Callithrix jacchus (white-tufted-ear marmoset): 100412220
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Entry
100412220 CDS
T03264
Symbol
MSX1
Name
(RefSeq) homeobox protein MSX-1
KO
K09341
homeobox protein MSX
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05166
Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
100412220 (MSX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100412220 (MSX1)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
100412220 (MSX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
100412220
NCBI-ProteinID:
XP_035149970
UniProt:
Q2VL84
U3C0T9
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All DBs
Position
3:181272914..181277081
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AA seq
303 aa
AA seq
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MAPSADMTSLPLGVKVEDSAFGKPAGGGSGQAPGAAAATAAAMGADEEGAKPKVSPSLLP
FSVEALMADHRKPGAKESSLAASESAQAAGGLAQPLGVPPGSLGAPDAPSSPRPLGHFSV
GGLLKLPEDALVKAESPEKPERTPWMQSPRFSPPPARRLSPPACTLRKHKTNRKPRTPFT
TAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEAELEKLKM
AAKPMLPPAAFGLSFPLGGPAAVAAAAGASLYGASGPFQRAALPVAPVGLYTAHVGYSMY
HLT
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggccccgagtgctgacatgacttctttgccactcggtgtcaaagtggaggactccgcc
ttcggcaagccggcggggggaggctcgggccaggcccccggcgccgccgcggccacggcg
gccgccatgggcgcggacgaggagggagccaagcccaaagtgtccccttcgctcctgcct
ttcagcgtggaggcgctcatggccgaccacaggaagccaggggccaaggagagctcccta
gcggcctccgagagcgcgcaggcggcgggtggcttggctcagcccttgggcgtcccgccc
gggtcgctgggcgccccggacgctccttcttcgccgcggccgctcggccatttctcggtg
ggaggactccttaagctgccagaagatgcgctcgtcaaagccgagagccccgagaagccc
gagaggactccgtggatgcagagtccccgattctccccgccgccagccaggcggctgagc
cccccagcctgcaccctgcgcaaacacaagacaaaccgtaagccacggacgccctttacc
accgcgcagctgctggccctggagcgcaagttccggcagaagcagtacctgtccatcgcc
gagcgcgcggagttctccagctcgctcagcctcaccgagacgcaggtgaagatctggttc
cagaaccgccgcgccaaggcaaagagactacaagaggcggagctggagaagctgaagatg
gccgccaagcccatgctgccaccggcagccttcggcctctccttccctctcggcggcccc
gcagctgtagctgccgcagcgggtgcctccctctacggcgcctctggccccttccagcgc
gccgcgctgcccgtggcgcccgtgggactctacacggcccatgtgggctacagcatgtac
cacctgacatag
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