Callithrix jacchus (white-tufted-ear marmoset): 100409842
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Entry
100409842 CDS
T03264
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04151
PI3K-Akt signaling pathway
cjc04382
Cornified envelope formation
cjc04510
Focal adhesion
cjc04512
ECM-receptor interaction
cjc04518
Integrin signaling
cjc04820
Cytoskeleton in muscle cells
cjc04926
Relaxin signaling pathway
cjc04933
AGE-RAGE signaling pathway in diabetic complications
cjc04974
Protein digestion and absorption
cjc05146
Amoebiasis
cjc05165
Human papillomavirus infection
cjc05200
Pathways in cancer
cjc05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100409842 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100409842 (COL4A5)
04518 Integrin signaling
100409842 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100409842 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100409842 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
100409842 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
100409842 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
100409842 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100409842 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
100409842 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
100409842 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
100409842 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
100409842 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjc04147
]
100409842 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
cjc00536
]
100409842 (COL4A5)
Exosome [BR:
cjc04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100409842 (COL4A5)
Glycosaminoglycan binding proteins [BR:
cjc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100409842 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100409842
NCBI-ProteinID:
XP_035143888
Ensembl:
ENSCJAG00000007434
UniProt:
F7I070
LinkDB
All DBs
Position
X:101100921..101351710
Genome browser
AA seq
1685 aa
AA seq
DB search
MKLRGVSLAAGLFLLALSLWGQPAEAATCYGCSPESKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
VPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGMHGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDIGPPGPPGLVIPRPGTGITIGEKGN
IGLPGLPGEKGERGFPGIQGPPGLPGPPGAAAMGPPGPPGFPGERGQKGDEGPPGISIPG
PPGLDGQPGAPGLPGPPGPPGPHIPPSDELCEPGPPGPPGSPGDKGLQGEQGVKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGF
PGSKGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQNGLPGLPGPKGEPGRITSKG
ERGPPGNPGLPGHPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGNPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGTPGITGLEGPPGPPGFPGPKGEPGFAVPGPPGPPGLPGFKGTLGPKGDRGFP
GPPGPPGRTGLDGLPGPKGDVGPSGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHG
IPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGPIGPPGPPGLPGKAGASGFPGTKGEMGM
MGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPAGEKGSKGEPGFPGLPGPMDPNLL
GSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQHGLPGPPGPKGNPGLPGQPGLI
GPPGLKGTIGDMGFPGPQGVEGPPGPPGVPGQPGSPGLPGQKGDKGDPGISGIGLPGLPG
PKGEPGLPGYPGNPGIKGSVGDPGSPGLPGTPGAKGQPGLPGFPGTPGPPGPKGISGPPG
NPGLPGEPGPIGGGGRPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGQPGLQGNPGRPGLNGMK
GDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLTGPPGPPGLPGPSGQSIIIKGDAGPPGI
PGQPGLKGLPGPPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP
PGPDGLQGPPGPPGTSSIAHGFLITRHSQTMDAPQCPQGTLQVYEGFSLLYVQGNKRAHG
QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMQPLKGQGIQPF
ISRCAVCEAPAMVIAVHSQTIQIPRCPQGWNSLWIGYSFMMHTSAGAEGSGQALASPGSC
LEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQV
CMKRT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgttcttactggccctgagtctttgg
gggcagcctgcagaggctgcgacttgctatgggtgttctccagaatcaaagtgtgactgc
agtggcataaaaggggaaaagggagagagagggtttccaggtttggaaggacacccagga
ttgcctggatttcctggtccagaagggcctccaggacctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaaggaatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgacggggccccaggacctcaaggt
gttcctggatgcaatggaacaaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggaccccctgggatcccaggtatgaagggtgaaccaggtagt
ataattatgtcctcactgccaggaccaaagggtaatccgggatatccaggtcctcctgga
atacaaggcctacctggtcccactggtataccagggccaattggtcccccaggaccacca
ggcttgatgggccctcctggtccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaaaggtgaaaagggtgagcaaggtcttcaaggcccacctgggcca
cctgggcagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacctccagggatgcatggtcctcccggtcct
ccaggtggtgtgaaaggtgagaagggtgagcaaggagagccaggcaaaagaggtaaacca
ggcaaagatggagaaaatggccaaccaggaatccccggtttgcctggtgatcctggttac
cctggtgaacccggaagggatggtgaaaagggccagaaaggtgacattggcccacctgga
cctcctggacttgtaattcctagacctggaactggcataactataggagaaaaaggaaac
attgggttgcctggcttgcctggagaaaaaggagagcgaggatttcctggaatacagggt
ccacctggcctccctggacctccaggggctgcagctatgggtcctcctggcccccctgga
tttcctggagaaaggggtcagaaaggtgatgaaggaccacctggaatttccattcctgga
ccccctggacttgatggacagcctggggctcctgggcttccagggcctcctggccctcct
ggccctcacattcctcctagtgatgagctatgtgaaccaggccctccagggcccccggga
tctccaggcgataaaggactccaaggagaacaaggagtgaaaggtgacaaaggtgacact
tgcttcaactgcattggaactggtatttcagggcctccaggtcaacctggtttgccaggt
ctcccaggtcctccaggatctcttggttttcctggacagaaaggtgaaaaaggacaagct
ggagcaactggtcccaaaggattgcccggcattccaggagctccaggtgctccaggcttt
cctggatctaaaggtgaacctggtgatatcctcacttttccaggaatgaagggtgacaaa
ggagagttgggttctcctggagctccagggcttccgggtttacctggcactcctggacag
aatggattgccagggcttcctggcccgaaaggagagcctggcagaattacttctaagggt
gaaagaggtccccctgggaacccaggtttaccaggccacccagggaacatagggcctatg
ggtcctcctggttttggccctccaggcccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggggatccaggtcagaccataacc
cagccaggaaagcctggcttgcctggtaacccaggcagagatggtgaagtaggtcttcca
ggtgaccctggactcccaggacaaccaggcttgccaggaatacctggtagcaaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggctttcctggaatt
ccaggacctccaggagcacctgggacacctggaataactggtctagaaggtcctcctggg
ccacccggctttccaggaccaaagggtgagccaggatttgcagtacctgggccacctgga
cctccaggacttccaggtttcaaaggaacacttggtccaaaaggcgatcgtggtttccca
ggacctccaggtcctccaggacgcactggcttggatgggcttcctggaccaaaaggtgat
gttggaccaagtggacaacctggaccaatgggacctcctgggctgccaggaataggtgtt
cagggaccaccaggaccaccagggattcctgggccaataggccaacctggtttacatgga
atacccggagagaagggggatccaggacctcctggacttgatgttccaggacctccaggt
gaaagaggcagtccagggatccctggagcacctggtcccataggacctccaggaccacca
ggacttccaggaaaagcaggtgcctctggatttccaggtaccaaaggtgaaatgggcatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgttcctggt
cttaaaggtgatgatggcttgcaaggtcagccaggacttcctggccctgcgggagaaaaa
ggtagtaaaggagagcctggctttccaggccttcctggacccatggatccaaatcttctg
ggctcaaaaggagagaagggggaacctggcttaccaggtatacctggagtttcagggcca
aaaggttatcagggtttgcctggagacccagggcaacctggactgagtggacaacatgga
ttaccaggaccaccaggtcccaaaggtaaccctggtctccctggacagccaggacttata
ggacctcctggacttaaaggaaccatcggtgatatgggttttccagggcctcagggtgtg
gaagggcctcctggacctcctggagttcctggacaacctggctccccaggattacctgga
cagaaaggcgacaaaggtgatcctggtatttcaggcattggtcttccaggtcttcctggt
ccaaagggtgagcctggtctgcctggatacccagggaaccctggtatcaaaggttctgtg
ggagatcctggttcgcctggattaccaggaacccctggagcaaaaggacaaccaggcctt
cctggattcccaggaacccctggccctcctggaccaaaaggtattagtggccctcctggg
aaccctggccttccaggagaacctggtcctataggtggtggaggtcgtcctggacaacca
gggcctccaggtgaaaaaggcaaacctggtcaagatggtattcctggaccagctgggcag
aagggtgaaccaggtcaaccaggctttggaaacccaggaccccctggacttccaggactt
tctggccaaaagggtgatggaggattacctgggattccaggaaatcctggccttccaggt
ccaaagggcgaaccaggctttcatggtttccctggtgttcagggtcctccaggccctcct
ggttctccgggtccagctctggaaggacctaaaggcaaccctgggccccaaggtcctcct
gggagaccaggtctaccaggtccagaaggtcccccgggtctccctggaaatggaggtatt
aaaggagagaaggggaacccaggccaacctgggctacctggtttgcctggtttgaaagga
gatcaaggacaaccaggactccagggtaatcctggccggccgggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggattcccaggcatgaaaggacccagtggagta
cctggatcagctggccctgagggagaaccaggacttactggtcctccaggtcctcctgga
ttacctggtccttcaggacagagtattataatcaaaggagatgctggtcctccaggaatc
ccaggccagcctgggttaaaaggtctaccaggacccccaggacctcaaggtttaccaggt
ccaattggtcctccaggagatcctggacgcaatggactccctggctttgatggtgcagga
gggcgcaaaggagacccaggtcttccaggacagccaggtacccgtggtttggacggtccc
cccgggccagatggattgcaaggtcccccaggtccccctggaacctcatctattgcgcat
ggatttcttattacacgccacagccagacaatggatgcgccacagtgcccgcagggaaca
cttcaggtctatgaaggcttttctctcctgtatgtacaaggaaataaaagagcccatggt
caagacttggggacggctggcagctgccttcgtcgttttagtaccatgcctttcatgttc
tgcaacatcaataatgtttgcaactttgcttcaagaaatgactattcttactggctctct
accccagagcccatgccaatgagcatgcaacccttaaagggccagggcatccagccattc
attagtcgatgtgcagtatgtgaagccccagccatggtgatcgcagttcacagtcagacg
atccagattccccgttgtcctcagggatggaattctctgtggattggttattccttcatg
atgcatacaagtgcaggagcagaaggctcaggtcaagccctagcctcccctggttcctgc
ttggaagagtttcgttcagctcccttcatcgaatgtcatggaaggggtacctgtaactac
tacgccaactcctacagcttttggctggcaactgtagatgtgtcagacatgttcagtaaa
cctcagtcagaaacgctgaaagcaggagacttgaggacacgcattagccgatgtcaagtg
tgcatgaagaggacataa
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integrated database retrieval system
