Callithrix jacchus (white-tufted-ear marmoset): 100410689
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Entry
100410689 CDS
T03264
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03082
ATP-dependent chromatin remodeling
cjc04714
Thermogenesis
cjc05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100410689 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100410689 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100410689 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjc03021
]
100410689 (SMARCD2)
03036 Chromosome and associated proteins [BR:
cjc03036
]
100410689 (SMARCD2)
Transcription machinery [BR:
cjc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100410689 (SMARCD2)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100410689 (SMARCD2)
PBAF complex
100410689 (SMARCD2)
GBAF(ncBAF) complex
100410689 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
100410689
NCBI-ProteinID:
XP_035156312
Ensembl:
ENSCJAG00000019528
UniProt:
U3EEK9
LinkDB
All DBs
Position
5:complement(85118159..85130859)
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AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPSAGPGMLPGPVLRGPGPAGGVGGPGAAAFR
PMGPAGPAAQYQRPGMSPGNRMPMAGLQVGPPAGSPFGAAAPLRPGMPPTMMDPFRKRLL
VPQVQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSVGTAGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgaggcgcgggcgggttcccgctgcccccgctgagccctggcggcggcgcg
gtggccgcggccctgggagcgccgccgccttctgcgggacccggcatgctgcccggaccg
gtgcttcggggaccagggccagctggaggcgtggggggccccggggccgccgccttccgc
cccatgggccccgcgggccccgcggcgcagtaccagcgacctggcatgtcaccagggaac
cggatgcccatggctgggttgcaggtgggaccccctgctggctccccatttggtgctgca
gctccacttcgacctggcatgccacctaccatgatggatccattccgaaaacgcctgctt
gtgccccaggtgcagccccccatgcctgcccagcgccgggggttaaagaggaggaagatg
gcagataaggttctacctcaacgaatccgggagcttgtcccagagtctcaggcctacatg
gatctcttggcttttgagcggaagctggaccagaccattgctcgcaaacgaatggagatc
caggaggccatcaaaaagcctctgacgcaaaagcgaaagcttcggatctacatttccaac
acattcagtcccagcaaggcagaaggcgacagtgtaggaactgcagggacccctggggga
accccagcaggggacaaggtggcttcctgggaactccgagtggaaggaaaactgctggat
gatcctagcaaacagaagaggaagttttcttcattctttaagagcctggtcattgagctg
gacaaggagctgtatgggcctgacaatcacctggtggagtggcaccggatgcccaccacc
caggagacagatggcttccaggtaaaacggcctggagacctcaatgtcaagtgcaccctc
ctgctcatgctggatcatcagcctccccaatacaaattggacccccgattggcgagactg
ctgggagtgcacacacagacgagggctgccatcatgcaggccctgtggctttacatcaag
cataaccagctgcaggacgggcatgagcgggagtacatcaactgcaaccgctatttccgc
cagatcttcagttgtggccgactccgtttctctgagattcccatgaagctggcggggttg
ctgcagcacccggaccccattgtcatcaatcatgtcattagtgtggacccaaacgaccag
aagaagacagcctgttacgacattgatgtggaggtggatgacccgctgaaggcccagatg
agcaattttctggcctctaccaccaatcagcaggagattgcctcccttgatgtcaagatc
catgagaccattgagtccatcaaccagctaaagacccagagggatttcatgctcagcttt
agcaccgacccccaggacttcattcaggaatggctccgttcccagcgccgagacctcaag
atcatcactgatgtgattggaaatcctgaggaggagagacgagctgctttctaccaccag
ccctgggcccaggaagcagtaggcaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctaggaattcgcctgacctaa
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integrated database retrieval system
