Callithrix jacchus (white-tufted-ear marmoset): 100411046
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Entry
100411046 CDS
T03264
Symbol
SOGA1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100411046 (SOGA1)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100411046 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Motif
Other DBs
NCBI-GeneID:
100411046
NCBI-ProteinID:
XP_035153877
Ensembl:
ENSCJAG00000001273
LinkDB
All DBs
Position
5:309420..404774
Genome browser
AA seq
1903 aa
AA seq
DB search
MDAGSCELRSARPRPGSARSRRSRGPCQDAGRRGASAGCVPGAGRGGGGGAEEEGGRAAA
ARARLTLEGVAVASQIPPSLPACLPPRRSRRVRLLFAEPRAPEPRRRGGELAGLRGGRAA
PGGAGARAAAGLAARGSDRRAGGGVPGALRGRGEAEGAGAGRSRSRSRGAWRRSGRTVRA
QSCGETARRAVGRGRSVEAEVGRGQPLPERREPQPRRLPPQGRRGRAGLGHAHGSLRPTE
AAMEAPAAEPQLRGSGPQPASAPAPERRKSHRAPSPARPKDVAGWSLAKGRRGPGPGAAA
ACSAASSARPDKKGRAVAPGARGAGVRVAGVRTGVRAKGRPRPGAGPRPPPPPPSLTDSS
SEVSDCASEEARLLGLELALSSDAESVAGGPAGVRTGQSGQPAQSAQQPPRPPASPDEPS
VAASSVGSSRLPLSASLAFSDLTEEMLDCGPGGFVRELEELRSENDYLKDEIEELRAEML
EMRDVYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRAAQTGQVDGELIRGLE
QDVKVSKDISMRLHKELEVVEKKRARLEEENEELRQRLIETELAKQVLQTELERPREHSL
KKRGTRSLGKADKKPLVQEDSADLKCQLHFAKEESALMCKKLTKLAKENDSMKEELLKYR
SLYGDLDSALSAEELADAPHSRETELKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDD
MKDHGGGCGGPEARLAFSALGSGECGESLAELRRHLQFVEEEAELLRRSSAELEDQNKLL
LNELAKFRSEHELDVALSEDSCSVLSEPSQEELAAAKLQIGELSGKVKKLQYENRVLLSN
LQRCDLASCQSTRPMLETDAEAGDSAQCVPAPLGETHESHVARLCRAREAEALPGLREQA
ALVSKAIDVLVADANGFSAGLRLCLDNECADLRLHEAPDNSEGPRDTKLIHVILVRLSVL
QQELNAFTRKADLVLGGSVKEQQESFSSLPSLGSQGLSKEILLAKDLGPDFQMQPPDFRD
LPEWEPRIREAFRTGDLDSKPDPSRSFRPFRAEDNDSYASEIKELQLVLAEAHDSLRGLQ
EQLSQERQLRKEEADNFNQKMVQLKEDQQRALLRREFELQSLSLQRRLEQKFWSQEKNML
VQESQQFKHNFLLLFMKLRWFLKRWRQGKVLPSEGDDFLEVNSMKELYLLMEEEEINAQH
SDNKACTGDSWTQNTPNEYVKTLADMKVTLKELCWLLRDERRGLTELQQQFAKAKATWET
ERAELKGHTTQMELKAGKGAGERAGPDWKAALQREREEQQHLLAESYSAVMELTRQLQIS
ERNWSQEKLQLVERLQGEKQQVEQQLKDLQNRLSQLQKAADPWVLKHSELEKQDNSWKET
RSEKIHDKEAVSEVELGGNSLKRTKSVSSMSEFESLLDCSPYLAGGDARGKKLPNNTAFG
FVSSEPGDPEKDTKEKPGLSSRDCNHLGALACQDPPGRQMQRSYTAPDKTGIRVYYSPPV
ARRLGVPVVHDKGGKIIIEPGFLFTTAKPKESAEADGLAESSYGRWLCNFSRQRLDGGSG
GSPSAAGPGFPAALHDFEMSGNMSDDMKEITNCVRQAMRSGSLERKVKSTSSQTVGLASV
GTQTIRTVSVGLQTDPPRSSLHGKAWSPRSSSLVSVRSKQISSSLDKVHSRIERPCCSPK
YGSPKLQRRSVSKLDSSKDRSLWNLHQGKQNGSAWARSTTTRDSPVLRNINDGLSSLFSV
VEHSGSTESVWKLGMCETRAKPEPPKYGIVQEFFRNVCGRAPSPTSAAGEEGTKKPEPLS
PASYHQPEGVARILNKKAAKSGSSEEARTTMLSQVGKDGVLRDGDGAMVLPNEDAVCDCS
TQSLTSCFARSSRSAIRHSPSKCKLHPSESSWGGEERAAAPSE
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggctcctgcgaactgaggtccgccaggcctcggcccgggagtgcccgctcc
cgccgctctcgcgggccctgccaggacgccgggcgcaggggggcctccgccgggtgcgtt
cctggggcgggcaggggaggaggcggcggagcggaggaggagggaggccgggccgcggct
gcccgcgcccgcctgaccctcgagggggtcgctgttgcctcgcagatccctccctcgctc
cctgcctgcctccctccccgccgctcccgccgcgtccgccttttgttcgcggaaccgcgc
gcccccgagccgaggcggcggggcggggagctggcggggctgcgcggggggcgggccgcg
ccgggcggagccggggcccgggccgcagccggactcgcagcccgagggagcgatcggcgt
gcgggcggcggggtcccgggcgcgctccggggacgcggcgaggccgagggggcgggcgcc
gggcggagccgtagtcggagccggggcgcctggaggcggtcggggcgcactgttcgagcc
cagagctgtggagagaccgcgcggcgggccgtggggcggggacgcagtgtcgaggctgag
gtgggccgagggcagccgctgcccgagcggcgggagccgcagccgcgccggctccctccc
cagggacgtcgaggccgggcgggcctgggccatgcgcacggctcgctgaggccgacggag
gccgcgatggaggcgccggcggccgagccccagctccggggctctggcccccagcccgcg
tccgcgcctgccccggagaggagaaagagccaccgcgcgccgtcgccggcccggcccaaa
gacgtggccggctggtcgctggctaagggccgccgcggcccaggccccggcgcagccgcc
gcctgcagtgccgcgtcctccgcacggcccgacaagaaggggcgcgcggtggcgcccggg
gctcggggcgcgggggtgcgggtggccggggttcgcacgggggtccgtgccaagggtcgc
ccgcgcccgggtgcggggccgcgcccgccgccgccgccccccagcctcacggacagcagc
tcggaggtgtcggactgcgcgtcggaagaggcgcgcttgctgggcctggagctggcgctg
agcagcgacgcggagtcggtggccgggggcccggcaggggtccgcacggggcagtcgggc
cagcccgcacagtccgcgcagcagcccccgcgcccgcccgcctccccggacgagccgtcg
gtggccgcgtcgtcagtgggcagcagccgcctgccgctcagcgcctcgctcgccttctcc
gacctcaccgaggagatgctggactgcgggcccggcggcttcgtgcgggagctggaggaa
ctgcgctcggagaacgactatctgaaggacgagattgaggagctgcgggccgagatgctg
gagatgcgggatgtctatatggaggaggacgtgtatcagctgcaggagctgcggcagcag
ctggaccaggccagcaagacctgccgcatcctgcagtaccggctgcgcaaagctgagcgc
cgcagtctgcgtgctgcccagactggccaggtggacggcgagcttatccgtggtctggag
caggatgtcaaggtctctaaggacatctccatgaggctgcataaggagcttgaggtggtg
gagaagaaacgggcacggctagaggaggagaatgaggagcttcggcagcggctcatcgag
actgagctggcgaagcaggtgctgcagacagagctggagcggccaagagagcattctttg
aagaaaagaggaacccgctccctggggaaagcagataagaagcctttggttcaggaggac
agcgcggacctgaagtgccagctgcactttgcaaaggaggagtcggccctcatgtgcaag
aagctcactaagctggccaaggagaatgacagcatgaaggaggagctgctgaagtaccgc
tcgctctacggggatctggacagtgcgctgtcagctgaggagctggccgatgccccccac
tcgcgggagaccgagctgaaggtgcacctgaagctggtggaggaggaggccaacctgctg
agccgccgcatcgtggagctggaggtggagaaccgaggcctgcgggctgagatggacgac
atgaaggatcacggaggtggctgtggggggcccgaggcacgcctggccttctctgcactg
ggtagtggcgagtgtggggagagcttggcggagctgcggcgacacctgcagttcgtggaa
gaggaggctgagctgctgcggcgctcctccgccgagctcgaggaccagaacaagctgctg
ctgaatgagctggccaagttccgctcggagcacgagctggacgtggcactctcggaggac
agctgctccgtgctcagcgaaccctcgcaggaggagctggcggccgccaagttgcagatc
ggtgagctcagtggcaaggtcaagaagctgcagtacgagaaccgtgtgctcctgtccaac
ctccagcgctgcgacctcgcctcctgccagagtacacggcccatgctggagacagacgcc
gaggccggagactctgcccagtgtgtgcctgctcccctgggtgagacacacgagtcccat
gtggcccgactctgcagagccagggaggctgaagcgctgcctgggctgagggagcaggcc
gccctggtcagtaaggccatcgatgtcctggtggctgatgccaacggcttctcagctggc
ctccggctgtgtctggacaatgaatgtgctgacttgcggctgcacgaagcccccgacaac
agcgagggccccagggacaccaagctcatccatgtcatcctggtgcgcctgagtgtgctg
cagcaagagctgaacgccttcacgcggaaggcggatctagtcctcgggggctctgtcaag
gagcagcaggagtccttctcatcactgccctccttgggctcccaggggctctccaaggag
attcttctggcaaaagaccttggcccagactttcagatgcagccgcctgacttcagggac
ctgccggaatgggagcccaggatccgagaggccttccgcactggtgacttggactctaag
cctgaccccagccggagcttcaggcctttccgagctgaagacaatgattcctatgcctct
gagatcaaggagctgcagctggtgctggctgaggcccatgacagcctccggggtttgcaa
gagcagctctcccaggagcggcagctacgaaaggaggaggccgacaatttcaaccagaaa
atggtccagctgaaggaggaccagcagagggcgctcctgaggcgggagtttgagctgcag
agtctgagcctccagcggaggctggagcagaaattctggagccaggagaagaacatgttg
gtgcaggagtcccagcagttcaagcacaacttcctgctgctcttcatgaagctcaggtgg
ttcctcaagcgctggcggcagggcaaggttttgcccagtgagggggatgacttcctcgag
gtgaacagcatgaaggagctgtacctgctgatggaggaagaggagataaacgctcagcat
tctgataacaaggcctgcacaggggacagctggacccagaacacgcccaatgagtacgtc
aagacactggccgacatgaaggtgacgctgaaggagctgtgctggctgctccgagatgaa
cgccgtggtctgacggagcttcagcaacagtttgccaaggccaaggctacctgggagaca
gagcgggcagagctcaaaggtcataccacccagatggagctgaaggcagggaagggggcc
ggggagcgggcagggccagactggaaggcagccctacagagggagcgtgaggagcagcag
cacctcctggctgagtcctacagcgctgtcatggagctaacgaggcagctgcagatcagt
gagcggaactggagccaggagaagctgcagctggtggagcggctgcagggtgagaagcag
caggtggagcagcagttgaaggacctacagaaccgcctaagccagctgcagaaggctgct
gacccctgggtcctgaagcactcagagctggagaaacaggacaacagctggaaggagaca
cgcagtgagaagatccacgacaaggaggctgtttccgaagttgaacttggaggaaacagt
ctaaagaggaccaaatctgtttcttccatgtctgagtttgaaagtttgctggactgttcc
ccctaccttgctggtggagacgcccggggcaagaagctgcctaacaacactgcctttggc
tttgtgagttctgaaccaggggatccagagaaagacaccaaggagaagcctgggctctcc
tcgagggactgcaaccacctgggtgccctggcctgtcaggaccccccagggaggcagatg
cagcgtagctatacggctcctgacaagacgggtatccgagtctactatagccccccagtg
gcccggcgcctgggagtccctgtggttcatgacaaagggggcaagatcattattgagccc
ggcttcctcttcaccacagccaagcccaaagagtcggccgaggccgatgggctggctgag
agctcctatggtcggtggctctgcaacttctcacggcagcgcctggacggaggctcaggg
ggcagcccctcggcggccgggcctggcttcccagcggccctgcatgacttcgagatgtcg
ggcaacatgagtgacgacatgaaggagatcaccaactgcgtgcgccaggccatgcgctcg
ggctcactggagaggaaagtgaagagcacgtccagccagacggtgggcctggccagtgtg
ggcacacagaccatccgcacggttagcgtgggcctgcagactgacccaccccgcagcagc
ctccatggcaaggcctggtcaccccgcagctcttcgctcgtgtctgtgcgcagcaagcag
atctcctcctccctggacaaggtccattcgcgcatcgagcggccctgctgctcccccaag
tatggctcaccaaagctccagaggcggtccgtatccaagctggacagcagcaaggaccgc
agcctgtggaacctgcaccagggcaagcagaacggctcagcctgggcccgctccaccacc
acacgggacagccctgtactgagaaacatcaacgatggactctccagcctcttcagtgtg
gtggagcactcagggagcacggagtctgtctggaaactgggcatgtgtgagacgcgggcc
aagcccgagcctcccaagtatggcatcgtgcaggagttcttccggaatgtgtgcggccgg
gcgccaagccccacctcggcagcaggagaagagggcaccaagaagccagaacccctctcc
ccagccagctaccatcagccggagggggtggccaggatcctgaacaagaaggcagccaag
tcaggcagcagtgaggaggccagaaccaccatgctctcccaggtggggaaggacggtgtt
ctgcgggacggagatggagccatggtccttcccaatgaggacgctgtttgtgactgtagc
acccagtctctcacttcctgcttcgcccggtcatcccgctctgcgatccgccactctcct
tccaagtgcaagcttcacccttcagagtccagctggggtggggaggagagggcggccgcc
cccagcgagtga
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