Callithrix jacchus (white-tufted-ear marmoset): 100410213
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Entry
100410213 CDS
T03264
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
100410213
Domain-containing proteins not elsewhere classified [BR:
cjc04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
100410213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_D2
THSD1_N
THSD1_D3
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
100410213
NCBI-ProteinID:
XP_035153162
Ensembl:
ENSCJAG00000007654
LinkDB
All DBs
Position
1:complement(62613999..62615622)
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AA seq
852 aa
AA seq
DB search
MKPMLKDFSNLLLMVLCDYVLGEAEYLLLREPGHVALSNDTVHVDFQYFDGANGTLRNVS
VLLLEANTNQTVTTKHVLTNQSQGTLTFECFYFKEAGNYWFTMSPEATDTSTPFPWWEKS
AFLKVEWPAFHVDLNRSSKAAEGTFQVGLFTSQPLCPFPVDKPAITVDVIFTNSLPESRR
NSGQPLEIRTSKRTELAQGQWVEFGCAPVGTEAYVTVVLKLLGRDSVITSTGPIDLVRKF
GYKLMMVPELTCESGVEVTVLPPPCTFVQGVVTVFKEAPRSPGKRTTHLAVNSLPLGERR
TVFNCTLFDMGRNKYCFDFGISSTSHFSAKEECMLIQRSIETWGLWQPWSQCSTTCGDGV
RERRRECLTSFPTRPGCPGMPLETSLCSLEECAAFQPSSPSPLQPQGPAKSNSIVTVTGI
SLCLFIIIATVLITLWRRFGRPAKCSTPARRSSLHSPGFRKNSDEENICELSEQRGSFSD
GGDGPTGSPGDTGIPLTYRRSGLGPPEDDASGSESLQSNAQKIIPPLFSYRLAQQQLKEM
KKKGLTETTKVYHVSQSPLTDTAIDAAASAPLDLESPEEAAANKFRIKSPFLEQPAVSAG
ERPPSRPDLSVTQASCAISPSQTLIRKSQARHVGSRGGPSERSHARNAHFRRTASFHETR
QARPFRERSMSTLTPRQTPAYSSRTRTWEQTDDRSRPPSRDAHLFPERLEHSHGAGGTGG
PLSPLPKCYTLGQPLGKPDLGDRQAGLVAGTERTEPHRARRGPSPSHKSISRKQSSPISP
KDSYQRVSPLSPSQCWKDKCQSFPAHPEFAFYDNTSFGLTEAEQRMLDLPGYFGSNEEDE
TTSTLSVEKLVI
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatgttgaaagacttttcaaatctattgttgatggtgctctgtgactatgtt
cttggagaagctgagtatcttctcttgagagagccaggccatgtagccctcagcaatgat
accgtgcatgtggatttccagtattttgatggtgctaatgggacgctgaggaatgtgtct
gtcctgctgttggaggccaacaccaatcagaccgtaactaccaagcacgtcctgaccaac
cagtcccagggaacactcacgtttgaatgcttctatttcaaggaggctggtaactactgg
ttcacaatgagtccagaagcaacagacaccagcactccattcccctggtgggagaagagt
gcctttctgaaggtggaatggcctgcctttcatgttgacttgaacaggagctccaaggca
gcagaaggcaccttccaagtgggcctgtttaccagtcaaccactgtgcccatttcctgtg
gacaagcctgccatcacagtggatgtcatcttcaccaacagtcttcctgagtcaaggaga
aattcaggacagccactggaaataagaaccagcaaaaggacagaacttgctcaaggtcag
tgggttgagtttggctgtgcacctgtggggacggaagcctatgtcactgtagtgctgaag
ctgcttgggcgagactcagtcattacctccacaggacccattgacctggtccggaaattt
ggatacaaactgatgatggtgccagaactcacatgcgagtccggggtggaggtgacggtg
ctgcctccaccatgcaccttcgtccaaggagtagtcactgtcttcaaggaggcccccaga
tcccctgggaagaggaccactcatttggctgttaacagcctgcccctgggagagaggagg
accgtttttaactgtactttgtttgacatggggaggaataagtactgctttgactttggc
atttcaagcacaagccacttttctgcaaaggaggagtgcatgctaattcagagaagtata
gaaacttggggactgtggcagccgtggagccagtgtagcaccacatgtggggatggtgtc
agagagcgtcgccgagagtgtctcacttccttcccaaccagacccggctgccctggaatg
cccttggagacctccctgtgttccctggaggagtgtgctgctttccagccatccagccca
tctcctcttcagccccagggtccagcaaagtccaacagcatcgtgactgtcactggcata
tccctgtgcctgttcatcatcattgccaccgtgctcatcacgctgtggaggaggttcggc
cgccccgccaagtgcagcacccctgctcgacgcagctccctccactcccccggtttccgg
aagaactcggacgaggagaacatctgcgagctgagcgagcagcgcgggagcttctcagat
gggggagacgggcccacggggagtccgggggacacgggcatccctctgacctacaggcgg
agcgggctggggcctcccgaggacgatgcctctggcagcgagagcctccagtccaacgcc
cagaagataatcccccctctgttcagctaccgcctcgcccagcagcagttaaaggagatg
aaaaagaaaggtctgacggaaaccacgaaagtgtaccacgtgtctcagagtcccctgaca
gacactgccattgacgcggccgccagcgcccccttagacttggaaagcccagaagaagct
gcagcaaacaagttccggatcaaatccccatttctggagcagcctgcggtcagcgctggg
gaaaggcctccctccaggccggatctaagtgtgacgcaggccagttgtgccataagcccc
agccagactctgatccgcaagtcacaggcgaggcacgtgggcagcagagggggcccgtcc
gagaggagccatgccaggaacgcgcatttcaggaggacagcgagtttccatgaaaccagg
caggcccggccgttccgagagaggagcatgtccactctgactccacggcagacgcccgcc
tacagctctaggacgcggacctgggagcagacagacgacagatctaggcctccgagtcga
gacgcccacctgtttcctgagaggctggagcattcccatggggcaggtggaaccggtggc
ccattaagccctctccctaaatgctacactttggggcagcccttgggaaaaccagacctt
ggggatcgccaggcaggattagtggcaggaactgagagaacagagcctcacagagctcgt
cggggaccgtcccccagtcacaagagtatctcaaggaaacagtcttctcccatatccccc
aaagatagctaccagagggtcagtcctctgagcccttctcagtgttggaaagacaagtgt
caaagcttcccggctcaccccgagtttgccttctatgacaatacgtcatttggcctcact
gaggctgagcagaggatgctggacctcccaggatattttgggtcaaatgaagaggatgaa
accacaagtacacttagcgtggagaagctggtaatctag
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