Callithrix jacchus (white-tufted-ear marmoset): 100410533
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Entry
100410533 CDS
T03264
Symbol
RUBCN
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X4
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100410533 (RUBCN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100410533 (RUBCN)
Membrane trafficking [BR:
cjc04131
]
Autophagy
Other autophagy associated proteins
Others
100410533 (RUBCN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUBC_PIKBD
RH_dom
RUN
Motif
Other DBs
NCBI-GeneID:
100410533
NCBI-ProteinID:
XP_008982372
Ensembl:
ENSCJAG00000016456
LinkDB
All DBs
Position
17:complement(74298321..74370592)
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AA seq
987 aa
AA seq
DB search
MRPESAGMELGGGEESLPEESRREHWQLLGNLKTTVEGLVSANSPNVWSKCGGLERLCRD
MQSILYHGLIHDQHVCCRQTDYWQFVKDIRWLSPHSALHVEKFISLHENGQSSADGVSEH
AVAELWLQHSLQFHCLSAQLRPLLGDRQYIRKFYTDTAFLLSDAHVTAMLQCLEAVEQNN
PRLLAQIDVSMFARKHESPLLVTKSQSLTALPSSTYTPPTSYAQHSYLGSFSSLHQSVPN
NGSERRSTSFSLSGPPRKPQESRGHISPAEDQTIQAPLVSVSAVARDSLLTPNDMSSSTL
PSPIEASWVSSQNDSPSDASEGPEYLAIGNLDPRGRTASCQSHSSNAESSSSNLFSSSSS
QKPDSAASSLGDQEGGGESQLSSVLRRSSFSEGQTLTVTSGAKKSHIRSHSDTNIASRGA
PGGPRNITIIVEDPIAESCNDKSKLRGSLPYSGQSSEVSSPSSLYMDYEGSRYLGSEGMF
RRPSEGQSLISYLSEQDFGSCADLEKENAHFSISESLIAAIELMKCNMMSQCLEEEEVEE
EDSDREIQELKQKIRLRRQQIRTQNLLPVYQETEHGSFRVTSSSSQFSSRDSAQLSDSGS
ADEVDEFEIQDADIRRNAASSSKSFISSQSFSHCFLHSTSAEAVAMGLLKQFEGMQLPAA
SELEWLVPEHDAPQKLLPIPDSLPISPDDGQHADIYKLRIRVRGNLEWAPPRPQIIFNVH
PAPTRKIAVAKQNYRCAGCGIRTDPDYIKRLRYCEYLGKYFCQCCHENAQMAIPSRILRK
WDFSKYYVSNFSKDLLIKIWSDPLFNVQDINSALYRKVKLLNQVRLLRVQLYHMKNMFKT
CRLAKELLDSFDTVPGHLTEDLHLYSLNDLTATRKGELGPRLAELTRAGVAHVERCMLCQ
GKGFICEFCQNEDDIIFPFELHKCRTCEECKACYHKACFRSGRCPRCERLQARRELLAKQ
SLESYVSDYEEEPAEALAVEATVLETT
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgcggccggagagcgcgggcatggagctcggcggcggcgaggagagcctgcccgaggag
agcaggagggagcactggcagttgcttggtaatttgaagactacggtggaaggcttggta
tcagccaacagccccaatgtctggtccaagtgtggtggcttggagcggctttgcagggac
atgcagagtatcctctatcatgggcttatccatgaccagcacgtgtgctgccgccagact
gattactggcagtttgtgaaagatatccggtggctcagtccccactcagcccttcatgtg
gagaagttcatcagcttgcatgagaacggccagagcagtgctgatggtgtgagtgaacac
gctgttgcagagctgtggctgcagcacagcctgcagttccactgcctctcagcccagctc
cggcccctgctcggggacagacagtacatcagaaagttctacacagatactgctttcctg
ctaagtgatgctcatgtcacagccatgctccagtgcctggaagcagtggaacagaacaac
cctcgcctcctggctcagatcgatgtgtccatgtttgccagaaagcatgagagcccactc
ctggtgacaaaaagccagagcctgacagccctgcccagttccacgtacacccctccaacc
agctatgctcagcattcctacttggggtccttctccagccttcaccagtctgtgcccaac
aatggctcagagagaagatctacttccttttcactctctggccctccgcggaaacctcaa
gaaagcagagggcacatctcaccagcagaggatcaaaccatccaagcccccctggtttca
gtctctgcagtagccagggattccctcttgaccccgaatgacatgagctccagtactctg
cccagccccatagaggcatcctgggtcagcagccagaatgattcccccagtgatgccagt
gaggggcctgagtacctggccatcggcaacttggacccccgaggccggactgccagctgt
cagagtcacagcagcaatgctgagagcagcagctccaatttgttctcctccagcagctcc
cagaagccagattctgctgcatcttccttaggggaccaggaaggaggtggggagagccag
ctgtccagtgtcctccgcaggtccagcttctccgaggggcagacactcaccgtcaccagt
ggggcaaagaagagccacattcgctcgcattcagataccaacatcgcctccagaggagct
ccaggaggccccaggaatatcaccattatagttgaagatcccattgcagaatcctgcaat
gataagtcgaagctgagaggctccttgccctactctggtcaaagcagtgaagtcagctca
cccagctctctgtacatggactatgaaggcagtcggtacctgggctctgaaggcatgttc
cgaagaccgtcagaaggacagtccctcatcagctacctctctgaacaagactttggcagc
tgtgcagacctggagaaggagaatgcccactttagcatctcagagtccttaattgctgcc
atcgagctaatgaagtgcaacatgatgagccagtgcctagaagaggaggaagtggaagag
gaagacagtgacagagagatccaggaactgaagcagaagatccgccttcggcgccagcaa
atccgcacccagaatctgctcccggtgtaccaggagactgagcacggaagctttcgggtc
acctctagcagctcccagttcagttcacgtgattcggcacagctctctgactctggctct
gctgatgaggttgatgaatttgaaatccaagatgccgacatcagaaggaacgcagcctca
agcagcaaatccttcatttcctcccagtccttctcccactgcttcctgcactccacctct
gctgaggcggtggccatggggcttctgaagcagttcgaggggatgcagcttccagctgcc
tcagagctggagtggcttgtcccggagcatgatgcccctcagaagctcctgcccatcccg
gactcactgcccatctcaccagatgacgggcagcatgctgacatctacaagctgcgtatt
cgtgttcgtggcaacttggaatgggccccaccccggcctcagataatttttaatgttcat
ccagccccaacgaggaagattgctgtggccaagcagaattaccgctgtgcaggctgtggc
atccggactgaccctgattatatcaagcgactgcggtactgtgagtacttgggcaagtac
ttctgccagtgctgccatgagaacgcccagatggccatccccagccggatcctgcgcaag
tgggacttcagcaaatattatgtcagcaatttctccaaggacctgctcatcaagatctgg
agtgatcctctcttcaatgttcaggacataaacagcgccctctacaggaaggtcaagctg
ctcaaccaagtgcgactgctgcgggtccagctgtatcacatgaagaacatgttcaagaca
tgccgactggctaaagagcttctggattcctttgacacagtcccaggccacctgacggag
gatctccacctgtactcactgaacgacctgactgcaaccaggaagggggagttggggccc
cggcttgctgagctcaccagggcgggggttgcccacgtggagagatgcatgctctgccaa
ggcaagggcttcatctgtgagttctgtcagaatgaggatgacatcatctttccctttgag
ctgcataagtgccggacatgtgaagagtgtaaagcgtgttaccataaagcctgcttcagg
tctggacgctgtccgcggtgtgagcggctgcaggcccggcgggagttgctggccaagcag
agcctggagtcctacgtgtcggactatgaggaggagcctgcagaagcactggccgtggaa
gccaccgtcctggagaccacctga
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