Callithrix jacchus (white-tufted-ear marmoset): 100410526
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Entry
100410526 CDS
T03264
Name
(RefSeq) protocadherin beta-17
KO
K16494
protocadherin beta
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100410526
Cell adhesion molecules [BR:
cjc04515
]
Cadherins
Protocadherins
100410526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
100410526
NCBI-ProteinID:
XP_035142573
UniProt:
A0A8I4A462
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Position
2:37589138..37592045
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AA seq
797 aa
AA seq
DB search
MMETRLPKAPEKRQVTAIFFLLLLWEAGSATINYSVLEERDSGSFVANLAKDLGLGVGEL
AERGARILSKGNKQYLQLERKSGNLLLKEKLDREELCGDTDPCILHFQVLLKNPVQFIQG
ELQLQDVNDHAPEFLENEILLKISEGSHPGTSFPLKIAQDLDVGSNTVQNYTISTNSYFH
LFTRNHSDGKKYPELVLDQALDREEQPQLRLTLTALDGGSPPRTGTSQVLIVIVDINDNA
PEFAQRLYEVQVPENTPIGSLVVTVSATDLDAGTHGELSYSFFQYSNQIIQAFEINSITG
EIRLKKVLDFEEIQSYHVEVEASDGGGLSEKCTVVIEVMDINDNAPELTMSLLISDIPEN
SPETVVAVFGISDPDSGNNGKIMCSIQDHHPFLLKPTVENFYTLLTEGALDRERRAEYNI
TITVTDLGTPRLKTEHSITVRVSDVNDNAPAFTQTSYTLFVRENNSPALHIGTVSATDRD
SGTNAQVTYSLLPPQDPHLALAYLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSP
ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRVAEPGYLVTKVVAVDGDSGQN
AWLSFQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLLVLVKDNGEPSRSATATLH
VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA
ASVGGCSVTEGPFPGHLVDVSGTGTLSQNYQYEVYVAESSESQFKFLKPILPNFLGEGTG
GRDSETNSNSRNRFGFN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacgcggctccccaaagcgccagagaaaaggcaagtgactgccatttttttc
ttattactactgtgggaggcgggcagcgctaccattaactattcagtcctagaagagagg
gacagcggctcttttgtggccaacctagcaaaagatctggggctgggtgtaggggagctg
gccgagaggggcgcccggattctttccaaaggaaacaaacagtatttgcagctcgaacgg
aagagtgggaatttgctcctgaaagaaaaattggacagggaggagttgtgcggtgacaca
gatccatgtatactgcatttccaggtgttactgaaaaatccggtacagtttattcaaggt
gaactacagctccaagatgtaaatgaccatgccccagaattcttggaaaatgaaatactc
ctgaaaatctctgaaggcagccatccagggacttcatttcctttgaaaatagctcaagat
ttggacgtaggtagcaacacagttcagaactacacaattagcaccaactcctatttccac
cttttcactcgcaatcacagcgacggcaagaaatacccagagctagtgctggaccaagcg
ctggaccgcgaggagcagccccagctcaggttaaccctcacagcgctggatggtgggtca
ccgcccagaactgggacttcccaggttctcatagtgattgtagatatcaatgacaacgcc
cctgaatttgctcagcggctctatgaggtgcaggtcccagagaacacccctataggttcc
cttgtcgttactgtctctgctacagatttagatgctgggacccacggggagctctcctac
tcatttttccaatactcaaatcaaatcattcaggcttttgaaataaactcaatcacagga
gaaattagattaaaaaaggtgttggattttgaggaaattcaatcgtaccatgtggaagtt
gaggcctcagacggcgggggtctttcagaaaaatgcaccgtagtcatagaagtgatggat
ataaacgacaacgccccggaactgaccatgtccttactcatcagtgatattccagaaaac
tccccagaaactgtggtcgctgttttcggaatttcggatccggactccgggaacaacgga
aaaataatgtgttccatccaagaccatcatcctttccttctaaaacctaccgtagaaaat
ttctacaccttgttaacagaaggagcactagacagagagcgcagggccgagtacaacatc
accatcactgtcacagacttggggacacccaggctgaaaaccgagcacagcataaccgtg
cgggtctccgacgtcaatgacaacgcccccgccttcactcaaacctcctacaccctcttc
gtccgcgagaacaacagccccgccctgcacatcggcaccgtcagcgccacagacagagac
tcaggcaccaacgcccaggtcacctactcgctgctgccgccccaggacccgcacctggcc
ctcgcctacctggtctccatcaacgcggacaacggacacctgttcgccctccggtcgctg
gactacgaggccctgcaggcgttcgagttccgcgtgggcgccacagaccgcggctccccg
gcgctgagcagcgaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgccc
ttcgtgctgtacccgctgcagaacggctccgcgccctgcaccgagctggtgccccgggtg
gccgagccgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaac
gcctggctgtcgttccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcg
cacaatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgcggccaagcacagg
ctgctggtgctggtcaaggacaatggcgagccttcgcgctcggccaccgccacgctgcac
gtgctcctggtggacggcttctcccagccctacctgccgctcccggaggcggccccggcc
caggcccaggccgactcgctcaccgtctacctggtggtggcgttggcctcggtgtcgtcg
ctcttcctgttctcggtgctcctgttcgtggcggtgcggctgtgcaggaggagcagggcg
gcctctgtgggtggctgctcggtgaccgagggtccctttccagggcatctggtggacgtg
agcggcaccgggaccctgtcccagaattatcagtatgaagtttacgtggcagaaagctct
gagagccagttcaagtttcttaagccgatacttcccaacttcctgggtgaagggactggt
ggtagggacagcgagacaaattccaactccaggaatcgttttgggttcaattag
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