Callithrix jacchus (white-tufted-ear marmoset): 100412793
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Entry
100412793 CDS
T03264
Symbol
ARHGEF28
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X2
KO
K21072
A-kinase anchor protein 28
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05135 Yersinia infection
100412793 (ARHGEF28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100412793 (ARHGEF28)
Membrane trafficking [BR:
cjc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100412793 (ARHGEF28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
PHD
C1_2
SOS1_NGEF_PH
PHD_2
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
100412793
NCBI-ProteinID:
XP_035147309
Ensembl:
ENSCJAG00000016645
LinkDB
All DBs
Position
2:complement(133886219..134217437)
Genome browser
AA seq
1705 aa
AA seq
DB search
MELSCSEAPLYGQMTVYAKFDKNVYLPEDAEFYFTYDGSHQRHVVIAERIEDNVLQSSIP
GHGLQETVSVSVCLCSEGYSPVTMGSSSVTYMDNMACRLARLLVMQTDRLTASSHQTLLT
PFALKAEALPALDEELVLALTHLELPLEWTLLGSSSLEVSSHRESLLHLAMRWGLAKLSQ
FFLCLPGGVQALALPNEEGATPLDLALRGGHSKLAEDVTNFQGRWSPSFSRVQLSEEASL
HYVHSSETLTLTLNHTAEHLLEADIKLFRKYFWDRAFLVKAFEREARPEERTAMPSGAAE
TEEEIKNTVSSRSVPEKEDVKCDKSLMVQQNEHEDQHSLDLDRSFDVLKKSKPPSMLLAA
GPLSDMLNGGDEVYANCMVIDQVGDLDISYINIEGINATTSPESRGCTLGPQSSKHILPT
ETSPSVYPLSENDEGTAHTEAQRSFMSPSSSCTSNLNLSFGWHGFEKEQSHLKKRSSSLD
ALDADSEGEGHSEPSHLCYTPGSQSSSRTGIPSGDELDSFETNTELDFNISRAESLSLSS
NLQSKESLHSGVRSRSYSCSSPKISLGKTRLVRDLTVCNSSEEQRAYSLPEPPREKRIQE
EEWDKYIIPAKSESEKYKVSRTFSFLMNRMTSPRNKSKTKSKDAKDKEKLNRHQFVPGTF
SGVLQCSVCDKTVLGKESLQCSHCNTSVHKGCKDAAPPCTKKFQEKYNKNKPQTILGNSS
FRDIPQPGLSLHPSSSMPVGLPTGRRETVGQVHPLSRSVPGTTLESFRRSATSLESESDS
NSCRRRSHSDELLQSMGSSPSTESFIMEDVVDSSLWSDLSSDAQEFEAESWSLVVEPSFC
NRQEKDVIKRQDVIFELMQTEMHHIQTLFIMSEIFRKGMKEELQLDHSTVDKIFPCLDEL
LEIHRHFFYSMKERRQESCAGSDRNFVIDRIGDILVQQFSEENASKMKKIYGEFCSHHKE
AVNLFKELQQNKKFQNFIKLRNSNLLARRRGIPECILLVTQRITKYPVLVERILQYTKER
TEEHKDLCKALCLIKDMIATVDLKVNEYEKNKKWLEILNKIENKTYTKLKNGHVFRKQAL
ISEERTLLYDGLVYWKTATGRFKDILALLLTDVLLFLQEKDQKYIFAAVDQKPSVISLQK
LIAREVANEERGMFLISASSAGPEMYEIHTNSKEERNNWMRRIQQAVESCPEEKGGRTSE
SDEERRKAEARVAKIQQCQEILTNQDQQICAYLEEKLHIYAELGELSGFEDVHLEPHLLI
KPDAGEPPQAASLLAAALKEAESLQVAVKASQMGNESQSGEDSCGDSVLTDTFSSQDAPG
SQTASLVTGGREGRGCSDVDPGIQGVVTDLAVSDAGEKEECRNITGSSQSEIVQAIQNLT
RLLYSLQAALTIQDSHIEIHRLVLQQHEGLSPGHSVLRGGPWQDQKSRDVDRQREELANV
HELQHQLQQEQRRWLRRCDQQQRAQAARESWLQERERECQLQEQLLLQSQGELDLQLQEY
QHSLERLREGQRLVERERARMQAQQSLLSHWKQGRQRSLPVAFLPDGPEVIELNRSESLC
HENSFFINEALVQMSFNTFNKQNPSVIHKDANCPTTQSNSDLVRTSENQEDLKTDLSQPL
NVSHELWTAAGSCHQMLPLHESSKDSCKNDLDTSQTESPTPHNSNSHRPQLQAFITEAKL
NLQTRTMTRQDGETGDGAKENIVYL
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggagttgagctgcagcgaagcacctctttacgggcagatgacagtctatgcgaagttt
gacaaaaatgtgtatcttcctgaagatgctgagttttactttacttatgacggatctcat
cagcgacatgttgtgattgcagagcgcatcgaggataacgttctccagtccagcatccca
ggccatgggcttcaggagactgtgtcagtgtctgtgtgcctctgctcagaaggctactct
ccggtgaccatgggctccagttcagtgacctacatggacaacatggcttgcaggctggct
cgtctgctggtgatgcagaccgatcgcctcacagccagcagccaccagaccctgctgacc
ccatttgccttgaaggcagaagcgctgcctgccttggatgaggagctcgtgctggctctg
acccatctggaattgcctctagagtggactctgttgggaagttcttcactcgaagtatct
tctcacagagaatctcttctacacctggctatgagatggggcctggctaagctttcccag
ttcttcttgtgtctcccagggggagtccaggccttggctttacccaacgaagagggtgcc
acaccattagacttagctttacgtggtggacactccaagctggcagaagatgtcacaaat
tttcagggcagatggtccccaagcttctcccgagtgcagctcagtgaagaagcctccttg
cattacgttcactcatcagaaacgctgaccctgacccttaaccacacagccgagcatttg
ttggaggcagatattaaactcttccggaaatacttttgggatagagcctttcttgtcaag
gcctttgagcgagaagccaggccagaggaaagaacagctatgccctccggtgctgcagaa
actgaagaagagattaagaatacagtgtccagcagatcagtgccagaaaaggaagatgta
aagtgtgacaaaagcctcatggttcaacagaatgaacatgaagaccagcacagccttgat
ttggatcgctccttcgatgtcctaaagaaatccaagccgccctcgatgttgcttgctgca
ggcccgctttcggacatgctgaacggaggtgatgaagtctatgctaactgtatggtgatt
gatcaggttggcgatttggatatcagctatattaatatagagggaatcaatgccactacc
agccctgaatccagaggttgcactctggggcctcagagcagcaaacacatcctccctaca
gaaaccagccccagtgtgtacccactaagtgagaacgacgaagggacagcacacaccgaa
gcccagcggtccttcatgtcaccatcaagttcatgtacttccaacttgaatctttctttt
ggttggcatggatttgaaaaggaacagagtcatctaaagaaaagaagttctagccttgat
gccttggatgccgacagtgaaggggaaggacattctgagccgtcacatctctgttacact
ccagggtctcagagctcctcaagaactgggattcctagtggggatgaattggactctttt
gagactaacactgaactggattttaatatctcccgggctgaatcactttctctatcaagt
aatctacagtcgaaggaatcattgcattctggagttcgctcacgttcttattcttgctca
tcacccaaaatttctttaggaaaaactcgtttggtgcgtgatttaacagtgtgcaattca
agtgaagagcaaagagcttacagcttaccggagccaccaagagaaaaaagaattcaggaa
gaagaatgggataaatacatcatacctgccaaatcagagtctgaaaaatataaagtgagt
cgaactttcagtttcctcatgaataggatgactagccctcggaataaatcaaagacgaaa
agcaaggatgccaaagacaaagagaaactgaaccggcatcagtttgtcccaggaacattc
tctggggttctgcagtgttcggtgtgtgataaaacagtcctggggaaagagtcactgcag
tgttcccattgtaacacaagtgtgcacaagggttgcaaagatgctgcacctccatgcacc
aagaaattccaagagaaatacaacaagaacaaaccacagaccatccttggaaactcttca
tttagagacatcccgcagcctggtctctccttgcacccttcttcctccatgcctgttgga
ttgccgactggaaggagggagaccgtgggacaggtccatccattgtccagaagtgttcca
ggcaccaccttggaaagcttcaggagatcagcaacatccttggagtctgagagtgacagt
aacagttgcagaaggaggtctcattccgatgagctgctacagtccatgggttcttctccc
tctacagagtctttcataatggaagatgttgtggattcttctctatggagtgacctcagc
agtgatgcccaggagtttgaagcagaatcttggagtcttgtggtggaaccctcattttgt
aatagacaggagaaggatgtcatcaaaagacaggacgtcatttttgagctaatgcaaaca
gagatgcatcacatccagaccctgttcatcatgtctgagatcttcaggaaaggcatgaaa
gaggagctgcagctagatcacagcaccgtggataaaattttcccctgtttagatgagttg
cttgaaatccacaggcatttcttctacagtatgaaggagcgaaggcaggagtcctgtgct
ggcagtgacaggaattttgtgattgaccgaattggagatattctggtacaacagttttca
gaagaaaatgcaagtaaaatgaagaaaatatatggagaattctgtagccatcataaagaa
gctgttaacctctttaaagaactccagcagaataaaaagtttcagaattttattaagctc
cgaaatagtaatcttttggctcgccgccgaggaattccagaatgcattctgttggtcact
cagcgtattacaaaataccctgtcttggtggaaaggatattgcagtacacaaaggaaaga
actgaagaacataaagacttatgcaaggctctttgcttaattaaagacatgattgcaaca
gtggatttaaaagtcaatgaatatgagaaaaacaaaaaatggcttgagatcctaaataag
attgaaaacaaaacgtacacaaagctcaaaaatggacatgtatttaggaagcaggcactg
ataagtgaagagaggactctgttatatgatggccttgtttactggaaaactgctacaggt
cgtttcaaagatatcctagctctccttctaactgatgtgctgctctttttacaagaaaaa
gaccagaaatacatctttgcagccgttgatcagaagccatcagttatttcacttcaaaag
cttattgctagagaagttgctaatgaggagagaggaatgtttctgatcagtgcttcgtct
gctggtcctgagatgtatgaaattcacaccaattccaaggaggaacgcaataactggatg
agacggatccagcaggctgtagaaagttgccctgaagaaaaagggggaaggacaagtgaa
tctgacgaagagaggaggaaagctgaagccagagtggccaaaattcagcaatgtcaagaa
atactcactaaccaagaccagcaaatttgtgcgtatttggaggagaagctgcatatctat
gctgaacttggagaactgagcggatttgaggacgtccatctagagcctcacctccttatt
aaacctgatgcaggcgagcctccccaggcagcctcattactggcagcagcactgaaagaa
gctgagagcctacaagttgcagtgaaggcctcacagatgggcaatgagagtcagtcaggc
gaggacagttgtggagactctgtgttgacggacacgttcagttctcaggatgcaccagga
tcgcagactgcctcactagtcacaggagggagagaaggaagaggctgttcggatgtggat
cccgggatccagggtgtggtaaccgacttggccgtctctgatgcaggggagaaggaggaa
tgtagaaatattacaggttcttcacagtcagagattgtacaagccatacagaatttaacc
cgtctcctatacagccttcaggccgccttgaccattcaggacagccacattgagatccac
aggctggttctccagcagcacgagggcctgtcacccggccactctgtcctacgaggcggc
ccctggcaggaccagaagtcccgcgacgtggacaggcagcgcgaggagctggccaacgtg
cacgagctccagcaccagctccagcaggagcagcggcgctggctccgcaggtgtgaccag
cagcagcgggcgcaggcggccagggagagctggctacaggagcgggagcgggagtgccag
ttgcaggagcaactgctgctgcagagccagggcgagctggacctccagctccaggagtac
cagcacagtctggagcggctgagggagggccagcgcctggtggagagggagcgggcaagg
atgcaggcccagcagagcctgctgagccactggaagcaaggccggcaaagaagcctgccc
gtggcatttcttcctgatggccctgaggtaatagaacttaatcgatctgagagtttatgt
catgaaaactcattcttcatcaatgaagctttagtacaaatgtcatttaacactttcaac
aaacagaatccatcagttattcataaggatgccaattgccccacaactcaatctaattct
gacttggtaaggactagtgaaaatcaagaagacctcaagacagacctttcccagcctttg
aatgtcagccacgaactgtggacagctgctgggtcctgccatcagatgcttcctctccat
gaaagcagcaaggattcttgtaaaaatgatttggacacctcccagactgagtccccaacc
ccccacaattcaaattcacaccgccctcagctgcaggcgtttataacagaagcaaagcta
aatctacagacaaggacgatgaccagacaggatggggaaactggagatggagccaaagaa
aatattgtttacctctaa
DBGET
integrated database retrieval system
