KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100411511
Entry
100411511         CDS       T03264                                 
Symbol
POLR2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9 isoform X2
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03020  RNA polymerase
cjc03420  Nucleotide excision repair
cjc05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100411511 (POLR2I)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100411511 (POLR2I)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100411511 (POLR2I)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjc03021]
    100411511 (POLR2I)
   03400 DNA repair and recombination proteins [BR:cjc03400]
    100411511 (POLR2I)
Transcription machinery [BR:cjc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100411511 (POLR2I)
DNA repair and recombination proteins [BR:cjc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100411511 (POLR2I)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Zn_ribbon_recom Ogr_Delta Zn_ribbon_GRF_2 HVO_0758 TtuA_LIM_N Zn_ribbon_NrdR
Other DBs
NCBI-GeneID: 100411511
NCBI-ProteinID: XP_002762104
Ensembl: ENSCJAG00000009671
UniProt: F7IC64
LinkDB
Position
22:complement(30799167..30800491)
AA seq 125 aa
MEPDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggagcccgacgggacctacgagccgggcttcgtgggtattcgcttttgccaggaatgt
aacaacatgctataccccaaggaagacaaggagaaccgcattctgctctacgcgtgccgg
aactgtgattaccagcaggaggccgacaacagctgcatctatgtcaacaagatcacgcac
gaagtggacgaactgacccagattatcgccgacgtgtcccaggaccccacgttgccgcgg
accgaggaccacccgtgccagaagtgtggccacaaggaggctgtgttcttccagtcacac
agtgcccgggccgaggacgccatgcgtctgtactacgtgtgcacagccccacactgtggc
caccgctggaccgagtga

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