcatcgctgagttcaagcgcctgggg
tcatcagtcatctacgccaacttcaaccgcatcatcctctgtacaaagaagcgccgtgtc
gaagacgccattgcctacgtggagtacatcaccagcagcatccattctaaggagatcttc
cattccttgacgatttctttctctcgatgctgggaatttcttctctggatggacccatct
aactatggcggaatcaaaggaaaagtttcatctcgtattcactgtggactgcaagactcc
cagaaagcagggggagcagcggatgagcaggaagatgaggatgaggaggaggaaagggaa
ggagaggaggaggatgcggaggagtccgatgtggaggatttactggaaaacagctggaac
attttgcagtttttgccacaggcagcctcctgccagagctactttctcatgattgtttca
gcgtacattgtggccgtgtaccactgcatgaaggatgggttgaggcgcagtgccccaggg
agtacccccgtgaggaggcggggggccagccagctctcccaggaggccgaggagacagct
ggagcccttcccggaatgatcaccttctctcaggattatgtcgcaaatgaactcactcag
agcttcttcaccatcactcagaagatacagaagaaagtcacaggctctcggaactctgcc
gagctctcggagatgtttcctgtcctccctggttcccacttgctgctcaataaccctgct
ctggagttcatcaaatacgtgtgcaaggtgctgtccctggacaccaacatcacaaaccag
gtgaataagctgaaccgagacctgcttcgcctggtggatgtcggtgaattctccgaggag
gcccagttcagagacccctgccgctcctacgtgctccctgaggtcatctgccgcagctgt
aacttctgccgcgacctggacctgtgtaaagactcttctttctcagaggacggggtggtc
ctgcctcagtggctctgccccaactgtcaggcggcttacgactcctctgccattgagatg
gcgctggtagaagtcctgcagaagaagctgatggccttcaccctgcaggacctggtctgc
ctgaagtgccgcggggtgaaggagacccacatgcctgtgtactgcagctgcgcaggagac
tttgcccttaccatccacaccaaggtcttcatggaacagatcagaatcttccagaacatt
gcccagcactatggcatgtcatacctcctggagaccctggagtggctgctgcagaagaac
ccacagctgggccattag
DBGET
integrated database retrieval system
