Callithrix jacchus (white-tufted-ear marmoset): 100411678
Help
Entry
100411678 CDS
T03264
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04066
HIF-1 signaling pathway
cjc04137
Mitophagy - animal
cjc04140
Autophagy - animal
cjc04148
Efferocytosis
cjc04659
Th17 cell differentiation
cjc04919
Thyroid hormone signaling pathway
cjc05167
Kaposi sarcoma-associated herpesvirus infection
cjc05200
Pathways in cancer
cjc05205
Proteoglycans in cancer
cjc05208
Chemical carcinogenesis - reactive oxygen species
cjc05211
Renal cell carcinoma
cjc05230
Central carbon metabolism in cancer
cjc05231
Choline metabolism in cancer
cjc05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
100411678 (HIF1A)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100411678 (HIF1A)
04137 Mitophagy - animal
100411678 (HIF1A)
04148 Efferocytosis
100411678 (HIF1A)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100411678 (HIF1A)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100411678 (HIF1A)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100411678 (HIF1A)
05205 Proteoglycans in cancer
100411678 (HIF1A)
05208 Chemical carcinogenesis - reactive oxygen species
100411678 (HIF1A)
05230 Central carbon metabolism in cancer
100411678 (HIF1A)
05231 Choline metabolism in cancer
100411678 (HIF1A)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
100411678 (HIF1A)
09162 Cancer: specific types
05211 Renal cell carcinoma
100411678 (HIF1A)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
100411678 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100411678 (HIF1A)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100411678 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
100411678
NCBI-ProteinID:
XP_035116553
Ensembl:
ENSCJAG00000019202
UniProt:
A0A5K1VTG9
LinkDB
All DBs
Position
10:92292043..92349236
Genome browser
AA seq
827 aa
AA seq
DB search
MEGASGANDKKNRISSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASV
MRLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY
MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRG
RTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTEC
VLKPVESSDMKMTQLFTKVESEDTSSLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTE
TDDQQLEEVPLYNDVMLPSSNEKLQNINLSMSPLATSETPKPLRSSADPALNQEVALKLE
PNPESLELSFTMPQIQDQPPSPSDGSTRQSSPEPNSPSEYCFYVDSDMVNEFKLELVEKL
FAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSASPESASPQSTV
TVFQQTQIQELTSNATTTTATTDELKTVTKDRMEDIKILIASPSPTHIHKETTSATSSPY
RDTQSRTASPNRAGKGVIEQTEKSHPRSPNVLSVALSQRATVPEEELNPKILALQNAQRK
RKIEHDGSLFQAVGIGTLLQQPDDHATTTSLSWKRVKGCKSSEQNGMEQKTIILIPSDLA
CRLLGQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccagcggcgcgaacgacaagaaaaataggataagttctgaacgtcgaaaa
gaaaagtctcgagatgcagccagatctcggcgaagtaaagaatctgaagttttttatgag
cttgctcatcagttgccacttccacataatgtgagctcacatcttgataaggcttctgtt
atgagacttaccatcagctatttgcgtgtgaggaaacttctggatgctggtgatttggat
attgaagatgaaatgaaagcacaaatgaattgcttttatttgaaagccttggatggtttt
gttatggttctcacagatgatggtgacatgatttacatttctgataatgtgaacaaatac
atgggattaactcagtttgaactcactggacacagtgtgtttgattttactcatccatgt
gaccatgaggaaatgagagaaatgcttacacacagaaatggccctgtgaaaaagggtaaa
gaacaaaacacacagcgaagcttttttctcagaatgaagtgtaccttaactagccgaggg
agaactatgaacataaagtctgcaacatggaaggtattacactgcacaggccatattcat
gtatatgataccaacagtaaccaacctcagtgtgggtataagaaaccacctatgacctgt
ttggtgctgatttgcgaacccattcctcacccatcaaatattgaaattcctttagatagc
aagacttttctcagtcgacacagcctggatatgaaattttcttactgtgatgaaagaatt
actgaattgatgggatatgagccagaagaacttttaggccgctcaatttacgaatattat
catgctttagactctgatcatctgaccaaaacgcatcatgatatgtttactaaaggacaa
gtcaccacaggacagtacaggatgcttgccaaaagaggtggatatgtctgggttgaaact
caagcaactgtcatatataacaccaagaactctcaaccacagtgcattgtgtgtgtaaat
tatgttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgt
gtccttaaaccggttgaatcttcagatatgaaaatgactcagctattcaccaaagttgaa
tcagaagatacaagtagcctctttgataaacttaagaaggaacctgatgctttaactttg
ctggccccagctgctggagacacaatcatatctttagattttggcagcaatgacacagaa
actgatgaccagcaacttgaggaagtaccattgtataatgatgtaatgctcccctcatcc
aatgaaaaattacagaacataaatttgtcaatgtctccattagccacctctgaaactcca
aagccacttcgaagtagtgctgaccctgcactgaatcaagaagttgcattaaaattagaa
ccaaatccagagtcactggaactttcttttaccatgccccagattcaagatcagccaccc
agtccttctgatggaagcactagacaaagttcacctgagcctaacagtcccagtgaatat
tgtttttatgtggacagtgatatggtcaatgaattcaagttggaattggtagaaaaactt
tttgctgaagacacagaagcgaagaacccattttctactcaggacaccgatttagacttg
gagatgttagctccctatatcccaatggatgatgactttcagttacgttccttcgatcag
ttgtcaccgttagaaagcagttctgcaagccctgaaagcgcaagccctcagagcacagtt
acagtattccagcagactcagatacaagaacttacttctaatgccaccactaccactgcc
accactgatgaattaaaaacagtgacaaaagaccgtatggaagacattaaaatattgatt
gcatctccatctcctacccacatacataaagaaactactagtgccacatcatcaccatat
agagatactcaaagtcggacagcctcaccaaacagagcaggaaaaggagtcatagaacag
acagaaaagtctcatccaagaagccctaacgtgttatctgtcgctttgagtcaaagagct
acagttcctgaggaagaactaaatccaaagatactagctttgcagaatgctcagagaaag
cgaaaaattgaacatgatggttcactttttcaagcagtaggaattggaacattattacag
cagccagacgatcatgcaactactacatcactttcttggaaacgtgtaaaaggatgcaaa
tctagtgaacagaatggaatggagcaaaagacaattattttaataccctctgatttagca
tgtagactgctggggcaatcaatggatgaaagtggattaccacagctgaccagttatgat
tgtgaagttaatgctcctatacaaggtagcagaaacctactgcagggtgaagaattactc
agagctttggatcaagttaactga
DBGET
integrated database retrieval system
