Callithrix jacchus (white-tufted-ear marmoset): 100411812
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Entry
100411812 CDS
T03264
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04140
Autophagy - animal
cjc04148
Efferocytosis
cjc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100411812 (VPS18)
04148 Efferocytosis
100411812 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100411812 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100411812 (VPS18)
Membrane trafficking [BR:
cjc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100411812 (VPS18)
Hops complex
100411812 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
100411812
NCBI-ProteinID:
XP_009003786
Ensembl:
ENSCJAG00000020789
UniProt:
F7IT14
LinkDB
All DBs
Position
10:complement(41443969..41452870)
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AA seq
973 aa
AA seq
DB search
MASILDEYENSLSRSTVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPTERITSL
IISSNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKLFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRATEGAE
AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLSREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALVEFLQRKLASL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRAFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWMELGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCAELPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKETEGGAATGGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYKEEQLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgagtacgagaactcgctgtcccgatcgaccgtcttgcagcca
ggctgccctagcgtgggcatcccccactcggggtatgtgaatgcccagctggagaaggaa
gtgcccatcttcacaaagcagcgcattgacttcacccctacggagcgtatcaccagtctt
atcatctccagcaatcagctctgcatgagcctgggcaaggataccctgctccgcattgac
ctgggcaaggcaaatgagcccaaccacgtggagctgggacgtaaggatgacgcaaaggtt
cacaagttgttccttgaccatactggctctcacctgctgattgctctgagtagcacagag
gtcctctacgtgaaccgaaacggacagaaggtacggccactagcacgctggaaggggcaa
ctggtggagagtgtgggttggaacaaggcactgggcactgagagcagcacaggccccatc
ctggtcgggactgctcaaggccagatcttcgaagcagagctctcagccagcgaaggtggg
cttttcggccctgctccagatctctacttccgcccattgtacgtgctaaatgaagaaggg
ggtccagcgcctgtgtgctcccttgaagccgagcggggccctgatgggcgtagctttgtt
attgccaccactcgacagcgcctcttccaatttataggccgagcaacagagggggctgag
gcccagggtttctcagggctctttgctgcttacacggaccacccaccgccattccgtgag
ttccccagcaacctgggctacagtgagttggccttctacacgcccaagctgcgctctgca
ccccgggcctttgcctggatgatgggggatggcgtattgtatggggcattggactgtggg
cgccctgactctctgctgagcgaggagcgagtctgggaatacccagagggggtagggcct
ggggccagcccacccctagccatcgtcttgacccagttccacttcctgctgctgctggca
gacagggtggaggcagtgtgcacactgactgggcaggtggtgctgcgggatcacttcctg
gagaagtttgggccgctgaagcacatggtgaaggactcctccacaggccagctgtgggcc
tacactgagcgggctgtcttccgctaccatgtgcagcgggaggcccgggatgtctggcgc
acctacctggacatgaaccgctttgatctggccaaagagtattgtcgagagcggcccgac
tgcctggacacagtcctgtcccgggaggctgatttctgctttcgccagcgtcgctacctg
gagagcgcccgctgctacgccctgacccagagctactttgaggagattgccctcaagttc
ttggaggcccgacaggaggaggctctggttgagtttctccagcgaaaactggccagtttg
aagccagccgagcgtacccaggccacactgctgaccacctggctgacagagctctacctg
agccggcttggggctctgcagggtgacccagaggccctgaccctctaccgagaaaccaag
gaatgctttcgtgccttcctcagcagcccccgccacaaagagtggctctttgctagccgg
gcctctatccatgagctgctcgccagtcatggtgacacagagcacatggtgtactttgct
gtgatcatgcaggactacgaacgcgtggtggcttaccactgtcagcacgaagcctatgag
gaggccctggccgtgctcgcccgccaccgcgacccccagctcttctacaagttttcgccc
atccttatccgtcacataccccgccagctggtagatgcctggatggagctgggcagccgg
ctggatgcccggcagctcatccctgccctggtgaactacagtcagggtggtgaggtccag
caggtgagccaagccatccgctacatggagttctgcgtgaacgtgctgggggagactgag
caggccatccacaactacctgctgtcgctgtacgcccgtggccggccagactcactgctg
gcctacctcgagcaggccggggccagcccacaccgggtgcattacgacctcaagtatgca
ctccggctctgtgccgagcatggccaccaccgtgcttgtgtccacgtctacaaggtcctg
gagctgtatgaggaggctgtggatctggccctgcaggtggatgtggacctggccaagcag
tgtgcagagctgcccgaggaggatgaggaattgcgcaagaagctgtggctgaagatcgca
cggcacgtggtgcaggaggaggaggatgtgcagacagccatggcttgcctggctagctgc
cccctgctcaagattgaggatgtgctgcccttctttcctgatttcgttaccatcgaccac
ttcaaggaggcaatctgcagctcacttaaggcctacaaccatcacatccaggagctgcag
cgggagatggaagaggccacagccagtgcccagcgcatccggcgagacctgcaggagctg
cggggccgctatggcactgtggagccccaggacaagtgtgccacttgcgacttccccctg
ctcaaccgccctttttacctcttcctctgtggccacatgttccatgctgactgcctgctg
caggccgtgcgacctggcctgccggcctacaagcaggcccggctggaggagctgcagagg
aagctgggggctgctccacccccagctaaggggtctgcccgggccaaagagaccgagggt
ggggctgccaccgggggccccagccgggaacagctcaaggctgacctggatgagctggtg
gccgctgagtgtgtgtactgtggggagctgatgatccgctctatcgaccggcccttcatt
gacccccagcgctacaaggaggagcagctcagttggctgtag
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integrated database retrieval system
