| Entry |
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| Symbol |
FDFT1
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| Name |
(RefSeq) squalene synthase isoform X1
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| KO |
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| Organism |
cjc Callithrix jacchus (white-tufted-ear marmoset)
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| Pathway |
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| Module |
| cjc_M00101 | Cholesterol biosynthesis, FPP => cholesterol |
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| Brite |
KEGG Orthology (KO) [BR:cjc00001]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
100410988 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:cjc01006]
100410988 (FDFT1)
Enzymes [BR:cjc01000]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
100410988 (FDFT1)
Prenyltransferases [BR:cjc01006]
Terpene biosynthesis
Squalene/phytoene synthase
100410988 (FDFT1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
13:complement(7117964..7160056)
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| AA seq |
417 aa
MEFVKCLGHPEEFYNLVRFRIGGKRKVMPKMDQDSLSSSLKTCYTYLNQTSRSFAAVIQA
LDGEMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFTESKEKDRQ
VLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLNKHVTSEQEWDKYCHYVAGLVG
IGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQEGREFWPQEVWSRYV
KKLGDFAKPENIELAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATL
AACYNNQQVFRGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTR
QIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSLQYLTTLSQVTEDYVQTGEH |
|---|
| NT seq |
1254 nt +upstreamnt +downstreamnt
atggagttcgtaaagtgcctaggccaccccgaggagttctacaacctggtgcgcttccgc
atcgggggcaagcggaaggtgatgcccaagatggaccaggactcgctcagcagcagcctg
aaaacttgctacacgtatctgaatcagacgagtcgcagtttcgcagctgttatccaggcg
ctggatggggaaatgcgcaatgcagtgtgcatattttatctggtcctccgagctctggac
acgctggaagatgacatgaccatcagtgtggagaagaaggtcccgctgttacacaacttc
cactctttcctttaccagccagactggcggttcacggagagcaaggagaaggaccgccag
gtgctggaggacttcccaacgatctccctcgagtttagaaatctggctgagaaataccaa
acggtgatcgctgacatttgccggagaatgggaattgggatggcagagtttttgaataag
catgtgacctctgaacaggagtgggacaagtactgccactatgttgctgggctggtagga
attggcctttcccgtctcttctcggcctcagagttcgaagaccccttagttggtgaagat
acagaacgtgccaactccatgggcctgtttctgcagaaaacaaacatcattcgtgactat
ctggaagaccagcaagaaggaagagagttttggcctcaagaggtttggagcaggtatgtt
aagaagctgggggattttgccaagccggagaatattgagttggccgtgcagtgcctgaat
gaacttataaccaacgcgctgcaccacatcccagacgtcatcacctacctttcgagactc
agaaaccagagcgtgtttaacttctgtgctatcccacaggtgatggccattgccactttg
gctgcctgttacaataaccagcaggtgttcagaggggtagtgaagattcggaaagggcaa
gccgtgaccctgatgatggatgccaccaacatgccagctgtcaaagccatcatatatcag
tatatggaagagatttaccatagaatccccgactcagacccatcttccagtaaaacgagg
cagatcatctccaccatccggacgcagaatcttcccaactgtcagctgatctcccgaagc
cactactcccccatctacctgtcctttgtcatgctcttggctgccctgagcttgcagtac
ctgaccacactctcccaggtcacggaagactatgttcagactggagaacactga |
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