Callithrix jacchus (white-tufted-ear marmoset): 100411573
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Entry
100411573 CDS
T03264
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A3 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03040
Spliceosome
cjc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100411573
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100411573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100411573
03041 Spliceosome [BR:
cjc03041
]
100411573
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100411573
mRNA cycle factors
Common to processing body (P body) and stress granule
100411573
Spliceosome [BR:
cjc03041
]
Common components
Common spliceosomal components
hnRNP proteins
100411573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
100411573
NCBI-ProteinID:
XP_002756261
Ensembl:
ENSCJAG00000023383
LinkDB
All DBs
Position
12:complement(52672881..52674197)
Genome browser
AA seq
304 aa
AA seq
DB search
MEVKPPPGRPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGT
LTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPG
AHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTV
DKIVVQKYHTINGHNCEVKKALSKQEMQSAGSRRGRGGGSGNFMGRGGNFGGGGGNFGRG
GNFGGRGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYGGGYGSGGGSGGYG
SRRF
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaaaccgccgcccggtcgcccccagcccgactccggccgtcgccgtcgccgc
cgcggggaggagggccatgatccaaaggaaccagagcagttgagaaaactgtttattggt
ggtctgagctttgaaactacagatgatagtttaagagaacattttgagaaatggggcaca
cttacagattgtgtggtaatgagagatccccaaaccaaacgttccaggggctttggtttt
gtgacttattcttgtgttgaagaggtggatgcagcaatgtgtgctcgaccacacaaggtt
gatgggcgtgtagtggaaccaaagagagctgtttctagagaggattctgtaaagcctggt
gcccatctaacagtgaagaaaatttttgttggtggtattaaagaagatacggaagagtat
aatttgagagactactttgaaaagtatggcaagattgaaaccatagaagttatggaagac
aggcagagtggaaaaaagagaggatttgcttttgtaactttcgatgatcatgatacagtt
gataaaattgttgttcagaaataccacactattaatgggcataattgtgaagtgaaaaag
gccctttctaaacaagagatgcagtctgctggatcacggagaggtcgtggaggtggatct
ggcaattttatgggtcgcggaggaaactttggaggtggtggaggtaattttggccgtggt
ggaaactttggtggaagaggtaactatggtggtggtgggaactataatgattttggaaat
tatagtggacaacagcaatcaaattatggacccatgaaagggggcagttttggtggaaga
agctcgggcagtccctatggtggtggttatggatctggtggtggaagtggtggatatggt
agcagaaggttctaa
DBGET
integrated database retrieval system
