KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100412118
Entry
100412118         CDS       T03264                                 
Symbol
ELL
Name
(RefSeq) RNA polymerase II elongation factor ELL isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100412118 (ELL)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cjc01009]
    100412118 (ELL)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjc03021]
    100412118 (ELL)
Protein phosphatases and associated proteins [BR:cjc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100412118 (ELL)
Transcription machinery [BR:cjc03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     100412118 (ELL)
    Little elongation complex (LEC)
     100412118 (ELL)
SSDB
Motif
Pfam: ELL Occludin_ELL DUF3450 DUF6185 RNA12 RNase_Y_N EzrA TMF_TATA_bd
Other DBs
NCBI-GeneID: 100412118
NCBI-ProteinID: XP_035142290
Ensembl: ENSCJAG00000015279
LinkDB
Position
22:complement(16810524..16880431)
AA seq 650 aa
MAALKEARSYGLSCGRVSDGSRVSVFHVKLTDSALRAFESYSARQNLPCVSEKVVLQCSE
STKTTPVSLRAVWKDSVSLRPSIRFQGSQGHISIPQPDCPEEARTFSFYLSNIGRDSPQG
SFDCIQQYVSSHGDVHLDCLGSIQDKITVCATDESYQKARQSMAQAEEETRSRSAIVIKP
GGRYLGKKVQFRKPAPGATDAVPSRKRATPINLASAIRKSGTSVVSGGSGVSQRPFRDRV
LHLLALRPYRKAELLLRLQKDGLTQADKDALDGLLQQVANMSAKDGTCTLRDCMYKDVQK
DWPGYSEGDQQLLKRVLVRKLCQPQSTGSLLGDAAASSPPGERGRSASPPQKRPQPPDFI
DPLANKKPRISHFTQRAQPAVNGKLGMPNGREALLPTPGPPASTDTLSSSTHLPPRLEPP
RAHDPLADVSNDLGHSGRDCERGEAAAPAPTARLGLPLLTDCAQPSRPHGSPSRSKPKKK
SKKHKDKERAAEDRPRAQPPDCAPATHTTLGAPADAPGLNGTCSVSSVPTSTSETPDYLL
KYAAISSSEQRQSYKNDFNAEYSEYRDLHARIERITRRFTQLDAQLRQLTQGSEEYETTR
GQILQEYRKIKKTNTNYSQEKHRCEYLHSKLAHIKRLIAEYDQRQLQAWP
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggcggcgttgaaggaggctaggagctatgggctgtcgtgcgggcgggttagcgacggc
agcagggtgtcagtgttccacgtgaagctcaccgacagtgccctgagggccttcgagagc
tacagcgcaagacagaacttgccgtgtgtgtcggagaaggttgtgctccagtgctctgag
tcaacaaagacgacccctgtgagcttgagggcagtttggaaggattctgtttcactgagg
ccatcgatccgatttcaaggaagtcaagggcacatctccatcccccagcctgactgtccc
gaggaggcacggacattctccttctacctctccaacatcggccgcgacagcccccagggc
agcttcgactgcatccagcagtatgtctccagtcatggggacgtccacctggactgcctg
ggcagcatccaggacaagatcacggtgtgcgccactgacgaatcctaccagaaggcgcgg
cagagcatggcccaggcagaggaggagactcggagccgcagtgctattgtcatcaagcct
ggaggccgctacctgggtaagaaggttcagtttcggaaaccagccccaggcgcaacagac
gctgtgccctcccggaaacgggcaacccccatcaacttggcgagtgccatcaggaagagt
ggtaccagtgtcgtgagcgggggcagcggggtgtcccagaggcccttccgtgaccgagtg
ctgcacctcctggcactaaggccctaccgcaaggctgagctactgttgcggctgcagaag
gatggcctgacgcaggcggacaaggatgcgctggatggcctcctccagcaggtggccaac
atgagtgctaaggacggcacgtgcacgttgcgggactgcatgtacaaggatgtgcagaag
gactggcccggctactcagagggggaccagcagctgctgaagcgggtgcttgtccggaag
ctgtgccagccacagagcaccggcagcctccttggagatgctgctgcctctagcccccca
ggcgagcgtgggcgctctgcctcacccccgcagaaacggccacagcctcctgatttcatc
gaccccctagccaacaagaaaccccggatatcacacttcactcagagagctcagccagct
gtcaacgggaagctgggtatgcccaacggccgtgaggccctgctgcccaccccgggcccg
ccagccagcacagacaccctcagctccagcacccacctgcccccgcgactggagcccccg
agggcccatgaccccctggctgatgtcagcaatgacctgggccacagtggccgggactgt
gagcgcggggaggcggctgccccagcccccactgcacgccttggtctgcccctgctgacg
gactgtgcccagcccagcaggccccatggcagtccctcacgcagcaagcccaagaagaag
tccaagaagcacaaagacaaggagagggcggctgaggacaggccccgggcccagccccca
gactgtgcacccgctacacacaccaccctcggagccccagcagatgccccaggtttgaac
ggaacctgcagcgtttccagtgttcccacgtccacgtcggagacgcccgactacttgctg
aaatacgcagccatctcttcttcggagcagcgccagagctacaagaatgacttcaatgcg
gagtacagcgagtaccgcgacctgcacgcccgcatcgagcgcatcacgcggcggttcaca
caactcgacgcccagctccggcagctcacccagggctccgaggagtacgagactactcga
gggcagattttgcaggaatatcgaaaaatcaaaaagactaacaccaactacagccaggag
aagcaccgctgcgagtacctgcacagcaagctggcccacatcaagaggctcatcgccgag
tacgaccagcggcaactgcaggcctggccctag

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