Callithrix jacchus (white-tufted-ear marmoset): 100413479
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Entry
100413479 CDS
T03264
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100413479 (RNF40)
Enzymes [BR:
cjc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100413479 (RNF40)
Ubiquitin system [BR:
cjc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
100413479 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
zf-RING_5
KASH_CCD
zf-RING_2
zf-RING_UBOX
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
100413479
NCBI-ProteinID:
XP_035123316
Ensembl:
ENSCJAG00000002878
UniProt:
U3DM56
LinkDB
All DBs
Position
12:28095029..28108062
Genome browser
AA seq
1001 aa
AA seq
DB search
MSGPGNKRAAGDGGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA
ERLEQRQACEDELRERIEKLEKRQATDDATLFIVNRYWAQLDETVEALLRCHESQGELSS
VPEAPGTQEGLTCDGTPLPEPGTSELREPLPMQLRPPLSEPALAFVVALGASSSEEVELE
LQGRMEFSKAAVSRVVEASDRLQRRVEELCQRVYSRGDSEPLSEAARARTRELGRENRRL
QDLATQLQEKHHRISLEYSELQDKVTSAETKVLEMETTVEDLQWDIEKLRKREQKLNKHL
AEALEQLNSGYYVSGSSSGFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAEL
QGAVRTNERLKVALRSLPEEVVRETTEYRVLQSQFSLLYNESLQVKTQLDEARGLLLATK
NSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPIN
REMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQPSGSTHSTPNVGHSEDSGL
NAPAPGKEEGGPGPVSIPDNRKEMAPMPGTTTTASSVKKEELVPSEEDVQALTPGAQGPS
FRGREPEARPKRELREREGPSLGPLPVASALSRAEREKAKVEEAKRKESELLKGLRAELK
KAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRELEERDRRESKK
IADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQLR
EKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERALQG
SLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAREK
ESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVL
TKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYIS
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggccaggcaacaaacgcgccgccggcgacgggggctcagggcctccggagaag
aagttgagtcgtgaggagaagaccaccaccactcttatcgagcccattcgtctgggaggc
atctcttccacggaggagatggacctgaaggtactacagttcaagaacaagaaactggca
gagcggttggaacagcgacaggcttgtgaagatgaactccgagaacgaattgagaagctg
gagaagcggcaggccacagatgatgccacactcttcattgtcaatcgctactgggcccag
ctggatgaaactgtggaagcccttctccgatgccatgagagccagggggagctgtcttca
gtgcctgaggcacctgggacccaggaggggctaacatgtgatgggactcctcttccagag
ccaggaacatcagagttgagggagcccttgccaatgcagctgcggccccctctcagtgag
ccggccttggcttttgtggtggcactgggtgccagcagcagtgaggaggtggagctggag
ctgcaaggccgaatggagttctccaaggcagctgtgtcccgtgtggtagaggcctcagac
cgcctacagcgccgggtggaggaactctgtcagcgagtgtacagccgaggggacagcgag
cccctcagtgaggcagctcgggcacgcacccgagagctgggccgtgagaaccggcggctg
caggatttggccacccagctgcaggagaagcatcaccgcatctcattggagtactctgag
cttcaggataaagttacatcggcagagaccaaggtgttggagatggagacgacagtggag
gacttgcagtgggacatcgagaagctgcggaagcgagagcaaaagctcaataagcacctg
gctgaggctttagagcagcttaactctggctattatgtgtctgggagctcctcaggcttc
cagggggggcagatcacactcagcatgcagaagtttgagatgctgaatgcagagttggag
gaaaaccaagaattggccaacagccgcatggcagagctggagaaactgcaggccgaactt
cagggggctgtgcggaccaatgagcgcctcaaggtggctctgcggagccttcctgaggag
gtggtgcgggagacgacagagtaccgtgtcctgcagtcccagttttcactgctgtacaac
gaatctctgcaagtgaagacccagttggacgaggctcggggcctgctgctggctaccaag
aactcccacctgcgacacatcgagcacatggagagcgacgagctggggctgcagaagaag
ctgcgcacagaggtcatccagctggaggacacactggcccaggtacgcaaggagtatgag
atgctgcgcatcgagtttgagcagaatctggcggccaacgagcaggcggggcccatcaac
cgtgagatgcgccatctgattagtagtcttcaaaaccacaaccaccagctaaaaggggat
gcccagcgatacaagcggaaacttcgagaagtacaagctgagattggcaagctccgggcc
cagcccagtggctctacccactccacccccaatgtgggccactcagaggactctggcctc
aatgccccagccccagggaaagaggagggtgggccaggccctgtcagtatccctgacaac
agaaaggagatggctccgatgcctggtaccaccactactgcctcctcagtgaagaaggag
gagctggtcccctctgaagaggatgtccaggccttaacccctggggcccagggtccttcc
ttccggggcagagaacctgaggccaggccgaagcgggagcttcgggaacgggagggtccc
agcctgggacctctacctgtagcttcagctctctcaagggccgaacgggagaaggccaag
gtggaagaggccaagcggaaggaatcagaactcctcaagggtctccgagcggagctcaag
aaggcccaggagagccagaaggagatgaaattgctgctggacatgtacaagtctgcgccc
aaggagcagcgggataaggtgcagctcatggcagcggaacgcaaggccaaggctgaggtg
gatgagctgcggagccgcatccgggaactggaggagagggatcgaagggagagcaagaag
attgctgacgaggatgccctgcggcgcattcggcaggcagaggagcagatagaacacctg
cagcgcaagctgggtgccacgaagcaggaggaggaggctctgctgtcagagatggatgtg
acaggtcaggcttttgaggacatgcaggaacagaacgggcggctgctacagcagttgcgg
gagaaggacgacgctaactttaagctgatgtcagagcggatcaaggccaaccagattcac
aagctgctgcgggaagagaaggatgagctgggcgagcaggtccttggcctcaagtcccag
gtggatgcccagctactgactgtgcagaagctggaggagaaggagagggccttgcagggc
agccttggtggtgtggagaaggagctgacactgcgcagccaagccctagagctcaacaaa
cggaaggctgtggaagccgcccagctggctgaggacctgaaggtgcagctggagcacgtg
cagactcggctgcgggagatccagccctgcctggcagagagccgagctgctcgtgagaaa
gagagcttcaacctcaagagagctcaggaggacatctcacggctgcggcgcaagctagag
aagcagaggaaggtggaggtctacgcagatgccgacgaaatcctccaggaggagatcaag
gagtacaaggcgcggttgacctgcccctgctgtaacacccgcaagaaggatgcagtcctt
accaagtgcttccacgtattctgcttcgagtgtgtgcggggccgctatgaggcccggcag
aggaagtgccccaagtgcaacgcggcctttggtgcccacgacttccatcgtatctacatc
agctga
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integrated database retrieval system
