Callithrix jacchus (white-tufted-ear marmoset): 100412034
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Entry
100412034 CDS
T03264
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X9
KO
K26273
protein strawberry notch
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100412034 (SBNO1)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100412034 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
100412034
NCBI-ProteinID:
XP_002753181
Ensembl:
ENSCJAG00000016599
UniProt:
F6Y413
LinkDB
All DBs
Position
9:complement(122921903..123003424)
Genome browser
AA seq
1393 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDGGDAGLTTPTPTPSVQQSVPLSALELGLDTEAA
VPVKQEPETVPTPALLNVRQQPPSTTTFVLNQINQLPPLASTIVMTKTPPVTTNRQTITL
TKFIQTTASTRPSVSAPAVRNAMTSAPSKDQVQLKDLLKHNSLNELMKLKPPANIAQPVA
TAATDVSNGTVKKESSNKDVARMWINDMKMRSFSPTMKVPVVKDDDEPEEEDEEEMGHAE
TYAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITY
AAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAE
RDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQ
LLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGAS
EPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTG
VTFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRF
FKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGV
LQSLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPRDSPCKENKVKKRKGEEITREAKKAR
KVGGLTGSSSDDSGSESDASDNEESDYDSSKNMSSGDDDDFNPFRDESSEDDENDPWLIR
KDHKKNKEKKKKKSIDPDSIQSALLASGLGSKRPSFSSTPVISPAPNSTPANSNTNSNSS
LITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSN
DDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRR
VHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALT
HGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLI
GVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNSLFQYFADTLTAVVQNAKKNG
RYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTG
PDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSD
DALMHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEG
VLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQLWQ
QHHPQSITNLSNA
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaccagggcaagatttactgcttgctgctttgagtgagagtggaattagtccg
aatgacctctttgatattgatggtggagatgcagggctcacaactccaacaccaacccct
tcagttcagcagtcagtgccacttagtgcattagaactaggtttggacaccgaagcagca
gttcctgtaaaacaagaaccagagactgtacctactccagcactgttaaatgtgaggcag
cagcctccatctactacaacatttgtgctgaatcaaataaatcagcttccacccttggca
tctacaattgtaatgactaaaacaccacctgtaacaaccaacaggcaaaccatcacttta
actaagtttatccagactactgcaagcacacgcccttcagtctcagcaccagcagtacga
aatgccatgacttctgcaccttcaaaagaccaggttcaactgaaggatctactaaaacat
aatagtcttaatgaactcatgaaactaaagccacctgctaatattgctcagccagtagca
acagcagctactgatgtaagcaatggtacagtaaagaaagagtcttctaataaagatgta
gcaagaatgtggataaacgacatgaaaatgaggagtttttcgccaactatgaaggtccct
gttgtaaaagatgatgatgaaccagaggaagaagacgaggaagaaatgggtcatgcagaa
acctatgcagagtacatgccaataaagttaaaaattggcctacgtcacccagatgctgtt
gtggaaactagctctttatccagtgttactcctcctgatgtttggtacaaaacgtcaatt
tctgaggaaaccattgataatggctggttatcagcattacaacttgaggcaattacatat
gcagcccagcaacatgaaacttttctacctaatggagatcgtgctggcttcttaataggt
gatggtgctggtgtaggaaaaggaagaacgatagcaggaatcatctatgaaaattatttg
ttgagtaggaaacgagcattgtggtttagtgtttcaaatgacttaaaatatgatgctgaa
agagatttaagggatattggagcaaaaaacattttggttcattcattaaataagtttaaa
tatggaaaaatttcttccaaacataatgggagtgtgaaaaagggtgttatttttgctaca
tactcttcacttattggtgaaagccagtctggcggcaagtataaaactagattaaaacaa
cttctacattggtgtggtgatgactttgatggagtgatagtgtttgatgagtgtcataaa
gcaaaaaacttatgtcctgttggttcttcaaagccaaccaagacaggcttagctgtttta
gagcttcagaacaaattgccaaaagccagagttgtttatgctagtgcaactggtgcttct
gaaccacgcaacatggcctatatgaaccgtcttggcatatggggtgagggtactccattt
agagaattcagtgattttattcaagcagtagaacggagaggagttggtgccatggaaata
gttgctatggatatgaagctcagaggaatgtacattgctcgacagctgagctttactgga
gtgaccttcaaaattgaagaagttcttctttctcagagctatgttaaaatgtataacaaa
gcagtcaagctgtgggtcatcgccagagagcggtttcagcaagctgcagatctgattgat
gccgaacaacgaatgaagaagtccatgtggggtcagttctggtctgctcatcagaggttt
ttcaaatacttatgtatagcatccaaagttaaaagggttgtgcaactagctcgagaggaa
atcaagaatggaaaatgtgttgtgattggtctgcagtctacaggagaagctagaacatta
gaagctttggaagagggcgggggagaattgaatgattttgtttcaactgccaaaggtgtg
ttgcagtcactcattgaaaaacattttcctgctccagacaggaaaaaactttatagtttg
ctaggaatcgatttgacagctccaagtaacaacagttcaccaagagatagtccttgtaaa
gaaaataaagtaaagaagcggaaaggtgaagaaataactcgagaagccaaaaaagcgcga
aaagtaggtggacttactggtagcagttctgatgacagtggaagtgaatctgatgcctct
gataatgaagaaagtgactatgacagctctaaaaacatgagctctggagatgatgatgat
ttcaacccatttagagatgagtctagtgaggatgatgaaaatgatccctggttaatcaga
aaagatcacaagaaaaacaaagagaaaaaaaagaagaaaagtatagatccagattctatt
caaagtgccttattagcatcaggtcttggatcaaaacgacccagtttttcatctacacca
gttatctcacctgctcctaacagtacaccagctaacagtaacaccaacagtaacagtagc
cttataacaagtcaggatgccgtggaaagggctcaacagatgaagaaagacctgctagat
aaactagagaagttagctgaagacctcccccctaataccctggatgaacttatcgatgaa
cttggtggccctgagaatgttgctgagatgactggccgcaagggacgggttgtgagcaat
gatgatggaagcatatcttatgagtcaagatctgaacttgatgtgcctgtggaaatacta
aacatcacggaaaaacagcgatttatggatggagataagaatattgctatcatctcagaa
gctgccagctcgggtatttcattacaagcagataggagagctaaaaatcaaaggcgaaga
gttcatatgactttagaattaccttggagcgctgatagagcaattcagcaattcggacga
actcacagatcaaaccaagttactgctcctgaatatgtcttcctgatttctgaactggca
ggagaacaaagatttgcatctattgttgctaaaagacttgagagtttgggagcacttaca
catggtgatagaagagcaacagaatctagggatctgagcaggttcaactttgacaataag
tatggaagaaatgctttagaaattgtcatgaaatccattgtgaacttggattcgcctatg
gtatcaccacctccagactatcccggagaattttttaaagatgttcgacaaggactgata
ggagttggtctgataaatgtagaagatcgctcgggaattcttactctcgataaagattat
aacaacataggaaaattcttaaatagaattttaggcatggaggtacatcagcagaattca
ttgtttcagtattttgcggacacgcttactgcagttgtccaaaatgccaaaaaaaatgga
agatacgatatgggaatcttagatcttggttctggagatgaaaaggtgaggaaaagtgat
gttaaaaagtttctgactccaggatattcaacctcgggccatgtagaattatacacaatt
agtgtagagaggggaatgtcatgggaagaagctactaagatttgggccgaactgacagga
ccagacgatggcttttacttgtcattgcaaataagaaacaacaagaaaactgctatctta
gttaaagaagtgaaccctaaaaagaaacttttcttagtttatcgaccaaatactgggaaa
cagctcaaattagaaatttatgctgatctaaaaaagaaatacaagaaggttgtctcagat
gatgccctgatgcactggttagatcagtataattcatctgcagatacttgtactcatgct
tattggcgtggcaattgcaaaaaagcaagcttggggttagtttgtgaaataggtcttcgt
tgccgtacatattatgtattatgtggttcagtgctgagtgtctggacaaaagttgagggt
gttctagcatctgtcagtggcacaaacgtgaaaatgcagatcgtccggctaagaacggaa
gatgggcaacggatagtaggtttgatcattccggcaaattgtgtgtctcctcttgtaaac
ctcctatcaacttcagaccagtctcaacagcttgcagtccaacagaagcagctatggcaa
cagcatcaccctcagagcatcaccaacttgagcaacgcgtaa
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