Callithrix jacchus (white-tufted-ear marmoset): 100411412
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Entry
100411412 CDS
T03264
Symbol
CYFIP1
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04810
Regulation of actin cytoskeleton
cjc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100411412 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100411412 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100411412 (CYFIP1)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100411412 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
100411412 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
LRIF1
Motif
Other DBs
NCBI-GeneID:
100411412
NCBI-ProteinID:
XP_054113137
Ensembl:
ENSCJAG00000005289
LinkDB
All DBs
Position
6:160166..264481
Genome browser
AA seq
1385 aa
AA seq
DB search
MAAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIAGYEELLAD
IVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDSAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTV
YAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYLVRTMAESLGSAELLRQLKSLGMERLLHAVNTFLRQSCSY
LPLLTFGGKMSFVSLDIYXTETSCSTTSCSFPQAAATQPHRQAPGPXGELVRDPLSQGIA
EQSSRGLSEFGVTNIPCIFSPPQTFPWIIQLYMVRTMLESLIADKSGSKKTLRSSLEGPT
ILDIEKFHRESFFYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWIL
TDHILETKEASMMEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLAD
QIFAYYKVMAGSLLLDKRLRSECKNQGATIHLPPSNRYETLLKQRHVQLLGRSIDLNRLI
TQRVSAAVYKSLELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDSFDAMFREA
NHNVSAPYGRITLHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYL
HGSKALNLAYSSIYGSYRHFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQY
VKTLMEVMPKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCL
LIEQSLSLEEVCDLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGT
PQQIAIAREGDLLTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFH
RLWSAMQFVYCIPVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQK
HDGKDEIIKNVPLKKMVERIRKFQILNDEIITILDKYLKSGDGESTPVEHVRCFQPPIHQ
SLASS
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccaggtgacactggaggacgcgctgtccaacgtggacctcctggaggagctg
cccctgcccgaccagcagccctgcatcgagcccccaccatcctcgctgctctaccagcca
aatttcaacactaactttgaagacagaaatgcatttgtcactggcatcgcgagatacatt
gagcaagccaccgtccactctagcatgaacgagatgctggaggagggccaagaatatgct
gtcatgctgtacacctggaggagctgctcccgggccatcccacaggtgaaatgtaacgag
cagcctaacagagtggaaatttatgagaaaactgtggaggttctggagcctgaggtcaca
aaactgatgaattttatgtacttccagagaaacgccattgagcgtttctgcggggaggtg
aggcgcctgtgccacgcggagaggaggaaggactttgtgtccgaagcctacctgatcacc
ctgggcaagttcatcaacatgtttgcagtgctggatgagctgaagaacatgaagtgcagt
gtgaagaatgaccactcggcatacaagagggctgctcaatttctgcgtaaaatggcagat
ccacagtccatccaggaatcgcagaatctgtccatgttcctggccaatcacaacaagatc
acacagtctctgcagcagcagctcgaagtgattgctggctatgaagagctcctggcagac
atcgtgaatctgtgtgtggattactatgagaacaggatgtatttgacgcccagtgagaaa
cacatgcttctcaaggtgatgggatttggtctgtacctgatggatgggagtgtcagtaac
atctataagttagatgccaagaaaagaataaacttatccaaaattgacaagtacttcaag
caactccaggtggttccactatttggggacatgcaaatagaactggcaagatacatcaag
accagcgcccactacgaggaaaataaatctcggtggacgtgcacatcctccagcagcagc
cctcagtacaacatctgtgagcagatgatccaaatccgtgaggaccacatgcgcttcatc
tcggagctggcacgctacagcaacagcgaggtggtcacaggctcaggccgccaggaggcc
cagaagacggacgccgagtaccggaagctgtttgacctggcgctgcagggcctgcagctg
ctgtcccagtggagcgcgcacgtgatggaagtgtattcgtggaagcttgtgcaccccacc
gacaagtactccaacaaggactgccccgacagcgccgaggagtatgagcgcgccacgcgt
tacaactacaccagcgaggagaagttcgccctggtggaggtgatcgccatgatcaaaggc
ctgcaggtgctgatgggcaggatggagagcgtgttcaaccacgccatccggcataccgtc
tacgccgcactgcaggacttctcccaggtgaccctcagggagccactgcggcaggccatc
aagaagaagaagaacgtcatccagagtgtcctgcaggccatcaggaagaccgtgtgcgac
tgggagacggggcatgagcccttcaatgaccccgccctgcggggtgagaaggaccccaag
agcggcttcgacataaaagtgccacgccgcgccgtgggaccctccagcactcagctctac
ctggtccgcaccatggctgagtccttgggctcggccgagctgctcaggcagctcaagtct
ctgggcatggagaggctcttgcatgcggttaacacgtttctgaggcagtcgtgcagctac
ctcccccttttaacctttggtggtaagatgtcgtttgtttctcttgacatttatnncacg
gagacaagctgctccaccacaagctgttctttcccccaagcagcagcaacgcagccgcat
aggcaggcaccgggccccntcggggagctggtgcgggaccctctcagtcagggcatagcg
gagcagtcctctcgtgggctttctgagtttggcgtaactaacataccgtgtatattttct
cccccacaaacgtttccttggataatccagctttacatggtgagaaccatgctagagtcc
ctcattgcagacaaaagtggttccaagaaaaccttgagaagtagccttgaggggcccacc
atattggacattgaaaaatttcatcgagagtcgttcttctacactcacttgataaatttc
agtgaaacgctgcagcagtgctgtgacctttcacagctgtggttccgagagttcttcctg
gagctgaccatgggccgcaggatccagttccccatcgagatgtccatgccctggatcctg
acggaccacatcctggagaccaaggaggcgtccatgatggagtacgtgctctactccctg
gacctatacaatgacagcgcccactacgcgctcaccaggttcaacaagcagttcctctac
gatgaaatcgaggctgaggtgaatctatgttttgaccaatttgtttacaagctggcagac
cagatatttgcatattacaaggttatggcaggaagtttgcttcttgataaacggttacga
tcagaatgcaagaatcagggagccacaatccacctcccgccgtctaaccgctacgaaacg
ctgctgaagcagaggcatgtgcagctcctcggcaggtccatagacctcaatcgtctgatc
acccagcgcgtctcagctgccgtatataagtccttggaactggcgattggacgatttgaa
agtgaagatttgacctccatagttgagctggacggcctgttggaaatcaaccgcatgacc
cacaagctgctgagccggtacctgacgctggacagcttcgacgccatgttccgggaggcc
aaccacaacgtgtctgcgccctacgggaggatcaccctgcacgtcttctgggagctcaac
tacgacttcctgcccaactactgctacaatggctctaccaaccggtttgttcggacagtg
ttaccattttctcaggaatttcaaagagataagcagcctaatgcacagccccagtatctg
catggatccaaggctctgaacttggcctactccagcatttacggcagctaccggcacttc
gtggggcctccgcatttccaagtcatctgccggctccttggctatcagggtattgctgtg
gtcatggaggagctgttgaaggttgtcaagagcctgctgcagggcaccatcctgcagtac
gtgaagacactgatggaggtgatgcccaagatctgccgcctgccccggcacgagtacggc
tctcccggtatcctggagttcttccaccaccagctgaaggacattgtggagtacgcggag
ctgaagaccgtgtgcttccagaaccttcgggaggtggggaatgctgtcctcttctgcctg
ctcatcgagcagagcctgtctttggaagaagtctgcgacctcctgcatgcggctcccttc
cagaatatcttgccacgagtccatgtgaaagagggagagagacttgatgccaaaatgaaa
aggctagaatcaaagtacgccccgctgcatcttgtcccactgattgaaagactggggacc
cctcagcaaattgccatcgcgagagagggggacctgctgaccaaggagcgcctctgctgc
ggcctgtccatgtttgaggtcatcctgacacggatccggagctttctggacgacccgatc
tggcgtgggcctctgcccagcaatggagtcatgcatgtggatgagtgtgtggagttccac
agactgtggagtgccatgcagtttgtgtactgcattcccgtagggacacacgagttcaca
gtcgagcagtgctttggtgacgggctacactgggctggctgcatgatcatcgtactcctt
gggcagcagcggcgttttgctgtgctggatttctgctaccatctacttaaggtccagaaa
cacgatggcaaagacgagattattaaaaatgtgcctttgaagaagatggtggagagaatt
cgcaagttccagattctcaatgacgagatcatcaccatcctggataagtacctgaagtca
ggcgacggggagagcaccccagtggagcacgtgcgctgcttccagccacccatccaccag
tccttggccagcagctga
DBGET
integrated database retrieval system
