Callithrix jacchus (white-tufted-ear marmoset): 100411320
Help
Entry
100411320 CDS
T03264
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100411320 (SEMA6D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
100411320
NCBI-ProteinID:
XP_009003635
Ensembl:
ENSCJAG00000001936
UniProt:
F7H9T7
LinkDB
All DBs
Position
10:31186478..31201450
Genome browser
AA seq
1086 aa
AA seq
DB search
MRVFLLCAYILLLMVSQLRAISFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEMPKTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDAKQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQISGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGVAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR
LTAITVDHSAGPYQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSILLEEIDAYNHAKCNAE
NEEDKKVISLQLDKDHHTIYVAFSSCVIRIPLSRCERYGSCKKSCIASRDPYCGWLSQGS
CGRVTPGMLLLTEDFFAFHNHSAGGYEQDTEFGNTAHLGDCHEILPTSTTPDYKIFGGPT
SDMEVSSSSVTTVASIPEITPKVIDTWRPKLTSSRKFVVQDDPNTSDFTDPLSGIPKGVR
WEVQSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSC
TDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPE
LAALPTPESTPVLHQKTLQAMKSHSEKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSA
IVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLN
DPNSNPKAIMGDIQMAHQNLMLDPMGAMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDV
PTTPGVPMTSLERQRGYHKNSSQRHSISAMPKNLNSPNGVSLSRQPSMNRGGYMPTPTGA
KGDYIQGTPGSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTPSVRP
LNKYTY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgagggttttcctgctttgtgcctacatactgctgctgatggtttcccagttgagagca
atcagctttcctgaagatgatgaacctcttaatactgtcgactatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaacgaatcgcagcacaggctggactttcag
ctgatgctgaaaattcgagacacactttatattgctggcagggatcaagtttatacagta
aacttaaatgaaatgcccaaaacagaagtaataccaagcaagaaactgacatggcgatca
agacaacaggatcgagaaaactgtgctatgaaaggcaagcataaagatgaatgccacaac
tttatcaaagtatttgttccaagaaacgatgagatggtttttgtttgtggtaccaatgcc
ttcaatcccatgtgtagatactataggttgagtaccttagaatatgatggggaagaaatt
agtggcctggcaagatgcccatttgatgccaaacaaaccaatgttgccctctttgctgat
gggaagctgtattctgccacagtggctgacttcttggccagtgatgccgttatttatcga
agcatgggtgatggatctgcccttcgcacaataaaatatgattccaaatggataaaagaa
ccacactttcttcatgccatagaatatggaaactatgtctatttcttctttcgagaaatt
gctgtcgaacataataatttaggcaaggctgtatattcccgtgtggcccgcatatgcaaa
aatgacatgggtggatcccagcgggtcctggagaaacactggacttcatttctgaaggct
cggctgaactgttctgtccctggagattcgtttttctactttgatgttctgcagtctatt
acagacataatacaaatcagtggcatccccactgtggtcggggtgtttaccacacagctc
aacagcatccctggttctgctgtctgtgcatttagcatggatgacattgaaaaagtattc
aaaggacggtttaaggaacagaaaactccagattctgtgtggacagcagttcccgaagac
aaagtcccaaagccaaggcctggctgttgtgcaaaacacggcgttgctgaagcttataaa
acctccatcgatttcccagatgaaaccctgtcattcatcaaatctcatcccctgatggac
tctgccgttccacccattgccgatgagccctggttcacaaagactcgggtcaggtacaga
ctgacagccatcacggtggaccattctgccgggccctaccagaactacacagtcatcttt
gttggctctgaagctggcgtggtacttaaagttctggcaaagaccagtcctttctctttg
aatgacagcatattactggaagagattgacgcctataaccatgcaaagtgcaatgctgag
aatgaggaagacaaaaaggtcatctcattacagttggataaagatcaccacactatatat
gtggcattctctagctgcgttatccgcatccccctcagtcgctgtgaacgttacggatcg
tgtaaaaagtcttgtatcgcatctcgtgacccgtattgtggctggttaagccagggatcc
tgcggtagagtgaccccagggatgctgctgttaaccgaagacttctttgctttccataac
cacagtgctggaggatatgagcaagacacagaatttggcaacacagctcatctaggggac
tgccatgaaattttgcctacttcaactacaccagattacaaaatatttggcggtccaaca
tctgacatggaggtatcttcatcttctgttaccacagtggcaagtattccagaaatcaca
cctaaagtgattgatacctggagacctaaactgacaagctctcggaaatttgtagttcaa
gatgatccaaacacttctgattttactgatcctttatcgggtatcccaaagggtgtacga
tgggaagtccagtctggagagtccaaccagatggtccacatgaatgtcctcatcacctgt
gtttttgctgcttttgttctgggggcattcattgcaggtgtggcagtatactgctatcga
gacatgtttgttcggaaaaacagaaagatccataaagatgcagaatccgcccagtcatgc
acagactccagtggaagttttgccaaactcaatggtctctttgacagccccgtcaaggaa
taccaacagaatattgattctcctaaactgtatagtaacctgctgaccagtcggaaagaa
ctaccacccaatggagatactaaatccatggtaatggaccatcgagggcaacctccagaa
ctggctgctcttcccactcctgagtctacacctgtacttcaccagaagaccctgcaggcc
atgaaaagccactcagaaaaggcccatggccatggggcttcaaggaaagaaacccctcag
ttttttccctctagtccgccacctcactccccgttaagtcatgggcacatccccagtgcc
attgttcttccaaatgctacgcatgactacaacacgtctttctcaaactccaatgctcac
aaagccgaaaagaagcttcaaaacatcgatcaccctcttacaaagtcatccagtaagaga
gatcaccggcgttctgtcgattccagaaatacactcaatgatctcctgaagcatctgaat
gacccaaatagtaaccccaaagccatcatgggagacatccaaatggcccaccagaactta
atgctggaccccatgggagccatgtctgaggttccacctaaagttcctaaccgggaggca
tcgctgtattcccctccttcaactctccccagaaatagccccaccaagcgagtggatgtc
cccaccactcctggagtcccaatgacttctctggaaagacaaaggggttatcacaaaaat
tcctcccagaggcactcaatatctgctatgcctaaaaacttaaactcaccaaatggtgtt
tcgttatccagacagcctagtatgaaccgtggaggatatatgcccacccccactggggca
aagggggactatattcagggaacaccagggagtgttcatctgcagccttccctctccaga
cagagcagctacaccagtaatggcactcttcctaggacgggactaaagaggacaccgtcc
ttaaaacctgatgtgccaccaaagccttcctttgttcctcaaaccccatctgtcagacca
ctgaacaaatacacttactag
DBGET
integrated database retrieval system
