Callithrix jacchus (white-tufted-ear marmoset): 100410161
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Entry
100410161 CDS
T03264
Symbol
PCDHB5
Name
(RefSeq) protocadherin beta-5
KO
K16494
protocadherin beta
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100410161 (PCDHB5)
Cell adhesion molecules [BR:
cjc04515
]
Cadherins
Protocadherins
100410161 (PCDHB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100410161
NCBI-ProteinID:
XP_035142614
UniProt:
A0A8I3WEM0
LinkDB
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Position
2:37563860..37571091
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AA seq
795 aa
AA seq
DB search
METALAKTPRKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVGNLAKDLGLGVEELA
TRGARIHYKGNKELLQLDIKNGNLLLYKKLDREVLCGATEPCILHFQLLLENPVQFFQAD
LQLADINDHSPEFPEREMLLKISEGTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV
ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTVRIVVLDNNDNAP
EFLQSLYEVQVPENSPLNSLIVAVSARDVDAGAYGTVAYALFQGDEVTQPFVVDQITGEI
RLKRALDFEATPYYNLEIVATDGGGLSGKCTVAIEVVDVNDNAPELTLSTLSSPTPENAP
ETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTFKNFYTLVTQRKLDRESQAEYNITI
TVSDLGTPRLKTEYNITILVSDVNDNAPAFTQTSYTLFVRENNSPALHIGTVSATDRDSG
TNAQVTYSLLPLQDTHMPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPAL
SSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAW
LSFQLLKATEPGLFGVWAHNGEVRTARLLSEREAAKHRLLVLVKDNGEPPRSATATLHVL
LVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAAS
VGGCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLSGGSGTNEFKFLKPIIPNFLPQGTGD
EVGKTAAFRNSFGFN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcgctagcaaaaacgccacggaaaaggcaagttatgtttcttgctatactg
ttgcttttgtgggaggctggctctgaggcagttaggtattccataccagaagaaacagaa
agtggttattctgtgggcaaccttgcaaaagacctgggtctcggggtggaggaactggcc
actcggggcgcgcgaatccattacaaaggaaacaaagagctcttgcagcttgatataaag
aacggcaatttgcttctatataaaaaactagaccgggaggtgttgtgcggggcgacagaa
ccttgtatattgcatttccaactcttactagaaaacccagtgcagttttttcaagctgat
ctgcagctcgcagatataaatgaccattctccagagttcccagagagggaaatgctccta
aaaatctcagagggcacccagcctgggactgtgtttcctttgaaaatagcacaggacttt
gacataggtagcaacactgttcagaactacacaatcagccccaattcccactttcatgtg
gctactcataatcgcggagacggcagaaaatacccagagctggtgctggacaaagcacta
gaccgggaggagagacctgagctcagcttaacactcacggcactggatggtggggctccg
cccaggtccgggaccaccacagttcgcattgtcgtcttggacaataatgacaacgccccc
gaatttttacaatccctctatgaggtacaggttcctgagaacagcccccttaactcctta
attgtcgccgtctctgcccgagatgtagatgcaggagcgtatgggactgtagcctatgct
ctatttcaaggtgacgaagttactcaaccatttgtagtagaccaaataacaggagaaata
cgcctgaaaagggcattggatttcgaggcaactccatattacaacttggaaattgtagcc
acagatggtgggggcctttcgggaaaatgcactgtggctatagaagttgtggatgtgaac
gacaacgcccctgaactcaccttgtcgacgctctccagccctaccccagaaaacgccccg
gaaactgtagttgctgttttcagtgtttctgatccagactccggggacaacggtaggatg
atttgctccatccagaacgacctcccctttcttttgaagcccacattcaagaacttttac
accctcgtgacacagagaaaactggacagagagagccaagctgagtacaacatcaccatc
accgtcagtgacttggggacacccaggctgaaaaccgagtataacataaccattctggtc
tccgacgtcaatgacaacgcccccgccttcactcaaacctcctacaccctcttcgtccgc
gagaacaacagccccgccctgcacatcggcaccgtcagcgccacagacagagactcaggc
accaacgcccaggtcacctactcgctgctgccgctccaggacacgcacatgcccctcgcc
tccctggtctccatcaacgcggacaacggacacctgttcgccctccggtcgctggactac
gaggccctgcaggcgttcgagttccgcgtgggcgccacagaccgcggctccccggcgctg
agcagcgaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgcccttcgtg
ctgtacccgctgcagaacggctccgcgccctgcaccgagctggtgccccgggcggccgag
ccgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgttccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaat
ggcgaggtgcgcaccgccaggctgctgagcgagcgcgaagcggccaagcacaggctgctg
gtgctggtcaaggacaatggcgagcctccgcgctcggccaccgccacgctgcacgtgctc
ctggtggacggcttctcccagccctacctgccgctcccggaggcggccccggcccaggcc
caggccgactcgctcaccgtctacctggtggtggcgttggcctcggtgtcgtcgctcttc
ctgttctcggtgctcctgttcgtggcggtgcggctgtgcaggaggagcagggcggcctcg
gtgggtggctgctcggtgcccgagggcccgtttccagggcatctggtggacgtgagcggc
accgggaccctgtcccagagctaccagtacgaggtgtgtctgtcgggaggttccgggaca
aatgagttcaagttcctgaagccgattatccccaactttttgccccagggcactggtgat
gaagtagggaaaactgcagccttccggaatagctttggattcaactag
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