Callithrix jacchus (white-tufted-ear marmoset): 100411450
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Entry
100411450 CDS
T03264
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04270
Vascular smooth muscle contraction
cjc04360
Axon guidance
cjc04611
Platelet activation
cjc04625
C-type lectin receptor signaling pathway
cjc04810
Regulation of actin cytoskeleton
cjc05135
Yersinia infection
cjc05152
Tuberculosis
cjc05163
Human cytomegalovirus infection
cjc05200
Pathways in cancer
cjc05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100411450 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
100411450 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
100411450 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
100411450 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
100411450 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100411450 (ARHGEF12)
05205 Proteoglycans in cancer
100411450 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
100411450 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
100411450 (ARHGEF12)
05152 Tuberculosis
100411450 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100411450 (ARHGEF12)
Membrane trafficking [BR:
cjc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100411450 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
100411450
NCBI-ProteinID:
XP_002754488
Ensembl:
ENSCJAG00000014200
UniProt:
U3D1J4
LinkDB
All DBs
Position
11:17765865..17917901
Genome browser
AA seq
1544 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERIASHDFDPTDSSSKKTKSSSEE
SRSEIYGLVQRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVEPSVIGHMSPIMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYNRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAVVTPSRPLGDTLTVSEAETDPGDGLGRTDCSSGDAS
RPSSDNADSPKSGLKERIYLEENPEKSETIQDVDTQSLVGSPSTRIAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKHTNSKETRR
IFLEFHQFFLDRSAHLKVSVPDEMSVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKLDAERDKDRLTLEKERTCAEQIVAKIEEVLMTAQAVEEDK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDKEGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMELQKARHPKHLSTPSSVSPEPQDSAKLRQSGLANEGTDTGY
LPANSMSSVASGASFSQEGGKENDTGSKQVGETPAPGDSLDGTPRTLNTVFDFPTPPLDQ
VQEEECEVERVTEHGTPKPFRKFDSVAFGESQSEDEQFENDLETDPPNWQQLVSREVLLG
LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDVLQ
LHIGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSSLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTADSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPQSPPGEGDNDEEDPSKLKEEQHGISVTSLQSPDRDLGLESTLISSKPQPHSLSTS
GKSEVRDLFVAERQFAKEQHTDGTLKEVGEDYQITIPDSHLPISEERWALDALRNLGLLK
QLLVQQLGLAEKSTQEDWQHFPRYRTASQGAQTDSVIQNSENIKACHSSEGHMPFRTGTG
DIATCYSPRTSTESSAPRDSVVLPPQDSQASNILVMDHMIMTPEMPTTEPEGGLDDSGEH
FFDAREAHSDENPSERDGVVNKEEKEVNLRISGNYLILDGYDTVQESSTDEEVASSLTPQ
PMTGISAVDSPHQQQHSPQNAHSDGVVSPFTPEFLVQQRWGAMEDSCFEIQSPSSCADSQ
SQIMEYIHKIEADLEHLKKVEESYTILCQRLAGSALTDKHSDKS
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgagcgcattgca
tcacatgattttgaccccacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatccgagatatatggtcttgttcagcgttgcgtgatcatccagaaagatgacaat
ggatttgggctgacggtcagtggagacaatccagtcttcgtacagtctgtcaaagaagat
ggagcagccatgcgggctggagtacagacaggtgatcgaatcatcaaggtgaatggaact
ctggtgactcattcaaatcatctggaggtggtgaagctaatcaaatctggttcctatgta
gctctcactgttcagggacgcccacctgggtcgccccagattccacttgccgattctgaa
gtagagccatcagtcattggacatatgtctcccatcatgacatctcctcattcacctgga
gcatctgggaatatggagagaatcactagtcctgtactcatgggggaggaaaacaatgtg
gttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaggaacggcta
cagttattgcaggaagattacaaccgaacacctgcccaaagattgctaaaagagatccaa
gaggccaagaaacacattcctcagctgcaagagcagttatccaaagccacaggctctgct
caggatggagctgtagttacaccctccagacctttaggtgacaccctaacagtcagtgag
gcagaaacagatcctggagatggactgggcaggactgactgtagcagtggagatgcttct
cggcccagtagtgacaatgcagatagtcccaagagtggcctgaaagagaggatttatcta
gaggaaaacccagagaaaagtgaaacaattcaggacgttgatactcaatcactcgttgga
agtccctcaacccgtatagcacctcatattattggagcagaagatgatgatttcggtacc
gaacatgaacagatcaatggacagtgcagctgtttccagagcattgaattactaaaatct
cgtccggctcatttggctgttttcttacaccatgtagtttcacaatttgaccctgccacc
ttgctctgttacctctattcagacctgtataaacataccaattccaaggaaactcgtcgc
atcttccttgagtttcatcagttcttcctagatcgatcagcacacctgaaagtttctgtt
cctgatgaaatgtctgtagatctagaaaagagaagacctgagctcattcctgaggatcta
catcgccactatatccaaactatgcaagaaagagtccatccagaagttcaaaggcactta
gaagactttcggcagaaacgtagtatgggactgacattggctgaaagtgagctgactaaa
cttgatgcagagcgagacaaggaccggttaactttggagaaggagcggacatgtgcagaa
cagattgtggccaaaattgaagaagtattgatgactgctcaggctgtagaggaagataag
agttccaccatgcagtatgttattctcatgtatatgaagcatttgggagtaaaagtgaaa
gagcctcgaaatttggagcacaagcggggtcggattggatttcttccaaaaatcaagcaa
agtatgaagaaagataaagaaggggaagaaaaagggaagcgaagaggattccccagtatc
ctgggacccccacggagaccaagccgtcacgacaacagtgcaattggcagagccatggaa
ctacagaaggcgcgccaccctaagcacttatccacaccctcatctgtgagtcctgaacct
caggactctgccaagttgcgccagagtgggttagcaaatgaaggaacagacactggatac
ctgcctgccaattccatgtcttctgtagcttcaggggcctctttttcccaggaaggaggg
aaagagaatgatacaggatcaaagcaagttggagaaacaccagcacctggagacagctta
gatggcacccctcgtactctcaatactgtctttgatttcccaacacctccgttagaccaa
gtgcaggaggaggaatgtgaagtagaaagggtgactgaacatgggactccaaagcccttt
cgaaagtttgacagtgtagcttttggagaaagtcaaagtgaggatgaacaatttgaaaat
gacttagagacagatccacccaactggcagcagcttgttagtcgagaagtgttattggga
ctaaaaccttgtgagatcaagagacaggaagtgattaatgaattgttctacactgaaaga
gctcatgttcgaacactgaaggttcttgatcaagtgttctatcagcgagtgtccagagaa
ggaattctgtcgccctcagagctacggaaaattttttcaaacttggaagatgttcttcaa
cttcatattgggttgaatgaacaaatgaaggccgttcgaaagaggaatgagacctctgtt
atcgatcagattggggaagatttgcttacgtggttcagcggaccaggagaggagaaattg
aaacatgctgctgctaccttttgcagtaaccagccttttgccctggaaatgatcaagtct
cgtcagaaaaaggattctcgatttcagacttttgtgcaagatgctgaaagtaatccactg
tgtcgtcgtcttcaactgaaggatattatacccacccaaatgcaaagacttactaagtac
ccacttctattggataacattgccaaatacacagaatggccaacagaaagggagaaggtg
aagaaagctgcagatcactgtcgtcagatcttaaattatgtaaatcaggctgtcaaggag
gcagaaaataaacagcgcttagaagattatcagcgtcgccttgatacctccagcctgaag
ttgtcagagtacccaaatgttgaagagctcaggaatttggatttaacgaaaaggaagatg
attcatgaagggccattggtttggaaggtgaatagagataaaactattgatttatataca
ttgctgctggaagacattcttgtattgttacaaaagcaagatgacagactggtgttaagg
tgtcatagtaagattctggcatctacagctgatagtaaacacacgttcagccctgtcatt
aagttgaatacagtgttggttcgacaagtggcaacagataacaaagctttattcgtcatc
tccatgtcagacaatggagctcagatttatgaactggtggcacagacagtttctgaaaag
actgtctggcaggacctaatctgtcggatggctgcgtcagtgaaggagcaatccacaaag
ccaattccattaccacagtcaccaccgggcgaaggagataatgatgaagaagatccttca
aaattaaaagaggaacagcatggcatttcagtcaccagtttgcagagtccagacagagat
ttgggattagaatctaccttaatatcatcaaaacctcagcctcattcactgagcacctct
ggaaaatcagaggtacgtgatctctttgtggctgagagacagtttgcaaaggaacaacat
acagatgggacactaaaggaagttggagaagattatcaaatcacaatcccagattcacac
ctgcctatttcagaagaacggtgggcattggatgcactaagaaacttgggtttgttgaag
cagttgctggtacaacagctgggtttggctgagaagagcactcaggaagactggcaacat
ttcccaagatacaggacggcctctcagggggcacagacagacagtgtcatccagaactct
gaaaatattaaggcctgtcattctagtgaaggacatatgccctttagaactggaactggt
gacattgcaacttgttacagtccacggacttcaactgaatcttctgctccacgggattca
gtggtattgccaccccaagatagccaggcaagtaacattttagtaatggaccacatgatt
atgaccccagagatgcctaccacagagccagaagggggtcttgatgacagtggagagcac
ttttttgatgcccgtgaagcacatagtgatgagaatccatcagaacgtgatggagtggta
aacaaggaagagaaggaggttaatttacgcatctcaggaaactatttgatccttgatggc
tatgacacagtgcaggagagttccacagatgaggaggttgcttcctcacttaccccgcag
cccatgacaggcatctctgctgtggactccccccaccagcagcaacattctcctcagaat
gctcactctgatggggtagtttcaccattcacccccgaatttctggtccagcagcgctgg
ggagctatggaggattcctgttttgagatccagagtccctcctcttgtgcagattcacag
agccagatcatggagtacattcataagatagaggctgaccttgaacacttaaagaaggtg
gaggaaagttacaccattctttgccaaaggctggctggatcagccctcacagacaagcac
tcagataaaagttag
DBGET
integrated database retrieval system
