Callithrix jacchus (white-tufted-ear marmoset): 100411058
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Entry
100411058 CDS
T03264
Symbol
FREM2
Name
(RefSeq) FRAS1-related extracellular matrix protein 2 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100411058 (FREM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cjc04091
]
100411058 (FREM2)
Lectins [BR:
cjc04091
]
C-Type lectins
Lecticans
100411058 (FREM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
Motif
Other DBs
NCBI-GeneID:
100411058
NCBI-ProteinID:
XP_002749034
Ensembl:
ENSCJAG00000017883
UniProt:
A0A8I3WDA1
LinkDB
All DBs
Position
5:153985920..154185915
Genome browser
AA seq
3170 aa
AA seq
DB search
MHATGTPGLSSRGTGNSTSFQPGPPPPPRLLLRLLLLLLSLVSRVPAQPAAFGRALLSPG
LAGAAGVPAEEAIVLANRGLRVPFGREVWLDPLRDLVLQVQPGDRCAVSVLDNDALAQRP
GRLSPKRFPCDFGPGEVRYSHLGARSPSRDRVRLQLRYDAPGGAVVLPLVLEVEVVFTQL
EVVTRNLPLVVEELLGTSNVLDARSLEFAYQPETEECRVGILSGLGALPRYGELLHYPQV
PGGATEGGAPEPLLMDCKAFQELGVRYRHTAASRSPNRDWMPMMVELRSRGAPVGSPALK
REHFQVLVRIRGGVENTAPKPSFVAMMMMEVDQFVLTALTPDMLAAEDAESPPDLLIFNL
TSPFQPGQGYLVSTDDRSLPLSSFTQRDLRLLKIAYQPPSEDSDQERLFELELEVVDPEG
AASDPFAFMVVVKPMNTMAPVVTRNTGLILYEGQSRPLTGPAGSGLQNLVISDEDDLEAV
RLEVVAGLRHGHLVILGASGGSSAPKSFTVAELAAGQVVYQHDDRDGSLSDNLVLRMVDG
GGRHQVQFLFPITLVPVDDQPPVLNANTGLTLAEGETVPILPLSLSATDMDSDDSLLLFV
LESPFLTTGHLLLRQTHPPHEEQELLRGLWRKQGAFYERTVTEWLQQDITEGRLFYRHSG
PHSPGPVTDQFTFRVQDNHDPPNQSGLQRFVIRIHPVDRLPPELGSGCPLRMVVQESQLT
PLRKKWLRYTDLDTDDRELRYTVTQPPTDTDENHSPAPLGTLVLTDNPSVVVTHFTQAQI
NHHKIAYRPPGQELGVATRVAQFQFQVEDRAGNVAPGTFTLYLQPVDNQPPEILNTGFTV
QGKGHHILSETELHVNDVDTDVSHISFTLTQAPKHGHMRVSGQILHVGGLFHLEDIKLGR
VSYAHNGGKSLTDSCSLEVSDRHHVVPITLRVNVRPVDNEVPVLSHPTGTLESYLDVLEN
GATEITASVIKGNNEETDDLMLTFLLEDPPLYGEILVSGIPAEQFTQRDILEGSVVYAHT
SGEIGLLPKADSFNLSLSDRSQEWRIGGSAIQGVTLWVTILPVDSQAPEISVGEQFMVME
GDKSAITSMHISAEDIDSLNDDILCTIVIQPTSGYVENISPAPGSEKSRAGIAVSAFILK
DLRQGHINYVQSVHKGVEPVEDRFIFRCSDGINFSERQFFPIVIIPTNDEQPEMFMREFM
VMEGMSLVIDTPILNAADADVPLDDLTFTITQFPTHGHIMNQLINGTVLVESFTLDQIIE
SSSIIYEHDDSETQEDTFVIKLTDGKHSVEKMVLIMVIPVDDETPRMAINNGLEIEIGET
KIINNRILMATDLDSEDKSLVYIIRYGPGHGLLQRRKPTGAFENITLGMNFTQDQVDRNL
IQYVHLGQEGIRDLIKFDVTDGINALIDRYFYVSIGSIDIVFPDVISKGVSLKEGGKVTL
TTDLLSTSDLNSPDENLVFTITRAPMRGHLECTDQPGVSIASFTQLQLAGNKIYYIHTAD
DEVKMDSFEFQVTDGRNPVFRTFRISITDVDNKKPVITIHNLVVSESETKLITPFELTVE
DRDTPDKLLKFTITQLPIHGHLLFNSTRPVTVFTKQDLNENLISYKHDGTESSEDSFSFT
VTDGTHTDFYVFPNTVFETRRPQVMKIQVLAVDNSVPQITVNKGASTLRTLATGHLGFMI
TSKILKVEDRDSLHVSLRFIVTEAPQHGYLLNLDKGNHSITQFTQADIDDMKICYVLRGG
ADATSDMFYFAVEDGGGNKLTNQHFRLNWAWISFEKEYYLINEESKFLDVILKRRGYLGE
TSFISIGTRDGTAEKDKDFKGKAQKQVQFNPGQTRATWRVRILSDGEHEQSETFQVVLSE
PVLAALEFPTVATVEIIDPGDESTVFIPQSKYSIEEDVGELFITIRRSGDVSQELMVVCY
TQQGTATGTVPTSVLSYSDYISRPEDHTSVVRFDKDEREKLCRIVVIDDSLYEEEETFHV
LLSMPMGGRIGSEFPGAQVTILPDKDDEPMFHFSDVEYSVDENAGSVDVRVWRTGTDLST
SSSVTVRSRKTDPPSAEAGTDYVGISRNLDFAPGVNMQPIRVVILDDLGQPVLEGIEKFE
LVLRMPMNAALGEPSKATVSINDSVSDLPKMQFKERTYTGSESDGQIVTMIHRSGDVQYR
SSVRCYTRQGSAQVMMDFEERPNTDISIITFLPGETEKPCILELMDDRLYEEVEELRLVL
GTPQSNSPFGAAVGDQNETLIRIRDDADKTVIKFGETKFSVTEPKEPGESVVIRIPVIRQ
GDTSKVSIVRVHTKDGSATSGEDYHPVSEEIEFKEGETQHMVEIEVIFDEVREMREAFTV
HLKPDENMIAETQVTKAIVYIEETISMADVTFPSVPQIVSLLMYDDTSKAKESAGPVSGY
PVICVTACNPKYSDYDKTGSICASENINDTLTRYRWLISAPTGPDGVTSPMREVDFDTFF
TSSKMVTLDSIYFQPGSRVQCAARAVNTNGDEGLELMSTIVTVSREEGLCQPRVPGVVGA
EPFSAKLRYTGREDPDYTNLIKLTVTMPHIDGMLPVISTRELSNFELTLSPDGTRAGNHR
CSNLLDYTEVKTHYGFLTDATKNPEIIGEAYPYQYSLSIRGSNTLRFYRNLNLEACLWEF
VSYYDMSELLADCGGTIGTDGQVLNLVQSYVTLRVPLYVSYVFHSPVGIGGWQHFDLKSE
LRLTFVYDTAILWNDGIGSPPEAELQGSLYPTSMRIGDEGRLAVHFKTEAQFHGLFVLSH
PASFTSSVVMSADHPGLTFSLRLIRSEPTYNQPVQQWSFVSDFAVRDYSGTYTVKLLPCT
APSHQEYRLPVTCNPREPVTFNLDIRFQQVSDPVAAEFSLNTQMYLLSKKSLWLSDGSMG
FGQESDVAFAEGDIIYGRVMVDPVQNLGESFFCSIEKVFLCTGADGYVPKYSPTNAEYGC
LADSPSLLYRFKIVDKAQPETQATSFGNVLFNAKLAVDDPEAVLLVNQPGSDGFKVDSTP
LFQVALGREWYIHTIYTVRSKDNAHRGIGKRSVEYHSLVSQGKPQATTNSRKKREIRSTP
SLAWEIGAENNLGTNIQHIALDRTKRQIPHGKVPLDGILPRELNSPSSAVSLVTVVGGIA
IGLLTICLTVIAVLMCRGKESFRGKDAPKGSSSSEPMVPPQGHHNDSSEV
NT seq
9513 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcaaccgggactcccgggttatcctcgcgcgggacgggcaactccaccagcttt
caaccaggaccgccgccgccgcctcggctgctgctacggctgttgctgcttctcctgtca
ctggtaagccgcgtcccggcacagcccgctgccttcggccgggcgttgctgtcccctggt
ctcgcgggggctgcaggggtccctgctgaggaggccatagtgctggcgaaccgcggactc
cgggtgcctttcggccgtgaagtctggctggatcccctgcgtgacctggtgttgcaggtg
cagcccggggaccgctgcgcggtttcggtgctagacaacgacgcactggcccagcgaccc
ggccgcctgagtcccaagcgcttcccgtgcgactttggccctggcgaggtgcgctactcg
cacctgggcgcacgcagcccgtctcgggaccgcgtccggctgcagctgcgctacgacgct
ccgggaggggcggtagtgctaccactggtgctggaggtggaggtggtcttcacccagctg
gaggttgtgactcggaacttgcctctggtcgtggaagaactgctggggaccagcaatgtc
ttggacgcgcggagcctggagttcgcctaccagcccgagacagaggagtgccgcgtgggc
atcctgtccggcttgggcgcgctgcctcgctatggagagctcctccactacccgcaggtc
cctggaggagccacagagggaggcgccccggagcctctcctgatggactgcaaagctttc
caggaactaggggtgcgctaccgccacacagcagccagtcgctcaccaaacagggactgg
atgcccatgatggtggagttgcgttcgcgaggggctcctgtgggcagccctgctttgaaa
cgcgagcacttccaggtgctggtgaggatccgaggaggggtcgagaacactgcacccaag
cccagttttgtggccatgatgatgatggaggtggaccagtttgtactgacagccctgacc
ccagacatgctggcagccgaggatgccgagtctcccccagacctgttgatcttcaacctc
acctctccattccagcctggccagggctacttggtaagcaccgatgatcgcagcctgccc
ctttcctccttcacccagagggatctgcgcctcctgaagattgcctaccagcccccctct
gaagactccgaccaggagcgtctctttgaactggaactggaggtagtggacccagaagga
gcagcttcagacccttttgccttcatggtagtggtgaagcccatgaacacaatggctccg
gtggtcacccggaatactgggcttattctctatgagggtcagtctcgacctctcacaggc
cctgcaggcagtggtctgcaaaacttggtcattagcgatgaggacgacctagaagcagtg
cggctggaggtggtggctgggctccggcatggtcaccttgtcattctgggtgcttccggg
ggcagctctgctcccaagagctttacagtggctgagctggcagctggccaggtggtctac
cagcatgatgacagagatggctcactgagcgataacctggtgcttcgcatggtggatgga
ggaggcaggcaccaggtacaatttctgtttcccatcaccttagtgcctgtggatgaccag
ccacctgtcctcaatgccaacacggggctgacactggcagagggtgaaacagtgcccatc
ctgcccctttccctgagtgcgactgacatggattcagatgattctctgctcctttttgtg
ctggaatcccctttcttaactactgggcatctgcttctccgccaaactcaccctccccat
gaggaacaggagcttctcaggggcctttggaggaagcagggagcattttatgagcgaaca
gtgacagagtggctgcagcaggacataacagagggcaggctcttctacagacactccggg
ccccatagtcctgggccagtcacagaccagttcacatttagagtccaggataaccatgac
cctcctaatcagtctgggctacagcggtttgtgatacgtatccatcctgtggatcgcctc
cctccagagctgggcagtggctgtccccttcgtatggtggtacaggaatcccagctcaca
ccactgaggaagaagtggctgcgctacactgacctagacacagatgaccgagaactacgt
tacacagtgactcagccccccacggacacagatgaaaaccactcgccagccccactgggt
accttggtcctgactgacaacccctcagtcgtggtgacccattttacccaagcccagatc
aaccatcataaaattgcttacagacctccgggtcaagaactgggtgtggctactcgagtg
gcccagttccagttccaggtggaagaccgagctgggaatgtggctccaggcacctttacc
ctttacttgcagcccgtggacaaccagccacctgagatcctcaacaccggcttcactgtt
caggggaagggtcaccacatcctgagtgagacagagttgcatgtgaatgatgtggacact
gatgtctcccatatctctttcactctcacacaggcacccaaacatggccacatgagagtg
tctggacagatcctgcatgtagggggtctcttccacttggaggacataaaactgggccga
gtttcctatgcccataatgggggcaagtccctgaccgatagctgctccttggaagttagc
gacagacatcatgtggtgcccatcactctcagagtgaatgtccggccagtggacaatgag
gtgcccgtactgagccatcctactggcacactggagtcttatctagatgtcttagaaaat
ggggctactgaaatcactgccagtgttattaaggggaacaatgaggaaactgatgacttg
atgttgacttttctcttggaagatccacctttgtatggggaaatcttggtcagtggcatt
ccagcagagcagtttactcaaagggacatcttagagggctccgttgtatatgcccacacc
agtggtgagataggccttttgcctaaagcggattcttttaacctgagtctgtcagatagg
tctcaagaatggagaattggtggcagtgctatccaaggagttactctatgggtgactatc
ttgcctgtcgatagccaggccccggaaatctctgtaggtgaacagtttatggtaatggaa
ggtgataaaagtgctataacgtcaatgcatataagtgctgaagatattgattccttgaat
gatgacatcttgtgcactatagttattcaacctacctcaggttatgtcgagaacatatct
ccagcaccaggctctgagaaatcaagagcagggattgcagtaagtgctttcattttgaaa
gatctcaggcagggccacataaactacgtccagagtgtccacaaaggggtggaacctgtg
gaggaccgatttatatttcgttgttctgatggcattaacttttcagagagacagttcttc
cccattgtaatcattcccaccaacgatgaacagccagagatgtttatgagagaatttatg
gtgatggaaggcatgagtctggtcatcgatacacccattctcaatgctgctgatgctgat
gttcccctggatgatttaactttcactattacccaattcccgactcatggtcacattatg
aatcagctgataaatggcacggtgttggtcgaaagcttcaccttggaccagatcatagag
agctccagcattatttatgagcatgatgactctgagactcaggaagacacttttgtgatt
aaactaacagatgggaagcactctgtggaaaagatggtcctcattatggttatccctgtt
gacgatgagacacccagaatggccatcaataatggactagaaatagaaattggcgaaacc
aagattatcaacaacagaatattaatggcaacggatttagattcagaagacaaatctttg
gtttatattattcgttatgggccaggacacggcttattacagagacgaaaacctactggt
gcctttgaaaatatcacactgggcatgaattttacccaggatcaagtagacagaaattta
attcagtatgtccatttggggcaagagggcattcgggacctaattaaatttgatgtgact
gatgggataaatgccctcatagatcgttacttttatgtgtccatcgggagcattgacatt
gtcttccctgatgtcataagtaagggagtgtccttgaaagaaggtggcaaggtcactctc
acaacagacctactaagcactagtgacttgaacagtcctgatgaaaacttggtttttacc
atcaccagggctcccatgagaggtcacctggagtgcacagatcagcctggagtgtccatc
gcatctttcactcagctgcaactggctggaaacaaaatctattacatccacacagctgat
gacgaagtgaagatggacagttttgagtttcaagttactgatggacgtaaccctgtcttt
cggacattccgtatctccattactgatgtggacaataaaaagccagtgatcaccatccac
aacctggtcgtcagtgaaagtgaaaccaagctgattaccccctttgaactcactgtggaa
gacagagatactcctgacaagctcctgaaattcactatcactcagttgcctattcatggc
catctcctattcaacagtaccagacctgtcacggtttttaccaagcaagacttgaatgaa
aacttaatcagctacaaacatgatggtaccgagtcaagcgaagatagcttctccttcaca
gtgactgatggcacccatacagacttctacgtttttcccaatacggtatttgaaacaagg
agaccccaagtgatgaagatccaggtcttagctgttgacaacagtgtcccccaaatcaca
gtgaataagggggcctctacacttcgcactctagccactggccacttggggttcatgatc
acaagcaaaatattgaaagtggaggacagagacagcctacacgtttctctgaggtttatt
gtgacagaggcccctcaacatgggtatctcctcaacctggacaaaggcaaccacagcatc
actcagtttacccaagctgacattgatgacatgaaaatatgctatgtcttaagaggaggg
gctgatgccacaagtgatatgttctattttgcggttgaagatggtggtggaaacaagtta
accaaccagcattttcgtctgaattgggcatggatctccttcgaaaaggaatattacctg
atcaatgaggaatccaaatttctagatgtcattcttaaacgcagaggttacttgggagaa
acttcttttataagtattggcacaagagatgggactgcagagaaagacaaagacttcaag
ggcaaagcacagaaacaagtgcagttcaacccaggccagaccagggccacgtggcgagtg
cggatcctgagtgacggggagcatgagcagtctgaaacctttcaggtggtcctctcggag
cccgtgctggctgccctggaattccccacagtggccactgttgagataattgacccagga
gatgaatcaaccgtatttattccccagtccaaatactccattgaagaagatgttggtgag
ctgttcattaccatcaggaggagcggggatgtgagccaggagttaatggtggtctgctat
acccaacaaggaacagcaactggaactgtgccaacttccgtgttatcttactccgattac
atatccaggcctgaggaccacaccagtgttgtccgctttgacaaagatgaacgggagaaa
ctgtgtcggatagtcgtaattgacgactccttgtatgaggaggaggaaactttccatgtc
cttctgagcatgcccatgggagggagaatcggatcagagttcccaggggctcaggttaca
atccttcctgacaaagacgatgaacccatgttccacttcagcgatgtggaatactccgtg
gatgagaacgccggttccgtggacgtgcgggtgtggagaacgggcacggacctgtccacg
tcctctagtgtcacagtgagatctcggaaaacagatcctccctctgcagaggctggaaca
gactatgtgggcatcagtcgtaatttagattttgcacctggagtcaacatgcagcccatt
cgtgttgtcattctggatgatctaggacaaccagtgctggagggaattgagaaatttgaa
ctggtgcttcgtatgcctatgaacgcagcccttggcgagcccagcaaagccacagtgtcc
ataaatgactctgtctctgatttgccgaagatgcagttcaaagaacgaacatatactggc
agtgaaagtgatgggcagatagtcacaatgatccacaggagtggggatgtccagtacaga
tcttcagtgagatgctacacccggcaggggtctgcacaggtgatgatggactttgaagaa
cgcccaaacactgatatctccatcattacattcctccctggtgagacggaaaagccttgc
atccttgagctgatggatgacaggctctatgaggaggtcgaggaactccgcctggtactc
ggcactccacagagcaactctccctttggggctgcagttggtgaccaaaacgaaactctc
ataaggatccgagatgatgctgataagactgttattaaatttggagaaaccaaatttagt
gtcactgaacccaaagaacctggagagtcagtggttataagaattccagtgattcgccaa
ggagacacttcaaaggtttccatcgtgagagtccacaccaaggatggttccgccacctct
ggagaagactaccaccctgtgtcagaagaaattgagtttaaggaaggagaaacccagcac
atggttgaaatcgaagttatctttgatgaggtgagagagatgagagaggccttcactgtt
cacctaaagcctgatgaaaatatgatagcagagacgcaggtgactaaagccattgtgtat
atagaagaaacgatcagcatggcagatgtcactttcccttctgtccctcaaattgtgtcc
ctgctgatgtatgatgacacttccaaagctaaggagagtgctggacccgtgtctggctat
cctgtcatctgtgtcacagcttgcaaccccaaatattcagattatgataaaacaggttct
atctgtgcaagtgagaacatcaatgacactttgacccggtaccggtggctgattagtgca
cccacaggccctgatggtgtgaccagccctatgagagaagtggacttcgacacctttttt
acgtcatccaagatggtcacgctggactccatatactttcagcctggctcccgcgtgcag
tgtgcagctcgtgctgtgaacaccaacggggatgaaggcctggagctcatgagcactatc
gtaaccgtaagcagagaagaaggtctctgtcagccgcgtgtacctggggttgtcggggca
gagccgttctcagctaagttgcgatatacaggccgtgaggacccagactacacaaacctt
atcaagctcactgtcacgatgccgcacatagacggcatgcttcctgtgatctccaccaga
gagctttccaactttgagctcaccctcagcccggatggcacgagggctggaaaccacagg
tgctccaacctcctggattataccgaagtgaagactcattatggtttcttgactgatgct
accaaaaacccggaaataattggcgaggcatatccttaccagtacagcttgtctatcaga
ggttccaataccttacgcttctaccgaaacctgaacctagaggcctgtttatgggagttt
gttagctactacgacatgtcagaactccttgctgactgtggtggcaccatcggaacagat
ggacaggtcctaaacctagtgcagtcctatgtgacccttcgagtccccctgtatgtttcc
tacgtgttccattcccctgtggggataggaggctggcagcattttgacttgaagtcagag
cttcgtctgacttttgtgtatgacactgccatcttgtggaatgatgggattggcagcccc
ccagaggctgaacttcaaggttccctctacccaaccagcatgcgcatcggtgacgagggg
cgcttggccgtgcacttcaaaacagaggctcagttccatggcttattcgtgttgtcacat
cccgcatcctttacaagctcagtggtcatgtcagctgatcatccgggcctgacattttcc
ctccgcctcataaggagtgaaccaacctataaccagccagtacagcagtggagctttgtc
tctgactttgccgtacgtgactactctgggacctatactgtgaagctgctgccatgcacc
gccccatcgcatcaggaataccgcctgccagtcacctgcaaccccagggagcctgtcacc
tttaaccttgacattcgattccaacaggtcagcgatccagtggctgctgagtttagcttg
aacacccagatgtacctgctctctaagaagagtctctggttgtctgatggctccatggga
ttcgggcaagagagtgatgttgcttttgcagaaggtgatataatttatggtcgtgtcatg
gtggatccggtccagaacctgggtgaatcctttttctgcagcattgagaaggtgtttcta
tgcactggagccgatggctatgttcccaagtatagtccaacgaatgcagaatatggctgc
ttagccgactctccttccctcttatatagatttaaaattgtggacaaagctcagccagag
acacaagctaccagttttggaaatgtcctatttaatgccaaactagcagtggatgaccct
gaagctgttctcttagtgaatcagcctggatctgatggatttaaagtcgactcaacaccc
ctctttcaggtcgctctgggccgagaatggtacatacatacgatctatacagtgagatca
aaagacaatgcccaccgaggtattggcaagagaagcgtggagtatcattctctggtgagt
caaggaaagccccaagccaccaccaacagccggaagaagagagagatcaggagcacaccc
tcgctggcatgggagattggtgctgaaaacaatctgggaacaaacatccagcacattgcc
ctggaccgcaccaagaggcagatcccccatgggaaagtacctctggatggcatccttccc
cgggagctcaacagccccagctctgcagtcagcctggtcactgtggtgggaggcatcgcg
atagggttactcaccatctgcctcactgtcatcgcagtactgatgtgcaggggcaaggaa
agtttcagggggaaggatgccccgaagggctccagcagcagcgagcccatggtgccccca
cagggccatcacaatgacagctcagaagtttga
DBGET
integrated database retrieval system
