Callithrix jacchus (white-tufted-ear marmoset): 100413170
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Entry
100413170 CDS
T03264
Symbol
GTF2F1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X2
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100413170 (GTF2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjc03021
]
100413170 (GTF2F1)
Transcription machinery [BR:
cjc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100413170 (GTF2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
100413170
NCBI-ProteinID:
XP_008985308
Ensembl:
ENSCJAG00000016669
LinkDB
All DBs
Position
22:complement(5645426..5659864)
Genome browser
AA seq
516 aa
AA seq
DB search
MAALGPSSQNVTEYVVRVPKNTTKKYNIMAFNAADKVNFATWNQARLERDLSNKKIYQEE
EMAESGAGSEFNRKLREEARRKKLGIVLKEFRPEDQPWLLRVNGKSGRKFKGIKKGGVTE
NTSYYIFTQCPDGAFEAFPVHNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQR
RLKDQDQDEDEEEKEKRGRRKASELRIHDLEDDLEMSSDASDASGEEGGRAPKAKKKAPL
AKGSRKKKRKKGSDDEAFEDSDDGDFEGQEVDYMSDGSSSMEEPETKAKVPQQEEGPKGV
DEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSDESDSSEESDIDSEASSAL
FMAKKKTPPKRERKLSGGSSRGNSRPGTPSTEGGSTSSTLRAAASKLEQGKRVSEAPAAK
RFRLDAGSQSLSGKSTPQPPSGKSTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQTKK
TGLSSDQTVNVLAQILKRLNPERKMINDKMHFSLKE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctaggccccagcagccagaatgtcactgaatacgtcgttcgagttccgaag
aatacaaccaaaaaatataacatcatggcttttaatgcagctgataaagtcaactttgcc
acgtggaatcaggcccggctggagcgggacttgagcaataagaaaatctatcaagaggag
gagatggctgagtcaggcgcgggcagcgagttcaaccgcaagctccgggaggaggctcgg
aggaagaaactcggcatcgtcctcaaggagttccggcccgaggaccagccctggctgctc
cgtgtcaacggcaaatctggcaggaagttcaagggcatcaagaagggaggcgtgacagaa
aacacgtcctactatatcttcacccagtgccccgacggggcctttgaggccttccccgtg
cacaactggtacaatttcacgccgctggcccggcaccgcacgctcactgctgaggaggcc
gaggaggaatgggagaggaggaacaaggtgctaaaccacttcagcatcatgcagcagcgg
cggctcaaggaccaggaccaggacgaggacgaggaggagaaggagaagcgcggccgcagg
aaggcgagcgagctgcgtatccacgacctggaggatgacctggagatgtcgtccgatgcc
agtgacgccagcggtgaggagggtggcagagcccccaaggccaagaagaaggcgccgctg
gccaagggcagcaggaagaagaagaggaagaagggctcagatgacgaggccttcgaggac
agtgatgatggggactttgagggccaggaggtggactacatgtcggacggctccagctcc
atggaagagcctgagaccaaggccaaggtgccgcagcaggaggaggggcccaagggcgtt
gatgagcagagcgacagtagtgaggagagtgaggaggagaagccacctgaggaggacaag
gaggaggaggaggagaagaaggcgcccaccccacaggagaagaagcgcaggaaagacagc
agcgatgaatcagacagctcagaggagagtgacattgacagtgaggcctcctcggccctc
ttcatggcgaagaagaagacaccacccaagagagagcggaagctgtcgggagggagctca
aggggcaacagccgcccgggcacgcccagcacagagggcggcagcacgtcctccaccctg
cgtgccgctgccagcaaactcgagcaagggaagcgggtgagcgaggcgcctgcagcgaag
cggttccgtctggacgcggggtcccagagcctgtcggggaagtcgactccgcagccacca
tcgggcaagtcgacacccagcagtggggacgtgcaggtgactgaggacgccgtgcgccgc
tacctgacacggaagcccatgaccactaaggacctgctgaaaaaattccagactaagaag
acagggctgagcagcgaccagacggtgaacgtgctggcccagatcctcaagcgcctcaac
cccgagcgcaagatgatcaacgataagatgcatttctccctcaaggagtga
DBGET
integrated database retrieval system
