Callithrix jacchus (white-tufted-ear marmoset): 100410389
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Entry
100410389 CDS
T03264
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040
Spliceosome
cjc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100410389
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100410389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100410389
03041 Spliceosome [BR:
cjc03041
]
100410389
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100410389
mRNA cycle factors
Common to processing body (P body) and stress granule
100410389
Spliceosome [BR:
cjc03041
]
Common components
Common spliceosomal components
hnRNP proteins
100410389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
100410389
NCBI-ProteinID:
XP_017828577
Ensembl:
ENSCJAG00000023392
LinkDB
All DBs
Position
1:89834564..89838011
Genome browser
AA seq
320 aa
AA seq
DB search
MSKSESPEEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTYCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDRRVVEPKRAVSREDSQRPGAHLTVKNIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMMDRGSGKKRGFAFVTFDNHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGDCGGGFGGNDSFGRGGNFSGRGGFGGSHGGGGYGGS
GDGYNGYGNDGGNFGGGGSYNDFGSYNNQSSNFGPMKGGNFGGSSSGPYGGGSQYFAKPR
NQGGYGGSSSSSSYGSGRRF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcagagtctcctgaagagccggaacagctgaggaagctcttcattggaggg
ttgagctttgaaacaaccgatgagagcctcaggagccattttgagcaatggggaacgctc
acatactgtgtggtcatgagagatccaaacaccaagcgctccaggggctttgggttcgtc
acgtatgcaactgtggaggaggtggatgcagccatgaatgcaagaccacacaaagtggat
agaagagttgtggaaccaaagagagctgtctcaagagaagattctcaaagaccaggtgcc
cacttaactgtgaaaaatatattcgttggtggcattaaagaagacactgaagaacatcac
ctaagagattattttgaacagtatggaaaaattgaagtgattgaaatcatgatggacaga
ggcagtggcaagaaaaggggctttgcctttgtaacctttgacaaccatgactccgtggat
aagattgtcattcagaaataccatactgtgaatggccacaactgtgaagttaggaaagcc
ctgtcaaagcaagagatggctagtgcttcatccagccaaagaggtcgaagtggttctgga
aactttggtggtgattgtggaggtggtttcggtgggaatgacagctttggtcgtggagga
aatttcagtggtcgtggtggctttggtggcagccatggtggtggtggatatggtggcagt
ggggatggctataatggatatggtaatgatggaggcaattttggaggtggtggaagctac
aatgattttggcagttacaacaatcagtcttcaaattttggacccatgaagggaggaaac
tttggaggcagcagctctggcccctatggtggtggcagccaatactttgccaaaccacga
aaccaaggtggctatggcggttccagtagcagcagtagctatggcagtggcagaagattt
taa
DBGET
integrated database retrieval system
