Callithrix jacchus (white-tufted-ear marmoset): 100412955
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Entry
100412955 CDS
T03264
Symbol
CDX2
Name
(RefSeq) homeobox protein CDX-2 isoform X1
KO
K22234
homeobox protein CDX2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
100412955 (CDX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100412955 (CDX2)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100412955 (CDX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100412955
NCBI-ProteinID:
XP_008996313
UniProt:
F7GTI8
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All DBs
Position
5:complement(143182548..143198341)
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AA seq
305 aa
AA seq
DB search
MYVSYLLDKDVSMYPSSVRHSGGLNLAPQNFVSPPQYPDYGGYHVAAAAAAAANLDNAQS
PGPSWPAAYGAPLREDWNGYAPGGAAAAANAVAHGLNGGSPAAAMGYSSPADYHPHHHPH
HHPHHPAAAPSCASGLLQTLNPGPPGPAATTAAEQLSPGGQRRNLCEWMRKPAQPSLGSQ
VKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAK
ERKINKKKLQQQQQPPQPPPPQPPQPQPGPLRSVPESLSPVSSLPGSVPGVLGPTGGVLN
PTVTQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagctacctcctggacaaggacgtgagcatgtaccctagctccgtgcgccac
tctggcggcctcaacctggcgccgcagaacttcgtcagccccccgcagtacccggactac
ggcggttaccacgtggcggccgcggctgcggcggcagcgaacttggacaacgcgcagtcc
ccggggccgtcctggccggccgcgtacggcgccccgctccgggaggactggaatggctac
gcgcccgggggcgccgcggccgccgctaacgccgtggctcacggccttaacgggggctcc
ccggccgccgccatgggctacagcagccctgccgactaccacccgcaccaccacccgcat
caccatccgcaccacccggccgccgcgccttcctgcgcttccgggctgctgcagacgctc
aacccgggccctcccgggcccgccgccaccactgccgcggaacagctgtcccccggcggc
cagcggcggaacctgtgcgagtggatgcggaagccggcgcagccgtccctcggcagccaa
gtgaaaaccaggacgaaagacaaataccgagtggtgtacacggaccaccagcggctggag
ctggagaaggagtttcactacagtcgctacatcaccatccggaggaaagccgagctggcc
gccacgctggggctctctgagaggcaggttaaaatttggtttcagaaccgcagagccaag
gaaaggaaaatcaacaagaagaagttgcagcaacagcagcagccgccgcagccgcctccg
ccacagcctccccagccgcagccaggtcctctgagaagtgtcccagagtccttgagtccg
gtgtcttccctgcctggctctgtccctggggttctggggccgactgggggggtgctaaac
cccaccgtcacccagtga
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integrated database retrieval system
