Callithrix jacchus (white-tufted-ear marmoset): 100409783
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Entry
100409783 CDS
T03264
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100409783 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjc03041
]
100409783 (USP39)
Spliceosome [BR:
cjc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
100409783 (USP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
100409783
NCBI-ProteinID:
XP_002757592
Ensembl:
ENSCJAG00000019594
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All DBs
Position
14:complement(25408728..25443055)
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AA seq
585 aa
AA seq
DB search
MCRALKRAWRLRWVTRPVVAMSGRSKRESRGSTRGKRESESRGSSGRVKRERDRERDPEA
ASSRGSPVRVKREVEPASAREASSSVIPFVRVKREREVDEDSEPEREVRAKNGRVDSEDR
RSRHCPYLDTINRSVLDFDFEKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFS
HHVFLNLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTY
LPGIVGLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGEL
MRKLWNPRNFKAHVSPHEMLQAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKK
KKTIVTDVFQGSMRIFTKKLPHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPL
YKDEKEQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKN
NFFVEKNPTIVNFPITNVDLREYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLH
HGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDNDETNQQGA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgcgcgctcaagcgtgcctggcgcctgcgctgggtgactcggccggtagtggcg
atgtccggtcggtctaagcgggagtctcgtggttccacccgcgggaagcgagagtccgag
tcgcggggcagctccggtcgcgtcaagcgggagcgagatcgggagcgggatcccgaggcg
gcgagctcccggggcagtcctgtgcgcgtgaagcgggaggtcgagccagcgagcgcgcgc
gaggcctcgtcttctgttataccatttgtccgggtgaagagggagcgcgaggtcgatgag
gactcggagcctgagcgggaggtgcgagcaaagaatggccgagtggattctgaggaccgg
aggagccgccactgcccatacctggacaccattaatagaagtgtgctggactttgacttt
gagaaactgtgttctatctccctctcacatatcaatgcttacgcctgtctggtgtgtggc
aagtactttcaaggccgcggtttgaagtctcatgcctacattcacagtgtccagtttagc
caccatgttttcctcaacctccataccctcaagttttactgccttccagacaactatgag
atcatcgattcctcattggaggatatcacgtatgtattgaagcccacttttacaaagcag
caaattgcaaacttggacaagcaagccaaattgtcccgggcatatgatggtaccacttac
ctgccgggtatcgtgggactgaataacataaaggccaatgactatgccaacgctgtcctt
caggctctatctaatgttcctcctctccggaactactttctggaagaagacaactataag
aacatcaagcgtcctccaggggatattatgttcttgttggtccagcgttttggagagctg
atgagaaagctctggaaccctcgaaatttcaaggcacatgtatctccccatgagatgctt
caggcagttgtactttgcagtaagaagacttttcagatcactaaacaaggggatggagtc
gactttctgtcttggtttttgaatgctctgcactcagctctggggggcacaaagaagaaa
aagaagactattgtgactgatgttttccaggggtccatgaggatcttcactaaaaagctt
ccccatcctgatctgccggcagaagaaaaagagcagttgcttcacaatgatgagtaccag
gagacaatggtggagtccacttttatgtacctgacactggaccttcctactgcccccctc
tacaaggacgagaaggagcagctcatcattccccaagtgccactcttcaacatcctggcc
aagttcaatggcatcactgagaaggaatataagacttacaaggagaactttctaaagcgc
ttccagcttactaagctgcctccatatctaatcttttgtatcaagagattcactaagaac
aacttctttgttgagaagaatccaactattgtcaatttccctattacaaatgtggatctg
agagaatacttgtctgaagaagtacaagcagtacacaagaataccacctatgatctcatt
gccaacatcgtgcatgacgggaaaccctccgagggctcctaccggatccacgtgcttcat
catgggacaggcaaatggtatgaattacaagacctccaggtgactgacatccttcctcag
atgatcacgctgtcagaggcttacattcagatttggaagaggcgagataatgatgaaacc
aaccagcagggggcttga
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