Callithrix jacchus (white-tufted-ear marmoset): 100413879
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Entry
100413879 CDS
T03264
Symbol
SEMA6C
Name
(RefSeq) semaphorin-6C isoform X2
KO
K06842
semaphorin 6
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100413879 (SEMA6C)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
100413879
NCBI-ProteinID:
XP_008982573
Ensembl:
ENSCJAG00000007159
UniProt:
U3EH97
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All DBs
Position
18:complement(4503303..4514192)
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AA seq
960 aa
AA seq
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MPRAPYSMPLLLLLLLLSLPHTQAAFPQDPLPLLISDLQGTSPLSWFRGLEDDSVAAELG
LDFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKYLTWRSQDVENCAVRGKLTDE
CYNYIRVLLPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNVAV
FAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYFFF
REVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVL
QALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDEIERGFEGKFKEQRSLDGAWTPV
SEDRVPSPRPGSCAGIGGAALFSSSRDLPDDVLTFIKAHPLLDPAVPPATHQPLLTLTSR
ALLTQVAVDGMAGPHSNITVMFLGSNDGTVLKVLPPGGRSGGPEPILLEEIDAYSPARCS
GKRAALTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASQDPYCGWH
SSRGCVDIRGPGGTDVDQAGNQESMEHGDCQDGATGSQSGPGDSAYVLPGPDLGTLSPPS
DAHPRPQSSTLGAYTRGVRRDLPPASASRSVPIPLLLASVAAAFALGASVSGLLVSCACR
RAHRRRGKDIETPGLPRPLSLRSLARLHGGGPEPPPPSKDGDAVQTPQLYTTFLPPPEGV
PPPELACLPTPESTPELPVKHLRAAGDPWEWNQNRNNAKEGPGRSRGGNAGGGFAPRVLV
RPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGAEPPLPLTSRALPPEPAPALLGGSGPR
SPECAQPLRLDVPPEVRCAAAPARPALSAPAPRLGVGGGRRLSFSSHRAPPALLTRVPSG
GTSRYSGGPGRHLLYLGRPEGYRGRALKRVDMEKPQLSPKPPLVGPSSRQAVPNGGHFNF
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgccccctactccatgcccttgctgctactgctgctgctgctctcgcttccc
catacccaggccgcctttccccaggaccccctccctctgttgatctctgaccttcaaggt
acttccccattatcctggtttcggggcctggaggacgattctgtggctgcagaacttggg
ctggactttcagagattcctgaccttgaaccggaccttgctagtggctgcccgggatcac
gttttctcctttgatcttcaagcccaagaagaaggggaggggctggtgcccaacaagtat
ctaacatggaggagccaagatgtggagaactgtgctgtgcggggaaagctgacggacgag
tgctacaactatattcgtgttcttcttccctgggactcccagacgctccttgcctgtgga
acgaactcattcagccctgtgtgccgcagctatgggataacttcgctgcagcaggagggt
gaggagctgagtgggcaggctcgatgcccctttgacgccacccagtccaacgtggccgtc
tttgcagagggcagcctgtactcagccacagctgcggatttccaggccagtgatgctgta
gtttacagaagcctcgggcctcagcccccactccgctccgccaagtacgactccaagtgg
ctccgagagccacactttgtccatgccctggagcatggagaccatgtctacttcttcttc
cgcgaggtctctgtggaggatgcccgactggggagggtgcagttctcccgagtagcccga
gtgtgtaaacgtgacatgggcggctcgcctcgggccttggaccgccactggacatccttc
ctgaagctgcggctcaactgctctgtccctggggactctactttctattttgacgtctta
caggccctgactgggcctgtgaacctgcatggccgctctgctctctttggggtcttcact
acccagaccaatagcatccctggctctgctgtctgcgccttctacctggatgagattgag
cgtgggtttgagggcaagttcaaggagcagaggagtctggatggggcctggactcctgtg
tctgaggacagggtcccctcacccaggccaggatcctgtgcaggaatagggggagctgcc
ttgttctcctcttctcgagacctccctgatgacgtcctgaccttcatcaaggctcacccg
ctgctggaccccgctgtgccacctgccacccatcagcctctactcactctcactagcagg
gccctactgacccaggtagctgtggatggcatggctggtccccacagtaacatcacagtc
atgttccttggctccaatgacgggacagtgctgaaggtgctgcccccaggtgggcgatct
gggggacctgagccgatcctcctggaagagattgatgcctacagccctgccaggtgcagt
gggaagcgggcagccctaacagcacgacggatcatagggctggagctggacactgagggt
cacaggctctttgtggctttttctggctgtattgtctacctccctctcagccggtgtgcc
cggcatggggcctgtcagaggagctgtctagcttctcaggacccatactgtggatggcac
agctccagaggctgtgtggatatcaggggacctggtgggactgatgtggatcaggctggg
aaccaggaatccatggagcatggtgactgccaagacggagctactgggagtcagtctggc
cctggggattctgcttatgtgcttcctggtcctgaccttgggaccctcagtccccccagt
gatgcccacccccggccccagtcttccactcttggagcttacactcggggcgtgcgccgg
gacctgcccccagcctcagcctcccgctccgtccccatcccactcctcctggccagtgtg
gccgcagctttcgccctgggcgcctcagtttctggccttctggtctcctgtgcttgtcgc
cgcgcccaccgacgtcgaggcaaggacatcgagactccggggctcccgcgccctctttcc
ctccgcagtttggcccggctccacggcgggggcccagagcccccgccgccctccaaggac
ggcgacgcggtgcagacgccgcagctgtacaccaccttcctgccgcctcccgagggcgtg
cccccgccggagctggcctgcctgcccacccccgagtccacgccggagctgccggtcaag
cacctccgcgccgccggggacccctgggagtggaaccagaacagaaacaacgccaaggag
ggcccgggccgctctcggggcgggaacgcggggggcgggttcgctccccgcgtgctggtg
aggccgccacctcccggctgtcccgggcaggcggtggaagtcaccaccctggaggaattg
ctgcgctacctgcacggtccgcaaccgcccaggaagggggccgagcccccacttccttta
acctcgcgggcgctcccgccggagcccgcccccgccctcttgggtggctccggaccccgg
tccccggagtgcgcccagccgctgaggctggacgtgccccccgaggtcaggtgcgccgct
gcccccgcccgacccgcgctctccgcccccgctccccggctgggcgtcggcgggggccgg
aggttgtctttctccagccaccgggccccccctgccctgctcactcgagtcccctcgggg
ggtacctccaggtactccggggggcccgggaggcacctcctgtacctaggccggcccgag
ggctaccggggccgcgccctgaagagggtggacatggagaagccccagctgtccccgaag
cctcccctcgtcgggccctcctcccgccaggccgtcccgaatggcggccatttcaacttt
taa
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