Callithrix jacchus (white-tufted-ear marmoset): 100412403
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Entry
100412403 CDS
T03264
Symbol
SRCAP
Name
(RefSeq) helicase SRCAP isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100412403 (SRCAP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjc03036
]
100412403 (SRCAP)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
100412403 (SRCAP)
SWR1 complex
100412403 (SRCAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
100412403
NCBI-ProteinID:
XP_017834355
Ensembl:
ENSCJAG00000002760
UniProt:
U3CNY4
LinkDB
All DBs
Position
12:28026569..28069100
Genome browser
AA seq
3220 aa
AA seq
DB search
MQSSPTPARPQFPVLQTQMVSDGMTGSNPVSPASSSSPASSGAGGISPQHIAQDSSLDGP
PGPPDGATVPLEGFNLPQAADLANKGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS
LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE
ERARREEQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT
EKYSDLLSQSLNQPLSSSKAGSSPCLGSSSAASSPPPPASRLDDEDGDFQPQEEEEEDDE
ETIEVEEQQEGNDAEAQRREIELLRREGELPLEELLRSLPPQLLGGASSPSRTPSSHDSD
TRDGPEEGAEEDPSQVLEVKAPPSALTQCNKRPWHPDEDDEEFTANEDEAEDEEDTIAAE
EQLEGEVDHAMELSELAREGELSMEELLQQYAGAYAPGSGSSDDEDEDEVDANISDCEPE
GTVDAEEVPQEDSSSQSDSAEDQSEDEEDEHSEEEEESGSSASEESESEESEDAQSQSQA
DEEEEDDDFGVEYLLARDEEQSEADAGSGPPTPGPTTTLGPKKEITDIAAAAESLQPKGY
TLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAH
LACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKPNAFH
VCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQ
NSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLR
RVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVINILMQLRK
VCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRFDLIGLEGRVSRYE
ADTFLPRHRLSRRVLLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGRTVVVVNNPRTPL
GPVPVRPPPGPELSAQPTPGPTPPVLPAPLMVSASPTGPPLIPASRPPGPVLLPPLQPNS
GSLPQVLPSPLGVLSGTSRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVPPGYTF
PPAAATTTSTTTATATTTAVPTPTPAPQRLILSPDMQARLPSGEVVSIGQLASLAQRPVA
NAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLISQPAHVAL
IQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKIVVRQAPRD
GLTPVPPLAPAPRPPSSGLPAVLTPRPTLTPGRLPTPSLGTARTPMPTPTLVRPLLKLVH
SPSPEISASTPGAAPLTISSPLHVPSSLPVPASSPMPVPNSSPLASPVSSTVSVPVSSSL
PISVPTTHPAPASAPLTIPMSTPLPVSASGPALLTNVTPPLAPVVPAAPGPPSLAPAGAS
PSASALTLGLATAPSLSSSQTPGHSLLLAPTSSHVPGLNSAVPPACSPVLVPASALANPF
PAAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAILAPPAPPLAPLPVLAPSPGPAP
VLASSQTSVPVMAPSSTPGNPLASASPVPAPTPVLAPSSTQTMLPAPVPSPLPSPASTQT
LALPPALAPTLGGSSLSQTLSVGTGNSQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPL
GPTQTLSLAPASPMGPTPAHTLTLAPASSTASLLAPASVQTLTLSPAPIPTLGPAAAQTL
ALAPASTQSPASQASSLVVSASGATPLPVTMVSRLPVSKDEPDTLTLRSGPPSPPSTATS
FGGPRPRRQLPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSEAHGALAPVYGAEVLDFC
TLPQPVASPIGPRSPGPSHPTFWTYTEAAHRAVLFPQQRLDQLSEIIERFIFVMPPVEAP
PPSLHACHPPPWLAPRQAAFHEQLASELWPRARPLHRIVCNMRTQFPDLRLIQYDCGKLQ
TLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFN
ADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRL
ISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLEEPSSSSVPSVP
EEEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDGFPAGEGEEAS
RPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVEAARKDL
DQAKEEVFRLPQEEEEGLGAGDESSCGTGGGSHRRSKKAKAPERPGTRVSERLRGARAET
QGANYTPIISAHQTRSTTTLPRCSPARERVPRPAPRPRPTPASAPAAIPAPVPVPVSVPL
PISAPNPITILPVHILPSPPPPPQIPPCSPACTPPPACTPPPAHTPPPAQTSLLTPFPLL
VGPPSVPISPPVTSLPLGLRPEAELCAQALASPESLELATVASSETSSLTLVPPKDLLPV
AVEILPVSEKNLSLAPSASSPTLEAGNVPNGQEQEAPDSAEGTTVTVHPEGEELPVCVSE
SNGLELLPSAASHEPLQEPLEADRNSEELAEAQTPTFSPEKPQELVTAEVTAPSTSSSAT
SSPEGSSPARPPRRRTSADVEIRGQGTGRPGQPPGPKVLRKLPGRLVTVVEEKELVRRRR
QQRGAASTLVSGVSETSASPGSPSVRSMSGPESSPPTSGPCEAAPSSSLPTPPQQPFIAR
RHIELGVTGGGTPENGDGALLAITPPAVKRRRGRPPKNRSPADAGRGVDEAPSFTLKGKT
NGADPVPGAGTLIIGEPVLEPQLIPGPQPLGSQSVHRPNPILSPVEKRRRGRPPKARDLP
IPGIISSPGDGNSESRTQPPPLPPPLTPLPPLLACPSATVANTVTTVNISASPPKRKRGR
PPKNPPSPRPSQLPVLDRDSTSVLESCGLGRRRQPQGQGESEGSSSDEDGSRPLTRLARL
RLEAEGIRGRKSGGSMVVAVIQDDLDLVDSGPGGLELTPPVVSAPKLRSTRLRPGSLVTP
LETEKVPRKRAGAPVGGGPGPAKRGRLQPPSPLGPEGSVEESEPEPSGEEEEGDGTPHRR
PGPRRLVGTTNQGDQRILRSSAPPSLAGPAVSHRGRKAKT
NT seq
9663 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagccccacccctgctcgccctcagttcccagtcctacagacacagatggtg
tcggacggcatgacaggcagcaatcctgtgtcccctgcctcatccagttccccagcctct
agtggggcaggtggcatctccccccagcacatagctcaagattcttctctggatggacct
ccaggccccccagatggtgcaacagtgcccctggaggggttcaacttaccccaggctgct
gacctggctaacaagggcccaaagtgggagaaaagccatgccgaaatcgcagaacaggcc
aagcatgaggccgagattgagactcggattgctgagctgcggaaggagggtttctggtca
ctgaagaggctgcctaaggtgccagagccccctcgccccaaaggtcactgggactatctg
tgtgaagagatgcagtggctctctgctgactttgctcaggagcgccgttggaaacggggt
gtagcacgtaaggtggtacgcatggtgatccggcaccacgaagagcagcggcagaaagag
gaacgggcccggagggaggagcaggccaagctgcgtcgaatcgcttccactatggccaag
gatgtcaggcagttctggagcaatgtggagaaggtggtgcaattcaaacaacagtctcgg
cttgaggaaaagcgcaaaaaagccctggacctgcatttggacttcattgtggggcaaact
gaaaagtactcggaccttctgtctcagagcctcaaccagccattatcctccagcaaagca
ggctcttccccttgccttggctcttcctcagctgcctccagtcctccaccccctgcttcc
cgcctggatgatgaagatggggactttcaaccccaagaggaggaggaagaggatgatgag
gaaacgattgaggttgaagaacaacaggaaggcaatgatgcagaggcccagaggcgtgag
attgagctgcttcgccgtgagggagaactgccactggaagagctgctccgttcccttccc
cctcagctgctgggaggggcttccagcccctctcgaaccccctcatctcatgatagtgac
acccgagatgggcccgaagaaggtgctgaagaagatccctctcaggtgttggaggtaaag
gctccaccctctgctctcacacagtgcaacaaacgtccttggcatccagatgaagatgat
gaagagtttactgccaatgaggatgaagcggaggatgaagaggacacaatagcagctgag
gaacagttggaaggggaagtggatcatgccatggaactgagtgaattggctcgagaaggt
gagctttccatggaggaactattacagcagtatgcaggagcctatgccccaggctctggg
agcagtgatgatgaggatgaagatgaagttgatgctaatatctctgactgtgaaccagag
gggaccgtggacgcggaagaggttcctcaagaggatagtagcagtcagtcagactccgca
gaggaccagagtgaggatgaggaagatgagcattcagaggaggaagaagaaagtggaagt
tcagcatcagaggaatctgaatctgaagagtctgaggatgcccagtcacagagccaagca
gatgaagaggaggaagatgatgattttggggtagagtacttgcttgccagggatgaagag
cagagtgaggcagatgcaggcagtgggcctcccactccagggcccaccactactctaggt
ccaaagaaagaaattactgacattgctgcagcagcggaaagtctccagcccaagggttac
accctggccactacccaggtaaagacacccatccccctgcttttgcggggccaactccgg
gagtaccagcacattggactagactggctggttaccatgtatgagaagaagcttaatggc
attcttgctgatgagatggggcttgggaagaccatccagactatctccctgcttgcccac
ttggcttgtgagaaaggtaactggggtccccatttaatcattgttcccaccagcgtgatg
ttgaactgggagatggagttgaaacgttggtgccccagctttaaaatcctcacttactat
ggagcccagaaagagaggaagctcaagcggcagggctggaccaagcccaatgccttccat
gtgtgtatcacgtcttacaagctggtgctgcaggaccaccaggccttccgccgtaagaac
tggcgctatcttattctggatgaggcgcagaacatcaagaacttcaagtcacagcgctgg
cagtcactcctcaacttcaacagccagaggcgcctgctcttgacgggaactcccttgcag
aacagcctcatggagctgtggtccttgatgcactttttgatgccccatgtcttccagtct
catcgagagttcaaggagtggttctctaatcccctaactggcatgattgagggcagccaa
gaatataatgaaggtctagtcaagcgcctccacaaggttttgaggccttttttactgcgc
cgagttaaggtggatgttgagaagcagatgcccaaaaagtatgagcatgttatccgctgc
aggctctccaagcgtcaacgctgtctctatgatgacttcatggcacagaccacaactaag
gagacactagccacaggccatttcatgagtgtcatcaacattttgatgcagctgagaaaa
gtttgcaatcatccaaatctgttcgaccctcgacctgttacctcccctttcatcacccca
ggcatctgcttcagcaccgcctctctggtgcttagggccactgatgtccatcccctccag
cggatagacatgggtcgatttgaccttattggcctggaaggtcgtgtctctcgatatgag
gcagacacatttctgccccggcaccgcctctctcgccgggtactgctagaggtggctact
gctcctgaccccccaccccggcccaagccagtcaagatgaaggtcaacaggatgctacag
ccagtacctaagcaagaaggccggacagtggtggtggtgaacaacccacggacgcccctg
ggccctgtcccagttcgaccccctccaggtcctgagctctcagcccagcctacccctggc
ccaacccccccagtgctgccagcaccactgatggtttcagcctcacctactgggcccccg
cttattcctgcgtctcggcctcctggccctgtcctcttgcctccactgcagcccaacagt
ggttctctccctcaggtgttgccatcccccctgggggtcctcagtgggacctcacggcct
cccacgccaaccttgtccctaaagccaacaccacctgccccagttcgcctgagcccagcc
ccacctccaggctcctctagcctgttgaagcccctgacagtgccaccaggctacaccttc
cctcctgctgctgccaccaccacctctaccactacagcaactgctaccactacagcagtg
ccaactccgactcctgcaccacagcgcctcattctatctcccgatatgcaggctcgcctg
ccctcaggtgaagtggtcagcatcgggcagttagcctcattggcacaacgtccagtggct
aatgcagggggaagcaaacctctcaccttccaaatccagggcaacaagctgactttgact
ggtgcccaggtgcgccagcttgctgtggggcagccccgcccgctgcaaaggaatgtggtg
catctcgtgtcagcaggggggcagcaccacctcatcagccagcctgcccatgtggccctc
atccaggccgtggccccgacccctggtcctacccctgtctctgtgctgccttcttcgacc
cccagcaccacccctgcccccactggcctcagccttccgcttgctgctaaccaggtgcca
ccaaccatggtgaataatacaggcgtggtgaagattgtagtgagacaagcccctcgggat
ggactgactcctgttcctccgttggccccagcaccccggcctccgagctctgggcttcca
gctgtgttgactccacgccccacgttaacccctggccggctacccacacctagtctgggt
actgcccgaacccccatgcccacacctactctggtgaggcctcttctcaagctggtccac
agtccttcacctgaaatcagtgcgtcaacccccggagctgcccctttgaccatctcttct
cctctccatgtgccatcctcactccctgtgccagcctcttctccaatgccagttcccaac
tcttctccccttgctagtcctgtgtcctctacggtctcagttccagtgtcatcttcactc
cccatctctgtccccaccacccatcctgccccggcctcagctccactcaccatccccatg
tcaacccccttgcctgtttcggcttcgggcccagctctgttgaccaatgtgactccacca
ctggcaccagttgtcccagcagctcctggacctccctccttggcaccagctggggcttcc
ccatcagcatcagccttgactctaggtttggccacagctccgtccctgtcttcatctcag
acacctggtcactctctattgttggctcccacctcttcacatgttccagggttgaactca
gctgtgcccccagcatgctcaccggtcctggtgccagcttcagctctggccaatcctttt
ccggcagcaccaaatccagctccagctcaggcttcccttctggctccagcatcttctgca
tctcaggctctagccacccctctggctcctatggcggctccacagacagcaattctggct
cctccggctcctcctctggctcctcttccagtcctggcaccatcgccaggtcctgctcct
gtcctggcttcgtcgcagacttcagttccagttatggctccatcatctactccaggaaac
cctttagcctcagcttcaccggtaccagctccaacccctgtgttggctccatcatcaact
caaactatgctaccagccccagttccatcacctctcccgagcccagcttctacgcagaca
ctggccctacccccagctttagcacccactcttggaggctcatctctgtctcagacactc
tctgtgggaacggggaactcccagggaccctttccaactcagacattgtcattgacccca
gcatcatccctggtaccaactccagcccagacactgtctttggcaccaggaccacctctg
ggtccaactcagacgctgtctctggctccagcttctccgatgggcccaaccccggctcac
acgctgactttggctccagcatcgtcaactgcttcactcctggccccagcttcagtgcag
acactgactttgagccctgcccccattcctaccctgggcccggctgcagctcagaccttg
gcgctggccccagcctctacacagtccccagcttcccaggcatcttcccttgtggtttcg
gcatctggtgccactcccttgcctgtcaccatggtatcccggctgcctgtttcaaaggat
gagcctgacacactgacattgcgctctggtccccccagccctccctccactgctacctcg
tttggtggcccccggcctcgacgccaactccccccaccacctcgttcccctttctatctg
gactccctggaggaaaagcggaagcggcagcggtctgaacgcctggaacggattttccaa
cttagtgaggctcatggggccctggcacccgtgtatggggctgaagtcctggatttctgt
accctgccccaacctgttgccagccccattggccctcgttctcctggccccagccacccc
accttttggacttatactgaggctgcccaccgggctgtactgtttccccagcagcgacta
gaccagctgtcagaaatcattgagaggttcatctttgtcatgcctcctgtggaggcacct
cccccttccctgcatgcctgccacccacctccttggctggccccacgtcaggcagccttc
cacgagcaattggcctctgagctctggccccgggctcgtcctctgcaccgtattgtctgt
aacatgcgcacccagttccccgacttgagactcatccagtatgattgcggaaagttgcag
acgttggcagtgctgttacggcagctcaaggcagagggtcaccgagtgctcatcttcacc
cagatgacccgaatgctggatgtattggagcagtttctcacctaccatggccatctctac
ctgcgtctggatgggtctactagagttgagcagagacaggccttgatggaacggttcaat
gcagacaaacgcatattctgcttcatcctttcaactcggagtgggggtgtgggcgtgaac
ctgacaggagcagacactgttgttttttatgacagcgactggaatcccaccatggatgct
caggcccaggaccgctgtcaccgaattggccagacccgggatgtccacatatataggctt
atcagtgaacggacagtggaggagaacattctaaaaaaggcaaatcagaagagaatgttg
ggagacatggccattgagggaggcaatttcaccacagcctattttaaacagcaaaccatc
cgagagctgtttgatatgcccttggaggaaccttctagctcatctgtgccctctgtccct
gaagaggaggaagagactgtggccagcaagcagactcatattctggagcaggcattgtgc
cgggcagaagatgaggaggatatccgtgcagccacccaggccaaggctgaacaggtggct
gagcttgcagaatttaatgagaatgatgggtttcctgctggtgaaggagaggaggccagc
cggcctggggctgaggatgaggagatgtcccgggctgagcaggaaattgctgcccttgta
gaacagctgacccccattgagcgctatgccatgaaattcttggaggcctcactcgaggag
gtgagccgagaggagctcaaacaggcagaagagcaagtggaagctgcccgaaaagacctg
gaccaagccaaggaggaagtgttccgcctaccccaagaggaagaggagggactgggggct
ggggatgagagttcctgtgggactggtggaggcagccaccggcgcagtaaaaaggccaaa
gcccctgagaggccagggactcgtgtcagtgagcgtcttcgtggagcccgggctgagact
caaggggcaaactacactcctatcatatctgcccatcaaactcgcagcaccaccacgctg
ccccgctgcagtcccgccagggagcgagttcccaggccagcacctaggcctcgacccact
ccagcttcagctccagctgcaattcctgcccctgtccctgtcccagtctctgtcccatta
cccatttcagccccaaatccaataaccattcttcctgtccatatcttgccttctcctccc
cctcctccacagattcctccttgttctcctgcctgtacccctcctcccgcctgtacccct
ccaccagctcatacacctcctccagcccaaacctctcttttaactccctttcctctcttg
gttggtccaccttctgtgcccatctctcccccagtcaccagcctccccttgggcttgagg
cctgaggcagaactgtgtgcccaggcattggcatctccagagtccctggaactggctact
gtggccagttcagagacctcctcacttactcttgtgcctcctaaagatctgttgccagtt
gctgtggagatcttgcctgtgtcagagaagaacctttctctcgccccttctgcatccagt
ccaaccttggaggctggcaacgtccccaacggtcaagagcaggaggcaccagattctgct
gaggggaccaccgttacagtgcatcctgaaggtgaagagttgcccgtgtgtgtgagtgaa
agcaatggcctggagctcctaccctcagcagcatctcatgagccacttcaggagcccttg
gaggctgacaggaactcagaagagctggcagaggcccagaccccaaccttcagcccagag
aagccacaggaactcgtaacagctgaggtcacagctccatccacctcatcttcagccact
tcttcgcctgagggttcttcacctgcccgacctcctcggcgtcgcaccagtgctgatgtg
gaaattaggggtcaagggactggtcggccagggcaaccaccaggccccaaagtacttcga
aagctgccaggacggctagtaactgtggtagaggaaaaggaactggtgcggcggcggcgg
cagcagcggggagctgccagcaccttagtgtctggggtctctgagactagtgccagccca
ggaagtccatctgttcgaagtatgtcagggccagaatcctcccctcccactagtgggccc
tgtgaagctgctccttcatcctcactgcccactccaccgcagcagcccttcatcgctcgc
cgtcacattgagctgggggtgactggtggtggcaccccagagaatggagacggagcactg
cttgccatcaccccacctgctgtgaaacgtcggagggggaggcctcccaagaacaggtct
ccagcagatgctgggagaggtgtggatgaggcaccctcattcaccttgaagggaaaaacc
aatggggctgacccagtccctggggctgggaccctaattattggagagcctgtcctggaa
ccacagcttattcccgggccccagcctcttggatcccagtcagttcacagacccaatccc
atcctgtcacctgtggagaaaagaaggcgaggacggccccctaaggcacgagatttgccc
atccctgggatcatttcctctccaggggatggcaactccgaaagtcggacacagccaccc
ccgctcccaccacccctaaccccactcccaccactgctagcttgtccctccgctactgtt
gccaacactgtcaccactgtcaacatttcagcgtctccacccaaacggaagagaggccga
cctcccaagaatcctccatcacctcggcccagccagctccctgtgttggaccgtgacagc
acttctgtccttgaaagctgtggattggggaggcgacggcaaccccagggccagggggag
agtgagggcagttcttctgatgaagatggaagccgcccccttacccgcctggcccgcctt
cggcttgaggcagagggaattcgaggacggaagagtggagggtccatggtggtggccgta
attcaggatgacctggacttagtagatagtgggccaggcgggttggaactgacacctcct
gtggtctcagccccaaaactgcgctcgacccggctgcgtccagggtctctagtcacccca
ctagagactgagaaggtgcctcgcaaacgagcaggggccccagttggtgggggtcctggg
ccggcgaagcggggccgcctacagcccccaagtcccctggggcctgagggttcagtagag
gagtctgaacctgaaccctcaggtgaggaggaggaaggggatgggaccccacacagacgg
cctggcccccgcaggcttgttgggaccaccaaccaaggggaccagcgcatcctgcgcagc
agtgcccctccctccctggctggccctgctgttagtcacagaggccgcaaggccaagacg
tga
DBGET
integrated database retrieval system
