Callithrix jacchus (white-tufted-ear marmoset): 100410876
Help
Entry
100410876 CDS
T03264
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1
KO
K15225
transcription termination factor 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
100410876 (TTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjc03021
]
100410876 (TTF1)
Transcription machinery [BR:
cjc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
100410876 (TTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
100410876
NCBI-ProteinID:
XP_009002773
Ensembl:
ENSCJAG00000018230
LinkDB
All DBs
Position
1:complement(178006615..178038332)
Genome browser
AA seq
1057 aa
AA seq
DB search
MEGESSRFEVHTPVFDKKKKKYSVHKERPQKHSHEIFRDSSLVNEQSQITRRKKREKDCQ
HLIYSPLKKSRICDETENATSTLKKRKKRRCSALEVDEEVGVTVVLMGKENIDNTPECFR
EDADVVCVDTSMEQKSARELKTDKLRGLAKSHTCKSEALHDKAREKKNTKHRRKATSCDA
LKESQQARDTLPQSESPREDSWPSRGPGDNITELPASAHKNKSKRKKKKKSDNQEYETWA
IPEGSQAGSKAGSDVWESRPTVCLGGEPAELLAPAYQKKSKEKKKKKSTHQELEALAVPE
ELQAGSKAGSDVWESWPTVGLGGEPAELLAPAYQKKSKEKKKKKSTHQELEALAVPEELQ
AGSKAGSDVWESRPTMGLGGEPAELLAPAYQKKSKEKKKKKSTHQELEALAVPEELQAGS
EAGSDVWESRPTVGLGGEPAELLARAHKKKSKKKKKKKSTHQELEALAMPEKLQAGSEAG
TDPQEYQPAADLQGETAEVPAPAYKNKSKKKKKKSSNWELEALAMPESLESAYPEGSQVG
IEVEAVEGRSALKGVKESSSTKKKSKKRKLMPVKGAVASADDLPVSSKKSASTLFDSVEG
SGTMIKASVKPRPQPKKTQAYSENRRVQEVPRLEPANEERNVESAEDSKTRYLSENLGDA
DDSDADLGSAVRQLQEFIPNIKDRATSTIRRMYRDDLDRFKEFKAQGVAIKFGKFSVKEN
KQLEKNVQDFLALTGIESADKLLYTDRYPEEKSVITNLKRRHSFRLHIGRNIARPWKLIY
YRAKKMFDVNNYKGRYTEGDTEKLKMYQSLFGNDWKTIGEMVARSSLSVALKFSQISSQR
NRGAWSKSETQKLIKAVEEVVLKKMSPQELEDVDSKLQGDPESCLSIVREKLYKGISWVE
VEAKVKSRNWMQCKSKWTEILTKRMTNGQRLYYGVNGLQAKVNLIERLYEINVEDTNEID
WEDLASAIGDVPPSYVQTKFSRLKAIYVPFWQKKTFPEIIDYLYETTLPLLKEKLEKMME
KKGTEIQSPAAPKQVFLFRDIFYYEDNSEGEDVEKES
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagaatcaagcagatttgaagtccacactccagttttcgacaagaaaaagaaa
aaatattctgtacataaggaaagacctcagaaacattcccacgaaattttcagagactcc
tctctggtgaatgaacagtctcaaataactaggaggaaaaagagggaaaaagattgccag
catctcatttattctcctttgaaaaaatccagaatctgtgacgagactgaaaatgccact
tctacactcaaaaagagaaaaaagagaagatgcagtgctttggaggtagacgaggaagta
ggtgttacagtagtccttatgggtaaagaaaatatagacaacacaccagagtgttttaga
gaggatgctgatgttgtttgtgttgacacgagcatggaacagaagtcagcaagagagctg
aaaacagacaaacttcgtggacttgctaagtcacatacatgtaagtcagaagcactgcat
gataaagctagagagaaaaagaatacaaagcatcggaggaaagctacatcctgtgatgct
ctaaaggagagccagcaggcaagggacaccctgcctcagtcagaatccccccgggaggat
tcctggccttccaggggtccaggggataacattacagaactaccagcatctgctcataaa
aataagtctaagagaaagaagaagaaaaagtccgataaccaagaatacgagacatgggcc
atccccgaaggatcgcaagcaggcagcaaggctgggagtgatgtgtgggaatcccggcct
actgtgtgcctgggtggtgaacctgcagaactgctagcacctgcttaccaaaaaaagtct
aaggaaaaaaagaagaaaaagtccactcaccaggaattggaggcattggccgtgcctgaa
gaattgcaagcgggcagcaaggctgggagtgatgtgtgggaatcctggcctaccgtgggc
ctgggtggtgaacctgcagaactgctagcacctgcttaccaaaaaaagtctaaggaaaaa
aagaagaaaaagtccactcaccaggaattggaggcattggccgtgcctgaagaattgcaa
gcgggcagcaaggctgggagtgatgtgtgggaatcccggcctaccatgggcctgggtggt
gaacctgcagaactgctagcacctgcttaccaaaaaaagtctaaggaaaaaaagaagaaa
aagtccactcaccaggaattggaggcattggccgtgcctgaagaattgcaagcgggcagt
gaggctgggagtgatgtgtgggaatcccggcctactgtgggcctgggtggtgaacctgca
gaactgctagcacgtgctcacaaaaagaagtctaagaaaaaaaagaagaaaaagtccact
caccaggaattggaggcattggccatgcctgaaaaattgcaagcgggcagtgaggctggg
actgatccgcaggagtaccagcctgctgcagacctacagggtgaaactgcagaagtgcca
gcacctgcttataaaaacaagtctaagaagaaaaagaaaaaatccagtaactgggaattg
gaggcattggccatgcctgagagccttgagagtgcataccctgaaggatcacaagtgggc
attgaggttgaggctgtggagggcaggagtgcactgaaaggggtcaaggaatccagcagt
acaaagaagaagtctaagaaaaggaagctgatgcctgtcaaaggggccgtagcatctgcc
gatgatcttccagtgtctagtaagaaatctgcgagcacgctctttgattcagtagaaggc
agtggcactatgattaaagcaagtgtgaaacccaggccccagccaaagaaaacccaggcc
tattcagaaaacaggcgtgtgcaagaggtaccaaggttagaacctgcaaatgaagaacgc
aatgtggaatcagctgaagattccaaaacaagatatttatctgaaaatttaggagatgct
gatgattcagatgcagatttgggttctgccgtgagacagcttcaggagttcatccctaac
atcaaggacagggccaccagcacgatcaggcggatgtaccgggatgacctggaccggttt
aaggaatttaaagcacaaggtgttgctattaaatttggaaagttttctgtcaaggaaaat
aagcagttagagaaaaatgtgcaagactttctagccctgacaggaattgagagtgctgac
aagctgctgtatacagacagatacccagaggaaaaatctgtgatcaccaacttaaaaagg
agacactcgtttagattgcacattggtaggaacattgcccggccctggaaacttatatac
tatagagcaaagaagatgttcgatgtcaacaattacaaaggcaggtatactgaaggagat
accgagaagttaaagatgtaccagtctctctttgggaatgactggaaaacgattggcgag
atggtggcccgcagtagcctgtccgtggccctgaagttctcccagatcagcagtcaaaga
aatcgtggtgcttggagtaagtcagaaacccagaaactaatcaaggctgttgaagaagtg
gttctaaagaaaatgtctccccaggagttagaagacgtggattccaaactccaaggagat
cctgagagttgcctatcaattgttcgggaaaaactctacaaaggcatatcttgggtagaa
gtagaagccaaagtgaagagcagaaattggatgcagtgtaaaagtaagtggacagaaatt
ctaaccaagaggatgaccaatggtcagcgcctatactatggagttaatggcctgcaggcc
aaagtcaacctaattgaaaggttgtatgaaataaacgtggaagatactaatgaaatagac
tgggaagatcttgctagtgccataggtgatgttcctccatcttacgttcaaactaaattt
tctaggctgaaagctatctatgtcccattttggcagaaaaagacttttccagagatcatc
gactacctttatgagactactctacctttgcttaaagaaaagttagaaaagatgatggag
aaaaaaggcactgaaatccagagtcctgcagcacccaagcaagtgttcctgttccgagac
atcttttattatgaagacaatagtgaaggagaggacgtagaaaaagaaagttga
DBGET
integrated database retrieval system
