Callithrix jacchus (white-tufted-ear marmoset): 100411833
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Entry
100411833 CDS
T03264
Symbol
LAMP1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1 isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03272
Virion - Hepatitis viruses
cjc03273
Virion - Lassa virus and SFTS virus
cjc04140
Autophagy - animal
cjc04142
Lysosome
cjc04145
Phagosome
cjc05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
100411833 (LAMP1)
03272 Virion - Hepatitis viruses
100411833 (LAMP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100411833 (LAMP1)
04142 Lysosome
100411833 (LAMP1)
04140 Autophagy - animal
100411833 (LAMP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
100411833 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100411833 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjc04147
]
100411833 (LAMP1)
04090 CD molecules [BR:
cjc04090
]
100411833 (LAMP1)
Membrane trafficking [BR:
cjc04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
100411833 (LAMP1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
100411833 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
100411833 (LAMP1)
Exosome [BR:
cjc04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
100411833 (LAMP1)
CD molecules [BR:
cjc04090
]
Proteins
100411833 (LAMP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Motif
Other DBs
NCBI-GeneID:
100411833
NCBI-ProteinID:
XP_035150562
Ensembl:
ENSCJAG00000006900
UniProt:
U3D4R1
LinkDB
All DBs
Position
1:28084758..28108377
Genome browser
AA seq
411 aa
AA seq
DB search
MAAPGSARRPLLLLLLGLLHCASSVFVVKNSNGTACIMANFSAAFSVNYDSRSGSKNVTF
DLPSDAEMLNSSSCGKENTSDPSLVIGFGKEHMLTLKFTRNATRYSVQLMSFVYNLSDTH
LFPNASSNETKTVESITDIRADIDKKYRCVSGTQVHMSNVTVTLRDATIQAYLSNSSFSR
GETRCEQDGPSPTTAPPAPPSPSPSPMPESPSVNKYSVNGTNGTCLLASMGLQLNLTYER
KDNTTVTKLLNINPNKTLATGSCGTHLVTLELRDEGGTVLLFQFGMNASSSRFFLQGIQL
NTTLPDARDPTFKASNNSLRALQATVGNSYRCNAEERVRVTKALSVNIFKVWVQAFKVDG
DQFGSVEECLLDENNMLIPIAVGGALAGLVLIVLIAYLVGRKRSHAGYQTI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccggcagcgcccggcggcccctgctgctgctgctgctcggcctcctgcat
tgtgcgtcgtcagtgtttgtggtgaagaatagcaacggcactgcctgcataatggccaac
ttctctgctgccttctcagtgaactacgactccaggagtggctctaagaatgtgaccttt
gacctgccttcagatgcagaaatgctcaacagtagctcctgtggaaaagagaacacttct
gaccccagtctcgtgattggttttggaaaagaacatatgctaaccctcaagttcacgaga
aatgcaacacgttacagtgtccagctgatgagttttgtttataacttgtcagacacgcac
cttttccccaatgcaagctccaatgaaaccaagactgtggaatctataacggacatcagg
gcagatatagataaaaaatacagatgtgttagtggcacccaggtccacatgagcaacgtg
accgtcacgctccgagatgccaccatccaggcgtacctttccaacagcagtttcagcagg
ggagagacgcgctgtgaacaagacgggccttccccgaccacagcgccgcccgcaccaccc
agcccctcgccctcacccatgccggagagcccctctgtgaacaagtacagtgtgaacggc
accaacgggacctgcctactggccagcatggggctgcagctgaacctcacctacgagagg
aaggacaacacgacggtgacaaaacttctcaacatcaaccccaacaagaccttggccacc
gggagctgtggcacccacctggtgaccctggagctgcgcgatgagggtggcacggtcctg
ctgttccagtttgggatgaatgcaagttctagccgttttttcctacaaggaatccagttg
aatacaactcttcctgacgccagagaccccacatttaaagcctccaacaactccctgaga
gcgctgcaggccaccgttggcaactcctacaggtgcaacgccgaggagcgcgtccgcgtc
accaaggcgctttccgtcaacatattcaaagtctgggtccaggctttcaaggtggacggt
gaccagtttggctctgtggaggagtgtctgctggacgagaacaacatgctgatccccatc
gctgtgggcggcgccttggcggggctggtcctcatcgtcctcatcgcctacctcgttgga
aggaagaggagtcacgccggctaccagacgatctag
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