Callithrix jacchus (white-tufted-ear marmoset): 100413840
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Entry
100413840 CDS
T03264
Symbol
SHOC2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
100413840 (SHOC2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_13
NKWYS
Motif
Other DBs
NCBI-GeneID:
100413840
NCBI-ProteinID:
XP_009008521
Ensembl:
ENSCJAG00000018854
UniProt:
U3FUC2
LinkDB
All DBs
Position
12:100512112..100598750
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AA seq
582 aa
AA seq
DB search
MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPSSIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIP
RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtagtttaggaaaagaaaaagactctaaagaaaaagatcccaaagtaccatca
gccaaggaaagagaaaaggaggcaaaagcctctggaggttttgggaaagaaagcaaagaa
aaagaacctaagaccaaagggaaagatgccaaagatggaaagaaggactctagtgctgcc
cagccaggggtggcattttcagttgacaatacgatcaaaaggccaaacccagcacctggg
actagaaaaaaatccagcaatgcagaggtgattaaagagctcaacaaatgccgagaagag
aattcaatgcgtttggacttatccaagagatctatacacatattgccatcatcaatcaaa
gagttgactcaattaacagaactttatttatacagtaacaaattgcagtccctcccagca
gaggtgggctgtttagtaaatctcatgacactggctctaagtgaaaattcacttaccagt
ttgcctgactctcttgataacttgaagaagctgcggatgcttgatttacggcataataaa
ctgagagaaattccttcagtggtgtataggctggattctctcaccactctttaccttcgc
tttaatcgtataactactgtggaaaaggacattaaaaacttgtcaaaactcagcatgctt
agcattcgagagaacaaaattaaacaactacctgctgaaattggtgaattatgtaacctc
attacgctggatgtagctcacaatcaacttgaacaccttccaaaggagattggaaactgt
acacagataaccaaccttgacttgcagcacaatgaactgctagacctcccagatactata
ggaaacctgtccagtttaagtcgtcttggtctgagatataacagactgtcagcaataccc
agatcattagcaaaatgcagtgcacttgaagaattaaatttagagaacaataacatttct
actttaccagagagtcttttatcaagtcttgtgaaattgaatagtttgaccttagctaga
aattgcttccagttatatccagtgggtggtccatctcagttttccaccatctattccctc
aatatggaacacaatcgaatcaataaaattccatttggaattttctccagagcgaaagta
ttaagtaagctgaatatgaaggacaatcagttaacatcacttcccttggattttggaact
tggaccagtatggtagaattgaatttagccactaatcagctcacaaagatcccagaagat
gtgtctggtctcgtttctcttgaggttcttatcttatcaaacaatcttctaaagaagctt
ccccatggtcttggaaaccttaggaagttaagagagttggatctagaagagaacaaattg
gaatccttgccaaatgagattgcatatcttaaggatttacagaaattagtcttgacaaac
aaccagttgaccactcttcccagaggcattggtcatcttaccaatctcacacatctgggc
cttggagagaacctgcttactcaccttcctgaagaaattggtacactggagaacctggaa
gaactgtatttgaatgacaaccccaatctgcatagccttccctttgagctggcactctgc
agcaagctttcaatcatgagtattgagaactgtccactcagtcaccttccacctcagatt
gttgctggggggccttctttcatcattcagttcctaaagatgcagggtccgtatcgtgcc
atggtttga
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