Callithrix jacchus (white-tufted-ear marmoset): 100413716
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Entry
100413716 CDS
T03264
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit SSRP1 isoform X3
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100413716 (SSRP1)
03036 Chromosome and associated proteins [BR:
cjc03036
]
100413716 (SSRP1)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
100413716 (SSRP1)
Chromosome and associated proteins [BR:
cjc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
100413716 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
bPH_2
Motif
Other DBs
NCBI-GeneID:
100413716
NCBI-ProteinID:
XP_002755324
Ensembl:
ENSCJAG00000009013
UniProt:
U3DZB6
LinkDB
All DBs
Position
11:complement(111652825..111664830)
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AA seq
709 aa
AA seq
DB search
MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDE
SFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKKAKMAKDRKSRKKPVEVKK
GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA
EDARREYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSASRQLSESF
KSKEFVSSDESSSGENKSKKKRRRSEDSEEEELASTPPSSEDSASGSDE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacactggagttcaacgacgtctatcaagaggtgaaaggctccatgaatgat
ggtcgactgaggttgagccgccagggtatcatcttcaagaatagcaagaccggcaaagtg
gacaacatccaggctggggagctaacagaaggcatctggcgccgtgtagctctgggccat
ggacttaaactgcttacaaagaatggccatgtctacaagtatgatggcttccgagaatcg
gagtttgagaaactctctgatttcttcaaaactcactatcgccttgagttaatggagaag
gacctttgtgtgaagggctggaactgggggacagtgaaatttggtgggcagctgctttcc
tttgacattggtgaccagccagtcttcgagatacccctcagcaacgtgtcccagtgcacc
acgggcaagaatgaggtgaccctggaattccaccagaacgatgacgcagaggtgtctctc
atggaggtgcgcttctatgtccctcccacccaggaggatggcgtggaccctgttgaggcc
tttgcccagaatgtgttgtcgaaggcggatgtaatccaggccacgggagatgccatctgc
atcttccgggagctgcagtgtctgactcctcgcggtcgttacgacattcggatctacccc
acctttctgcacctgcacggcaagacctttgactacaagatcccctacaccacagtactg
cggctgtttctattgccccacaaggaccagcgccagatgttctttgtgatcagcctggat
cccccaatcaagcaaggccaaacccgctaccacttcctgatcctcctcttctccaaggac
gaggacatttcgttgactctgaacatgaatgaggaagaagtggagaagcgctttgagggt
cggctcaccaagaacatgtcaggatccctctatgagatggtcagccgggtcatgaaagca
ctggtgaaccgcaagatcacggtgccaggcaacttccaagggcactcaggggcccagtgc
atcacctgttcgtacaaggcgagctcaggactgctgtacccgctggagcggggcttcatc
tacgtccacaagccacctgtgcacatccgcttcgatgagatctcctttgtcaactttgct
cgtggtaccacgacgactcgttcctttgactttgaaattgagaccaagcagggcactcag
tataccttcagcagcattgagagggaggagtatgggaaactgtttgattttgtcaatgcg
aagaagctcaacatcaaaaaccgaggattgaaagagggcatgaacccaagctatgatgaa
tatgctgactctgatgaggaccagcatgatgcctacttggagaggatgaaggaggagggc
aagatccgggaggagaatgccaatgacagcagcgatgactcgggagaagaaactgatgag
tcattcaacccaggtgaagaggaggaagatgtggcagaggagtttgacagcaatgcctct
gccagctcttccagtaatgagggtgacagtgaccgggatgagaagaagcggaaacagctc
aaaaaggccaagatggccaaggaccgcaagagccgaaagaagcctgtggaggtgaagaag
ggcaaagaccccaatgcccccaagaggcccatgtctgcctacatgctgtggctcaatgcc
agccgagagaagatcaagtcagaccatcctggcatcagtatcacggatctttccaagaag
gctggcgagatctggaagggaatgtccaaagagaagaaagaggagtgggatcgcaaggct
gaggatgccaggagggaatatgaaaaagccatgaaggaatatgaaggtggccgaggcgag
tcttctaagagggacaagtcaaagaagaagaagaaagtaaaggtaaagatggaaaagaag
tccacaccttctaggggctcatcatccaagtcggcctcaaggcagctaagcgagagcttc
aaaagcaaagagtttgtgtctagtgatgagagctcttctggagagaacaagagcaaaaag
aagaggaggcggagcgaggactctgaagaagaagaactagccagtactccccctagctca
gaagactcagcgtcaggatccgatgagtag
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