Callithrix jacchus (white-tufted-ear marmoset): 100410052
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Entry
100410052 CDS
T03264
Symbol
ZFR
Name
(RefSeq) zinc finger RNA-binding protein isoform X2
KO
K13203
zinc finger RNA-binding protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjc03041
]
100410052 (ZFR)
Spliceosome [BR:
cjc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100410052 (ZFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_N
DZF_C
zf-met
zf-C2H2_jaz
zf-U1
Motif
Other DBs
NCBI-GeneID:
100410052
NCBI-ProteinID:
XP_002745129
Ensembl:
ENSCJAG00000018740
UniProt:
U3F435
LinkDB
All DBs
Position
2:169583877..169672317
Genome browser
AA seq
1074 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKMATGNYFGFTHSGAAAAAAAAQYSQQPASGVAYSHPTT
VASYTVHQAPVAAHTVTAAYAPAAATVAVARPAPVAVAAAATAAAYGGYPTAHTATDYGY
TQRQQEAPPPPPPATTQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPS
VAETYYQTAPKAGYSQGATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAA
ATVVPSYTQSATYSTTAVTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQAAAAAAAAAAT
AAWTGTTFTKKAPFQNKQLKPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEA
ALKASQNTSSSNNSTRGTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPI
PSTEPNVVSQATSSTAVSASKPTASPSSIAANNCTVNTSSIATSSMKGLTTTGNSSLNST
SNTKVSAVPTNMAAKKTSTPKINFVGGNKLQSTGNKTEDLKGTECVKSTPVTSAVQIPEV
KQDTVSEPVTPASLAALQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMH
LKGRRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMR
RYEEDMYWRRMEEEQHHWDDRRRMPDGGYPHGPPGPLGLLGVRPGMPPQPQGPAPLRRPD
SSDDRYVMTKHATIYPTEEELQAVQKIVSITERALKLVSDSLSEHEKNKNKEGDDKKEGG
KDRALKGVLRVGVLAKGLLLRGDRNVNLVLLCSEKPSKTLLSRIAENLPKQLAVISPEKY
DIKCAVSEAAIILNSCVEPKMQVTITLTSPIIREENMREGDVTSGMVKDPPDVLDRQKCL
DALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSDFPSWAMELLVEKAISSASS
PQSPGDALRRVFECISSGIILKGSPGLLDPCEKDPFDTLATMTDQQREDITSSAQFALRL
LAFRQIHKVLGMDPLPQMSQRFNIHNNRKRRRDSDGVDGFEAEGKKDKKDYDNF
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgccctgtagtttcttttacctatgtgcccagccggctgggggaagat
gccaaaatggcgaccggcaactactttggattcacccacagcggggcggcggcggcggcg
gctgcggcccaatatagccagcagcctgcttcgggtgtagcctattctcatccaactaca
gttgctagctacactgtccatcaggctccagtagctgctcacacagttactgccgcctat
gcaccagcagccgccacagttgcagttgccaggcctgctccagtagctgttgcagctgct
gcaacagctgctgcttatggaggctaccccactgcacacacagcaactgactatggttat
acccagaggcaacaagaagcaccaccaccaccacccccagctactacacaaaactaccag
gactcatactcatatgtaagatccacagcgcctgctgtagcttatgatagtaagcagtac
taccaacaaccaacagcaactgctgctgctgtagctgccgctgcccaacctcagccttct
gttgctgaaacttactatcaaacagcccccaaagcaggttatagccaaggtgcaactcag
tatactcaagcccagcaaactcgacaagtgacagccataaaaccagccacaccaagtcca
gctaccactactttctccatctatcctgtatcctccactgtacagccagtggcagctgcg
gcaactgtggtgccatcctatactcagagtgctacttacagtaccacagcagttacttat
tctggtacgtcttattcaggttatgaagcagcagtgtattcagctgcatcttcctactat
caacagcagcagcagcaacagaagcaggcagcagcagcagctgctgctgctgctgcaaca
gccgcctggacagggaccacctttactaaaaaagcaccattccaaaataaacaactgaaa
ccaaaacagcctcccaaaccaccacagattcactattgtgatgtttgtaagatcagctgt
gctggaccacagacttataaagaacacttagaaggacagaaacataaaaaaaaagaagct
gcattgaaagcctcacaaaataccagcagcagcaacaattctactcgtgggactcaaaat
cagctacgttgtgagctctgcgatgtgtcttgtacaggagcagatgcatatgctgcccac
attcgtggcgctaagcatcagaaagtggttaagttacacacaaaacttggtaaacccatt
ccatcaacagaaccaaacgttgttagccaagctacttcttcaacagctgtgtctgcttca
aagccaactgcctctccttcaagcattgcagcaaacaattgtactgtgaatacttcatca
attgcaacgtcttcaatgaagggtcttacaactacaggaaactcatctcttaatagcaca
tctaacactaaagtatcagcagtgcctacaaatatggctgccaagaaaacatctaccccc
aaaataaattttgttggtggtaataagctgcagtcaacaggaaataaaacagaagactta
aaaggaactgaatgtgttaaaagtactcctgtcacttctgctgtgcagattcctgaagta
aagcaagacacagtgtcagaaccagtcacacctgcatctcttgctgcattacagagtgat
gtgcagccagtaggccatgattatgtggaggaggtacgaaacgatgaaggaaaagtaatt
cgcttccattgtaaattatgtgagtgcagctttaatgatcccaatgctaaggagatgcac
ttaaaagggcgaagacacagacttcaatataaaaaaaaagtaaatccagatttgcaagta
gaagtaaagcctagtattcgagcaagaaagattcaagaagagaaaatgagaaagcaaatg
cagaaggaggagtactggcgaaggcgagaagaggaggaacgttggagaatggaaatgaga
cgttatgaagaggatatgtactggagaagaatggaggaagaacagcatcattgggatgat
cgccgccgaatgccagatggaggttatccccatggtcctccaggccctttaggccttctg
ggagttcgaccaggcatgcctcctcagcctcaggggcctgcacccttacgtcgtcctgac
tcatctgatgaccgttatgtaatgacaaaacatgccaccatttatccaactgaagaggag
ttacaggcagttcagaaaattgtttctattactgaacgtgctttaaaacttgtttcagac
agtttgtctgaacatgagaagaacaagaacaaagagggagatgataagaaagagggaggt
aaagacagagctttgaaaggagttttgcgagtgggagtattggcaaaaggattacttctc
cgaggagatagaaatgtcaaccttgttttgctgtgctcagagaaaccttcaaagacatta
ttaagccgtattgcagaaaacctacccaagcagcttgctgttataagccctgagaagtat
gacataaaatgtgctgtatctgaagcagcgataattttgaattcatgtgtggaacccaaa
atgcaagtcactatcaccctgacatctccaattattcgagaagagaacatgagggaagga
gatgtaacctcgggtatggtgaaagacccaccggacgtcttggacaggcaaaaatgcctt
gacgctctggctgctctacgccacgctaagtggttccaggctagagctaatggtctgcag
tcctgtgtgattatcatacgcattcttcgagacctctgtcagcgagttccaacttggtct
gattttccaagctgggctatggagttattagtagagaaagcaatcagcagtgcttctagc
cctcagagccctggggatgcactgagaagagtttttgagtgcatttcttcagggattatt
cttaaaggtagtcctggacttttggatccttgtgaaaaggatccctttgataccttggca
acaatgactgaccagcagcgtgaagacattacatccagtgcacagtttgcattgagactc
cttgcattccgccagatacacaaagttctaggcatggatccattaccgcaaatgagccaa
cgttttaacatccacaacaacaggaaacgaagaagggatagtgatggagttgatggattt
gaagctgaagggaaaaaagacaagaaagattatgataacttttaa
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integrated database retrieval system
