Callithrix jacchus (white-tufted-ear marmoset): 100413362
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Entry
100413362 CDS
T03264
Symbol
DSC1
Name
(RefSeq) desmocollin-1 isoform X1
KO
K07600
desmocollin 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cjc04515
]
100413362 (DSC1)
Cell adhesion molecules [BR:
cjc04515
]
Cadherins
Major cadherins
100413362 (DSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Fibulin_C
RET_CLD1
UPF0114
Motif
Other DBs
NCBI-GeneID:
100413362
NCBI-ProteinID:
XP_003734680
Ensembl:
ENSCJAG00000020776
LinkDB
All DBs
Position
13:complement(69318538..69350265)
Genome browser
AA seq
894 aa
AA seq
DB search
MAVASAAPGSIFCKQLLFSLLVLILLCDACQKISLRVPSHLQAETLVGKVNLEECLKSAS
LILSSDPTFRILEDGSIYTTHDLILSSERKSFSIFLSDRQRQEQKTIEVVLSARENKAPK
KRHAKDTALKRSKRRWGPIPCSLMENSLGPFPQHIQQIQSDTAQNYTIFYSISGPGVDKE
PYNLFYIERDTGDIFCTRSIDREQYQQFALYGYATTADGYAPEYPLPLIIKIEDDNDNAP
YFENKLTVFTVPENCRTGTSVGQVTAIDLDEPDTLHTRLKYKILQQIPDHPKHFSVHPDT
GVITTTTPLLDREKCDIYQLIMEVRDMGGQPFGLFNTGTITISLEDENDNSPFFTETSYV
TEVEENRIDVEILRMKVQDQDLPNTAHSRAVYTILQGNENGNFKISTDPNTNEGVLCVVK
PLNYEVNRQVILQVGVVNEAQFSKAANSQTPTMCTTTVTVKIKDRDEGPECHPPVKVIQS
EDGFPAGQELLGYKALDPETRSGEGLRYKKLGDEDNWFEINEETGDLRTVKVLDRESKFV
KNNQYNISVVAMDAVGRSCTGTLVVSLTDKNDHPPQINKEVTICQNNEDFAVLAPVDPDG
PENGPPFQFLLDNSASKIWVLEEKDGKTAILRQRQNLDYNNYFVPIKIKDRHGLVATHVL
SVRVCDCSVSSECNLPAKNLRDVRPNVILGRWAILAMVLGSVLLLCVLFTCFCVTAKRTV
KKCFPEDIAQQNLIVSNTEGPGEEVTEANIRLPIQTSNICDTSMSAGTVGGQGIKTQQSF
EMVKGGYTLDSNKGGGHQTLESIKGVGQGDTGRYTYTDWQSFTQPRLGEKVYLCGQDEEH
KHCEDYVRSYNYEGKGSLAGSVGCCSDRQEEEGLEFLDHLEPKFRTLAKTCVKK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcctccgctgccccagggagcatcttctgtaagcagctccttttctctctc
ctggttttaatattactttgcgatgcttgtcagaaaatttctcttcgagttccttctcat
cttcaggctgaaacacttgtaggcaaagtgaatctggaggagtgtctcaagtcagccagc
ctaatcctgtccagtgaccctaccttcagaattctagaagatggctccatttacacaaca
catgacctcattttgtcttctgaaaggaaaagtttttccattttcctttcagaccgtcag
agacaggaacaaaaaacaatagaagttgtactgtcagcaagagaaaacaaggctcctaag
aagagacatgccaaagacacagccctcaagcgcagcaagagacgatggggtcctattcca
tgttcattgatggagaactcattgggtccatttccacaacacattcagcagatccaatct
gacactgcacagaattacaccatcttttattccataagtggaccaggcgtggacaaagaa
ccctacaacttgttttacatagagagagacactggggatatcttttgtacaagaagcatt
gaccgtgagcaatatcaacagtttgcgctatatggctatgcaacaaccgcagatggctat
gccccagaatatccactccccttgatcatcaaaattgaagatgataatgataatgcccca
tattttgaaaacaaactgactgtctttactgtacctgaaaattgccgaactggaacttca
gtgggacaagtgactgccatagaccttgacgaacctgacactctccatactcgtctgaaa
tataaaatcttacaacaaatcccagatcatccaaagcatttctccgtacatccagacacc
ggtgtcatcaccacaactacacctttactggatagagaaaaatgtgatatttaccagtta
ataatggaagtgcgagacatgggtggtcaacctttcggtttatttaatacaggaacaatt
actatttcacttgaggatgagaatgacaattcaccatttttcacagaaacttcttatgtt
acagaagtagaagaaaacagaattgacgtcgagattttgcgaatgaaggtccaggatcag
gatttgccaaacactgctcactcaagagctgtatacacaatcctacaaggaaatgaaaac
ggaaacttcaaaattagcacagatccaaatacaaatgaaggagtgttgtgtgttgtcaag
ccattgaactatgaggtcaatcggcaagtcattttgcaagttggtgtagttaatgaagca
caattctctaaagcagcaaactcacaaactcctacaatgtgcactacaactgtaactgtc
aaaattaaagaccgcgatgagggcccggaatgccaccctccagtgaaagttatccagagt
gaagatggcttcccagctggccaagaactccttggatacaaagcattagacccagaaaca
cgcagcggtgaaggcttaaggtacaagaagttaggggatgaagataactggtttgaaatt
aatgaagaaactggcgacttgagaactgtaaaagtactagatagagaatccaaattcgta
aaaaacaaccaatacaatatttcagttgttgcaatggatgcagttggcagatcttgcact
ggaacattagtagtttctttgactgataaaaatgatcatccgccacaaattaataaagaa
gtgaccatttgtcagaataatgaggattttgctgttctggcacctgtagatccagatggg
cctgaaaatgggccaccttttcaattccttctggataattctgccagcaaaatctgggtt
ctagaagaaaaggatggtaaaactgccattcttcgtcaacgacaaaatctagattataac
aattattttgtgcctatcaagataaaagacagacatggtttagttgcaacacatgtgtta
tcagtgagagtatgtgactgttcagtttcatctgagtgtaacctgcctgctaaaaatcta
agagacgttagaccaaatgtaatacttggaagatgggctatccttgctatggtgttgggt
tctgtattgttattatgtgttctgtttacatgtttctgtgtcactgctaagagaacagtc
aagaaatgttttccagaagacatagctcagcaaaatttaattgtatcaaatactgaagga
cctggagaagaagtaacggaagcaaatattagactccccatacagacctccaacatttgt
gacacaagcatgtctgctggtactgttggtggccagggaatcaaaacacagcaaagtttt
gagatggtcaaaggaggttacactttggactccaacaaaggaggaggacatcagactttg
gagtccatcaagggagtggggcagggagataccggcagatacacgtacacagactggcag
agtttcacccaacctcgacttggtgaaaaggtgtatttgtgtggacaagatgaggagcat
aaacattgtgaagactacgttcgttcgtataactatgaaggcaaaggttccctggccggc
tcagtaggctgctgcagcgatcgtcaggaagaagagggactagagtttctagatcacctg
gaacccaaatttaggacattagcaaagacatgtgtcaagaaataa
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