Callithrix jacchus (white-tufted-ear marmoset): 100412527
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Entry
100412527 CDS
T03264
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100412527 (ZSWIM8)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
100412527 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
100412527
NCBI-ProteinID:
XP_035123839
Ensembl:
ENSCJAG00000001500
LinkDB
All DBs
Position
12:complement(52858309..52874324)
Genome browser
AA seq
1905 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCAQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFNWEEAYPLPGVTYSGTDRKLALCWARALPSRPGVSRSGGLEESRDRPRPLPAEPAV
RPKEPGTKRKGLGDGVSSSQRGPRRLSAEGGDKALHKMGPGGGKAKALGGAGSGSKGSAG
GGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPPHGGSRGPSTFL
PEPPDTYEEDGGVYFSEGPEPPTASAGPPGLLPGEICTRDDLPSTDESGSGLPKTKEAAP
AVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEVLFACAEAL
HAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLSKAAFL
LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVAALLKKIPLGPSEMS
TMRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNSETPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQAKLKKILDKLLDRE
SQTHKPQTLSSFYSSSRPATASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPG
PTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS
SGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAR
EGATSCSASGIRAAGEAGRGLTEGRGGPGTEPVTVAAAAVTAAATVVPVISVGSSLYPGP
GLGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVPSSAYPQGVHPA
FLGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSV
HPASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLAL
EMLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGDRHGDAAAAESRSCPQPPACPGLP
PTGATLPAGIHAVHPPPIDSPDPCGLRRLCECDPERPQRLLPDAHGHDAVQRYPAEPQAQ
QTDQGAVAAGLTRDGHILPLSLLPLGSYMGTQAYGYGGPSHRGNESWLDRSSSLSSLVAQ
TDSCSWAVAVGQEVSDPRSLGLGETALSGRGHWVASGIYLAFINI
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgcggagtgggaggacggagagcgcttctcattcgaggattcagac
cgttttgaggaggattcgctctgttccttcatctccgaggccgagagcctctgccagaac
tggcggggatggcgcaaacagtcagcggggcccaattcccccactggcggcggtggcgga
ggtggcagtggcggtaccagaatgagagatggactggtgatcccattggtggagctgtca
gcaaagcaggtggcatttcacatcccatttgaagtggtggagaaagtttacccaccggtg
cctgagcagctacagctccgaattgctttttggagctttccggaaaatgaagaggacatt
cggctgtattcgtgcctggccaatggcagtgcagatgagtttcagcgaggggatcagctc
ttccgcatgagggctgtgaaggacccattgcagatagggttccacctgagtgctacagtg
gtgccacctcagatggtccctcccaaaggggcctacaatgtagctgtgatgtttgaccgc
tgccgggtcacgtcctgcagctgtacctgtggggctggggccaaatggtgcacccacgtc
gtggcactctgtctcttccgcatccacaacgcttctgcagtctgcctgcgagccccagtc
tcagagtccctgtcccggctacagagggaccagctgcagaagtttgctcagtacctcatt
agtgagctccctcagcagatcctccccacagctcagcgtctcctggatgaactcctgtct
tcccagtcaacagccatcaatacagtgtgtggagctccggaccccacagcagggccctcg
gcatcggaccagagtacttggtatctggatgaatcgacactcactgacaacatcaagaag
accctgcacaagttctgtggtccttcccctgtggtcttcagtgatgtgaactccatgtat
ctgtcttccacggagccgccggccgctgctgaatgggcatgtctgctgcgccctctgagg
ggccgtgaaccagagggtgtctggaacctgctgagcatcgttcgggagatgttcaagcga
agggacagcaatgctgcccccttgttggaaatcctcactgaccagtgcctgacctatgag
cagataacaggttggtggtatagcgtgcgcacctcagcctcacacagcagtgccagtggg
cacacgggtcgtagcaacgggcagtcagaggtggcagcccatgcctgtgccagcatgtgt
gacgagatggtcacactgtggaggctggctgtgctggaccctgcactcagccctcagcgg
cgccgggaactgtgtgcgcagctgcggcagtggcagctgaaggtgattgagaatgtcaag
cggggccaacacaagaagacactggagcggctcttccctggcttccggccagcggtggag
gcctgctacttcaactgggaagaggcctacccacttcccggtgtcacctacagtggcact
gacaggaagctggcactgtgctgggcccgggccctgccctctcggccaggtgtctcccgc
tctgggggcctggaggaatcccgggaccggccccgaccgcttcctgctgagccagctgtg
cggcccaaggagcctgggaccaagcgcaagggcttgggtgatggggtctcctcatcacag
cggggtccccgccgcctctcagctgaagggggagataaagctctccataagatgggtcca
ggtgggggcaaagccaaagcactgggtggggctggcagtgggagcaagggttcagcaggt
ggtgggagcaagcgacggctgagcagcgaagacagctccctggagccagacctggctgag
atgagcctggatgacagcagcctggccctgggcgcagaggccagcaccttcgggggattc
cctgagagtcccccgccctgtcctccccacggtggctcccgaggcccttctactttcctt
cctgagcccccagatacttatgaagaagatggtggtgtgtacttctcagaagggcctgag
cctcccactgcctctgccggcccccctggcctactgcctggggaaatctgtacccgggac
gacctcccttctacagatgagagtggcagtgggctccccaaaaccaaagaggcagcccct
gcagttggagaggaggatgatgactaccaggcgtactatctgaatgcccaggatggggct
gggggcgaggaagagaaagccgagggcggggctggggaggagcacgacctgtttgctggg
ctgaagccactggaacaggagagccgcatggaggtactgtttgcctgtgctgaagccctg
catgcacatggctatagcagtgaggcctcccgtctcactgtggagcttgcccaggatcta
ctggccaacccacccgacctcaaggtagagccgccccctgcaaagggcaagaagaacaag
gtgtccacaagccgtcagacctgggtggctaccaacaccctgagcaaggcggctttcctg
ttgacagtgttaagtgagcgtccagagcaccacaacctggccttccgagttggcatgttt
gccttggagctacagaggcctccagcttctaccaaggccttggaggtgaagctggcatac
caggagtctgaggtggctgccttgctcaagaagatccctctgggtccgagtgagatgagt
accatgcggtgccgggcagaggagcttcgggaggggacactctgtgactatcggcctgtg
ttgcctctcatgttggccagtttcatctttgacgttctctgtgctccagtggtttctccc
acaggttcccggcccccaagtcgcaactggaacagcgaaacacctggggatgaggagctg
ggatttgaagcagcagttgctgccttgggcatgaaaacaacagtgagcgaggcagaacat
cccctcctatgtgaaggcacacgtcgggagaagggtgacctggcattagcactaatgatc
acttacaaggacgaccaggccaagcttaagaagatcttagacaaactcttggaccgagag
agccagacacataagccacagacgctgagttctttctactcatctagccgcccagccaca
gccagccagaggtctccttcaaagcacgggggcccatctgccccaggggccctgcaacca
ctgacctcaggctctgcagggcctgctcagccagggagtgtggcaggggctgggccaggc
cccactgagggcttcacagagaagaatgtgcctgagagttccccacattccccctgtgag
ggtcttccatctgaggcagctttgaccccaaggccagaggggaaggttccaagccgcttg
gcacttggcagtcgtggaggctataatggacgaggatggggttccccaggacggcctaag
aagaagcacacaggcatggccagcattgacagcagtgcccctgaaacaacatcggatagc
tcccccaccttaagccggagaccacttcgagggggctgggcccccacctcctggggtcga
ggacaggacagtgacagcattagcagctcttcttcggactccctgggctcctcatcctcc
agtggaagtcgtcgggccagtgccagtggaggagcccgggcaaagaccgttgaagttggc
aggtacaagggccgccgccccgagagtcatgccccccatgtacccaatcagccatcagag
gcagctgcacacttctacttcgagctggcgaagacagtgctgatcaaggcagggggcaac
agcagcacttccattttcacacatccatcttcctcagggggccaccagggtcctcaccgc
aacctgcacctttgcgccttcgagattgggctttatgcccttggcctgcacaactttgtt
tctcccaactggctctcacgtacttattcttcccacgtttcctggattacaggccaggcc
atggagataggcagcgcagccctgactatactggtagaatgctgggatgggcacctgacg
ccccctgaggttgcatccttggctgacagggcatcacgggcaagagactccaatatggtg
agggcagcagcagaactggccctgagctgcctgccccatgcccatgcattgaaccctaat
gagatccagcgggccctggtgcagtgcaaggagcaggacaacctgatgttggagaaggcc
tgcatggcagtggaagaggcagctaagggtgggggcgtgtaccctgaagtgttgtttgag
gttgctcaccagtggttctggctatatgagcaaactgcaggtggctcatccacagcccgt
gaaggggctacaagctgtagtgccagtgggatcagggcagctggggaggctgggcggggt
ctgactgagggtagagggggcccagggactgaaccagttacagtggcggcagcagcagtg
acagcagcagccacagtggtgcccgtcatctcggttgggtccagtttatacccgggtccg
ggactggggcatggccactcccctggcctgcacccctacactgctctacagccccacctg
ccctgtagccctcaatacctcactcacccagctcaccccgcccatcccatgcctcacatg
ccccggcctgctgtcttccctgtgcccagctctgcatacccacagggtgtgcatcctgca
ttcctgggggctcagtacccttattcagtgactcctccctcacttgctgctactgctgtg
tctttccccgtcccttccatggcacccatcacagtacatccctaccacacagagccaggg
cttccactgcccaccagtgtggcctgtgagttgtggggccagggaacagtgagcagtgtc
catccagcatccacgtttccggccatccagggtgcctcgctgcctgccctgaccacacag
cccagccctctggtgagcggaggttttccaccgcccgaggaggagacgcacagtcagcca
gtgaatccccacagcctgcaccacctgcacgctgcctaccgtgtcggaatgctggcactg
gagatgctgggtcgccgggcacacaacgatcaccccaacaatttctcccgctcccccccc
tacactgatgatgtcaaatggttgctggggctggcagcaaagctgggagatcgtcatgga
gacgctgcagcggctgagtcccgctcatgcccacaaccacctgcgtgccccggccttcca
ccaactggtgcaacgctgccagcaggcatacatgcagtacatccaccaccgattgattca
cctgacccctgcggactacgacgactttgtgaatgcgatccggagcgcccgcagcgcctt
ctgcctgacgcccatgggcatgatgcagttcaacgatatcctgcagaacctcaagcgcag
caaacagaccaaggagctgtggcagcgggtctcactcgagatggccacattctccccctg
agtcttttacccctagggtcctatatggggacacaggcctatggctatgggggcccctca
cacaggggtaatgaatcttggctggacagatcatcctcactcagttccctggtagcccag
actgacagctgctcttgggctgtagctgtgggccaagaagtctcagatcctagaagccta
gggctgggggagacagccttgtctgggagggggcattgggtggcctctggtatttatttg
gcatttataaatatataa
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