Callithrix jacchus (white-tufted-ear marmoset): 100410432
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Entry
100410432 CDS
T03264
Symbol
LRRC8E
Name
(RefSeq) volume-regulated anion channel subunit LRRC8E isoform X2
KO
K22038
volume-regulated anion channel
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjc04040
]
100410432 (LRRC8E)
Ion channels [BR:
cjc04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
100410432 (LRRC8E)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_LRWD1
LRR_9
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
100410432
NCBI-ProteinID:
XP_035140110
Ensembl:
ENSCJAG00000006077
LinkDB
All DBs
Position
22:7039978..7064642
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AA seq
884 aa
AA seq
DB search
MSHRAGPPLFLDKIPRRPEQGRPGCACGEAGPSRPGAGRDGAAPGLLSPPALTHPRGPPR
NSAGVPAAPLCRFQGSRSWAQRPSRNSSMIPVAEFKQFTEQQPAFKVLKPWWDVLAEYLT
VAMLMIGVFGCTLQVTQDKIICLPNHEPQENLSEAPCQQLLPRGVPEQMGALQEVKGLKN
NLDLQQYSFINQLCYETALHWYAKYFPYLVVIHTLIFMVCTSFWFKFPGTSSKIEHFISI
LGKCFDSPWTTRALSEVSGENQKGPAAAGRATATVAAMAGAGPGKAGEGEKEKVLVEPEK
VVTEPPVVTLLDKKEGEQAKALFEKVKKFRMHVEEGDILYTMYIRQTVLKVCKFLAILVY
NLVYVEKISFLVACRVETSEVTGYASFCCNHTKAHLFSKLAFCYISFVCIYGLTCIYTLY
WLFHRPLKEYSFRSVREETGMGDIPDVKNDFAFMLHLIDQYDSLYSKRFAVFLSEVSESR
LKQLNLNHEWTPEKLRQKLQRNAGGRLELALCMLPGLPDTVFELGEVESLRLEAICDITF
PPGLSQLVHLQELSLLHSPARLPFSLQVFLRDHLKVMRVKCEELREVPLWVFGLRSLEEL
HLEGLFPQELARAATLESLRELKQLKVLSLRSNAGKVPASVTDVAGHLQRLSLHNDGARL
VALNSLKKLVALRELELVACGLERIPHAVFSLGSLQELDLKDNHLRSIEEILSFQHCRKL
VTLRLWHNQIAYVPEHVRKLKSLEQLYLSYNKLETLPSQLGLCSGLRLLDVSHNGLHSLP
PEVGLLQNLQHLALSYNALDALPDELFFCRKLRTLLLGDNQLTQLSSQVGALRALSRLEL
KGNRLEMLPEELGNCGGLKKAGLLVEDTLYQGLPAEVRDKMEEE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacagagccggacctccactctttcttgacaagatcccgcggcgcccggagcag
ggtcgacctgggtgcgcctgcggcgaggcggggccgagtcgtccgggggcggggcgggac
ggggcagctcccgggctcctgtccccgcctgccctgactcaccctcgcggcccgcccagg
aactctgcgggagtcccggctgctccgctttgccgctttcagggatccaggagttgggcc
cagcgtccctcccggaatagcagcatgatccctgtggccgagttcaagcagttcacggaa
cagcagcctgcattcaaggtgctcaaaccctggtgggacgtgctggccgagtacctaact
gtggccatgctcatgatcggggtctttggctgtaccctccaggtaacacaggacaaaatc
atctgtctgcccaatcatgagccccaggagaacttatcagaggccccgtgccagcagttg
ctgcctcgcggggtccctgagcagatgggggccctgcaggaggtgaaaggccttaagaac
aacctggacctgcagcagtacagcttcattaaccagctgtgctatgagacggccttacac
tggtacgccaagtacttcccctatcttgtggtcattcacacactcatcttcatggtctgc
accagcttctggttcaagttccctggcaccagctccaagatcgaacacttcatctccatc
ctgggcaagtgtttcgactctccatggaccacaagggccctgtccgaggtctccggggag
aaccagaagggcccagctgctgctggacgggccacagcaactgtagcagccatggcaggg
gccgggccagggaaggcaggggaaggtgagaaggagaaagtgctggtggaaccagagaag
gtggtgaccgagcctccggttgtcaccctgctggacaaaaaggagggtgagcaagccaaa
gccctgtttgagaaggtgaagaagttccgcatgcacgtggaggagggcgacatcctgtac
accatgtacatccggcagacggtgctgaaggtgtgtaagtttctggccatcctggtctac
aacctggtctatgtggagaagatcagtttcctggtggcctgcagggtggagacgtcggag
gtcacgggctatgccagcttctgctgcaaccacaccaaggcccacctcttctccaagctg
gccttctgttacatctccttcgtgtgcatctatgggctcacctgcatctacacgctctac
tggctcttccatcggcccctcaaggagtactccttccgttccgtccgggaggagactggc
atgggggacattcccgacgtcaagaatgacttcgccttcatgctgcacctcattgatcag
tacgactcgctctactccaagcgctttgccgtcttcctgtccgaggtcagcgaaagccgc
ctaaagcagctcaatctcaaccacgagtggacgcccgagaagcttcggcagaagctgcag
cgcaacgcggggggccggctggagctggccctctgcatgcttccgggactgcccgacact
gtcttcgagctcggtgaggtggagtcgctcaggctggaggccatctgtgatatcaccttc
cccccggggctgtcgcaactggtgcacttgcaggagctcagcttgctccactcgcctgcc
aggctacccttctccttgcaggtcttcctgcgggaccacctgaaggtgatgcgtgtcaaa
tgtgaggagctccgcgaggtgccgctttgggtgtttgggctgcgcagcttggaggagctg
cacctggaggggctcttcccccaggagctggctcgggcagccaccctggagagcctccgg
gagctgaagcagctcaaggtattgtccctccgaagcaatgccgggaaggtgccggccagt
gtgactgacgttgccggtcacctgcagaggctcagcctgcacaatgatggggcccgcctg
gtggccctgaacagcctcaagaagctggtggcattgcgggagctggagctggtggcttgc
gggctggagcgcattccccacgctgtgttcagcctgggctcgctgcaggaactcgacctc
aaggacaaccacctgcgctccatcgaggaaatcctcagcttccagcactgccggaagctg
gtcacgcttaggctgtggcacaaccagatcgcctacgtccccgagcatgtgcgcaagctc
aaaagcctggagcagctctacctgagctacaacaagttggagaccctgccctcccagctt
ggcctgtgctcgggcctccgtctgctggatgtgtcccacaacgggcttcactccctgccg
cctgaggtgggcctcctgcagaacctacagcacctggccctctcctacaatgccctggat
gccctgcctgacgagctcttcttctgccgaaagctgcgaacgttgcttctgggagataac
cagctgacccagctctcctcccaagtgggtgccctcagggccctcagccgcctggagctc
aaaggcaaccgtttagagatgctgccggaagaacttggcaactgcggggggctcaagaaa
gcaggactgctggtggaagacaccctttaccagggtctgccggcagaggtgcgggacaag
atggaggaggaatga
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