Callithrix jacchus (white-tufted-ear marmoset): 100410099
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Entry
100410099 CDS
T03264
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X2
KO
K16578
CLIP-associating protein 1/2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100410099 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cjc04812
]
100410099 (CLASP1)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100410099 (CLASP1)
Cytoskeleton proteins [BR:
cjc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
100410099 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_2
RTP1_C1
Adaptin_N
HEAT_DAAF5
MMS19_C
ParcG
TAN
Motif
Other DBs
NCBI-GeneID:
100410099
NCBI-ProteinID:
XP_035161018
Ensembl:
ENSCJAG00000013398
LinkDB
All DBs
Position
6:complement(102409746..102699378)
Genome browser
AA seq
1507 aa
AA seq
DB search
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQSLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSTSSKALPSSRRNVGMGTTRRLGSSTLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRGSTVSTKSVSTTGSLQRSRS
DIDVNAAASAKSKVSSSSGTAPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPSDN
RGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSSYGGLAGGSSRGPPVTPSSEKRSK
IPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFPPLDRFGLG
QPGRIPGSVNAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDA
SSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLSR
VELKRLCEIFTRMFADPHSKVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLL
GSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPT
DFVNSSETRLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDG
ATKLLHNHLKNSSNTSVGSPSNTIGRTPSRHTSSRTSPLTSPTNCSHGGLSPSMLDYDTE
NLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKECDIVSRDGGAASPATEGRRG
SEVEGGRTALDNKTSLLNTQPPRAFPGPRAREYNPYPYSDAINTYDKTALKEAVFDDDME
QLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTILLLL
LETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRVAEEAA
STLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERIAKELLLQLLADIIPGLLQ
GYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSS
SDVSTHS
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgcatggagtcctgcctggcgcaggtgttgcagaaggatgttgggaaacga
ttgcaggttggccaagaactgatagactatttctcagataaacagaagtctgctgacctt
gagcatgaccagaccatgttagataaacttgtggatggacttgctacctcttgggtgaac
tctagcaattacaaggtggttctgctgggcatggacatcctgtccgccctcgtgacccgg
ctgcaggatcggttcaaggcgcagatcggcacagtgctgccaagtctaatagacagacta
ggagatgctaaagactctgtgagggagcaggaccaaactctgctgctaaagatcatggat
caagctgctaatccccagtacgtatgggacagaatgcttggaggcttcaaacacaagaat
ttccgtactcgagaaggcatctgtctctgccttatagcaacactcaatgcctctggagca
cagagtttaacactaagcaagattgtgccacatatatgcaacttacttggagatccaaac
agccaggttcgagatgcagcaataaacagcttagtggaaatttacagacatgtaggagaa
cgtgtgagggcagatctcagtaaaaaaggattgccacagtcccggttgaatgtaattttt
acgaaatttgatgaagtccagaaatctggaaacatgatacaatctgcaaatgataaaaat
tttgatgatgaagattctgtggatggtaacagaccttcctccgctagttctacgtcatcc
aaggctctaccaagttctcggagaaacgtcggaatgggaaccacccgccggcttggttca
tccacccttggatccaagtcttcagctgcaaaagaaggagctggtgctgttgatgaagag
gattttattaaagcatttgatgatgtacctgtagtacagatttattccagccgagacctt
gaggaatccataaacaaaattagggaaatattatctgatgacaagcatgattgggagcag
agagtaaatgctctaaaaaagattagatctttacttttggctggtgctgctgagtatgat
aacttctttcaacatttgcgtcttttggatggagcctttaaactctctgctaaggatctg
cggtctcaggtagtgcgggaggcttgtatcacgttggggcatctgtcatcagttctgggg
aataagtttgaccatggagccgaagccattatgccaactatatttaatttaattccaaac
agtgccaaaattatggccacgtctggtgttgtagctgttaggttaattattcggcacaca
cacatccctaggttaatacctgtcataacaagcaactgtacctctaagtccgtcgcagtt
agaaggcgctgttttgaatttttagatttgcttttacaagaatggcagacacattcacta
gaacgacacatatcagtattagcggaaacaataaagaagggaatacatgatgccgattct
gaagcaagaatagaagccagaaaatgttactggggtttccacagtcacttcagcagagaa
gcagagcacttataccacaccctggagtcctcctaccagaaagccctgcagtcccacctg
aagaactcagacagcattgtgtctctgcctcagtctgaccgctcgtcttccagctctcaa
gagagtctaaatcggccgctgtctgccaaaagaagtcctactggaagtaccacgtctaga
ggttctacagttagtaccaaatctgtgtcaacgactgggtcccttcagcgatctcgaagt
gacattgatgtgaacgcagcagccagtgccaaatccaaagtctcctcatcttcgggcacg
gcgcctttcagctccgcagcggctttgcctccagggtcatacgcatccttaggtcggatc
cgcacaagacggcaaagctctgggagtgccaccaatgtcgcctctacaccttctgataac
cggggccgcagtcgcgctaaagtggtttcacagtcccagcgatccagatctgctaatcct
gctggtgctggcagccggtcaagttctccaggaaaattgttgggaagtagttatggtgga
cttgctgggggctcctcacgaggcccacctgtgacaccatcttcagaaaagcgaagcaag
attcccaggagccagggatgtagccgggaaacaagtccaaaccgaataggattagcacgg
agcagccgtatccctcgacccagcatgagtcaggggtgcagccgcgataccagccgtgag
agcagccgagatacaagccctgctcggggctttcctccacttgatcggtttgggcttggc
cagccaggaagaatacctggttctgtgaatgccatgagagttttgagcacaagtacagac
cttgaagctgctgttgctgatgctttgctgttaggagactccaggagcaagaagaagcct
gtgaggaggaggtatgagccgtatgggatgtattctgacgatgacgccaacagtgatgcc
tcaagtgtttgctctgagcgctcatatggctccaggaatggtggcattccccattatctg
cggcagactgaggatgtagcagaagttctcaaccactgtgctagttcaaactggtcagaa
aggaaagaagggcttctgggcctgcagaacctactgaagagccaaagaacactgagtcga
gttgaactgaaaagattgtgtgagattttcacccggatgtttgccgatcctcatagcaag
gttttcagtatgtttttggagactcttgtggattttataataattcataaggatgacttg
caagactggctttttgttcttctcacacaattacttaagaaaatgggagcagatttactt
ggatctgtgcaagcaaaagtccaaaaggctctagatgtcaccagggactcctttccattt
gatcaacaatttaacattttgatgagatttattgtggatcaaactcaaactccaaacctc
aaggtcaaagttgcaatcctgaaatatattgagtctctggccagacagatggatccaaca
gattttgtaaactctagtgagacaaggcttgctgtttctagaatcataacctggacaaca
gaaccaaagagttcagacgtgagaaaggcagcacaaattgtgctaatctctctgtttgaa
ttgaatactcctgaatttaccatgttacttggtgccttgccaaaaacattccaggatggt
gccaccaaactcctgcataaccacctcaagaattccagtaacaccagtgtgggctctcca
agcaatacgattggccgaacaccttcccgacacaccagcagcaggaccagccccctgacc
tcacctaccaactgttcccatgggggtctgtctccaagcatgctggactatgatacagag
aacctgaactctgaagaaatctatagttctctacgtggagttacagaagccattgaaaag
tttagttttcgaagccaagaagatctgaatgaaccaattaaacgagatggcaaaaaggag
tgtgatattgtgtcccgcgatgggggcgctgcctctcctgccaccgagggccgcaggggc
agcgaggtagaaggaggccggacagctctggataacaagacctcgctactcaacacccag
cctccgcgtgccttcccggggccgcgggcgcgagagtacaacccgtacccctactcagat
gccatcaacacctacgacaagactgccctgaaggaggctgtgttcgatgacgacatggag
cagcttcgagacgtgcccatcgaccattctgacctggtggctgaccttctgaaagagctg
tccaaccacaacgagcgggtggaggaacggaaaggagccctgctggagctgctcaaaatc
acacgggaagacagccttggcgtctgggaggagcacttcaagaccattctgctcctgctg
ctagagacccttggagacaaagaccattcaattcgagcactggcgttgagagttttgagg
gaaattctgagaaatcaaccagcaagatttaaaaactacgctgagctgacgattatgaag
actctggaagcccacaaagactcccataaggaggtggtgagagtggctgaggaggctgcg
tccacactagccagttccatccacccagagcagtgcatcaaggtgctctgccccatcatc
cagacggcggactatcccatcaaccttgctgccatcaagatgcagaccaaagtcgtcgag
aggatcgccaaggagttgttgctgcagctcctcgccgacatcatcccaggcttgctgcag
ggttatgacaacactgaaagtagtgtgcgtaaggccagtgtgttttgcttagtggcaatt
tattccgtaatcggagaagacctgaaacctcacctcgcacagctcacagggagcaagatg
aagctactaaacttatatataaagagggcccagaccaccaacagcaacagcagctcctcc
tccgatgtctccacgcacagctaa
DBGET
integrated database retrieval system
