Callithrix jacchus (white-tufted-ear marmoset): 100413987
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Entry
100413987 CDS
T03264
Symbol
SEMA5A
Name
(RefSeq) semaphorin-5A isoform X1
KO
K06841
semaphorin 5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100413987 (SEMA5A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_1
Sema
TSP1_spondin
TSP1_2
TSP1_CFP_C
PSI
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
100413987
NCBI-ProteinID:
XP_035147668
Ensembl:
ENSCJAG00000008962
UniProt:
A0A8I3VW75
LinkDB
All DBs
Position
2:192936137..193439960
Genome browser
AA seq
1080 aa
AA seq
DB search
MKGTCVIAWLFSSLGLWRLARPEAQGETQCQRAEHPVISYKEIGPWLREFRAKNAVDFSQ
LTFDPGQKELVVGARNYLFRLQLEDLSLIQAVEWECDEATKKACYSKGKSEEECQNYIRV
LLVGGDRLFTCGTNAFTPVCTNRSLSNLTEIHDQISGMARCPYSPQHNSTALLTAGGELY
AATAMDFPGRDPAIYRSLGILPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH
DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQSTFFLPEL
DLIYGIFTTNVNSIAASAVCVFNLSAIAQTFAGPFKYQENSRSAWLPYPNPNPNFQCGTV
DQGLYVNLTERNLQDAQKFILMHEVVQPVTTMPSFMEDNRRFSHVAVDVVQGRDALVHII
YLATDYGTIKKVRAPVNQTSRSCLLEEIELFPERRRESIRSLQILHSQSVLFVGLREHVV
KIPLKRCQFYRTRSTCIGAQDPYCGWDVVMKKCTSLEQSLSMTQWEQSISACPTRNLTVD
GAFGMWSPWTPCTHTDGSAVGSCLCRTRSCDSPAPQCGGWQCEGPSMEIANCSRNGGWTP
WTSWSPCSTTCGIGFQVRQRSCSNPTPRHGGRVCVGQNREERKIHPALYCNEHLLCPPHM
FWTGWGPWERCTAQCGGGIQARRRTCENGPDCAGCNVEYQPCNTSPCPELKKTTPWTPWT
PVNISDNGGHYEQRFRYTCKARLPDPNLLEVGRQRIEMRYCSSDGTSGCSTDGLSGDFLR
AGRYSAHTVNGAWSAWTSWSQCSRDCSRGIRNRKRVCNNPEPKYGGMPCLGPSLEYQECN
ILPCPVDGVWSCWSPWTKCSATCGGGHYMRTRSCSNPAPAYGGDICLGLHTEEALCNTQP
CPESWSEWSDWSECEASGVQVRSRQCIPLFPVGSQCSGNTTESRPCVFDSNFIPEVSVAR
SSSVEEKRCGEFNMFHMIAVGLSSSILGCLLTLLVYTYCQRYQQQSHDATVIHPVSPAPL
NTSITNHINKLDKYDSVEAIKAFNKNNLILEERNKYFNPHLTGKTYSNAYFTDLNNYDDY
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaacctgtgttatagcatggctgttttcaagcctggggctatggagactcgcc
cgcccagaggcccagggcgagactcagtgccagagagccgagcacccggtcatctcctat
aaagaaattggcccctggttacgggagttcagagcgaagaatgctgtggatttctcgcag
ttaacatttgacccaggacagaaagaacttgttgtaggagcaagaaactacctcttcagg
ttacagcttgaggatctgtctcttatccaggctgtggaatgggagtgtgatgaagctacc
aagaaggcctgttacagcaaaggcaagtccgaggaggaatgtcagaactacatccgggtg
cttctggtgggtggtgaccggttattcacctgtgggaccaatgcattcacacctgtctgc
accaaccgctcgttgagcaacctgactgagatccacgatcagatcagtggcatggcccgc
tgtccctacagtccccagcacaattccacagcactcctcacagctggcggggagctctat
gctgcgacagccatggattttccaggacgtgatcctgctatttaccgaagcctgggcatt
ttaccacctctccgcacggcgcagtacaactccaaatggctcaatgaaccaaactttgtg
tcatcttatgacattggaaattttacctacttctttttccgagaaaatgccgtagagcat
gactgtgggaaaacagtgttctccagagctgcccgggtctgcaagaacgatattggaggg
cgcttcctgctggaggatacctggaccaccttcatgaaggctcgcctcaactgctcccgt
cctggggaagtccccttttactacaacgaattgcagagcactttcttcctgcctgagctg
gatttgatctacggcatctttaccaccaatgtgaacagcattgcggcctcagctgtgtgt
gtcttcaacctgagtgccattgcacagaccttcgccgggcccttcaagtaccaggagaac
tcgcgctccgcctggctaccgtatcccaacccaaaccccaacttccagtgtggcaccgtg
gaccagggcctgtacgtgaacctgaccgagagaaacctgcaggatgctcagaagttcatt
ctgatgcatgaggtggtgcagccagtgaccaccatgccatccttcatggaggacaacaga
cgcttttcccacgtggctgtcgacgtggtgcagggcagagacgcactcgtccacatcatc
tatttggccacagattatggaaccattaagaaagtgcgggcaccggtgaatcagacctca
aggagctgtttgctggaagagattgagctcttccctgagaggcggagggaatccatcagg
agcctgcagatcctgcacagccagagcgtcctgttcgtgggcctgcgggagcatgtggtc
aagatccccctgaagaggtgccagttctatcgtacacgcagcacctgcattggggcccag
gacccttactgtggctgggacgtggtgatgaagaagtgcacgagcctggagcagagcctg
agcatgacacagtgggaacagagcatctctgcatgtccgaccaggaatctcactgtggat
ggagcctttggcatgtggtctccgtggacaccctgcacgcacacagacggcagcgccgtg
ggatcctgcctgtgtcggacccgctcctgcgacagcccggccccacagtgtgggggctgg
cagtgtgagggccccagcatggagatcgccaactgttccaggaatggaggctggactcct
tggacctcgtggtctccctgcagcactacctgtgggatcggcttccaggtgcggcagcgc
tcctgcagcaaccccactcccaggcacgggggccgggtgtgcgtgggacagaaccgcgag
gaaaggaagatccatcctgcattatactgcaatgaacatttgctgtgtcccccacacatg
ttctggacaggctggggtccttgggaacggtgcacagcccagtgcgggggtggcattcaa
gctcgtcgcaggacctgtgagaatgggcctgactgtgcaggctgcaacgtggagtaccag
ccttgcaacaccagcccgtgtcctgagctgaagaagaccacgccctggactccctggacg
cccgtcaacatctctgacaatggcggccactatgagcagcggttcagatacacgtgcaaa
gcccgcctgcccgatccgaatttgctggaagtgggaagacagagaatagaaatgaggtac
tgttctagtgacggcaccagtggctgctccacagatgggctgtctggggatttcctgcgt
gctgggagatactctgcccacacggtcaatggggcttggtcagcctggacatcgtggtca
cagtgcagccgtgactgcagcaggggcattcggaaccggaagcgtgtgtgcaacaaccca
gaacccaagtatggggggatgccttgcctcggcccatccctggaataccaagaatgcaac
atcttgccctgcccagtggatggcgtgtggtcttgctggtccccctggacaaaatgctca
gcaacatgcggcggtgggcactatatgaggacccgctcatgctccaatccagccccggcc
tacggaggggacatctgcctggggctgcacacggaagaagcgctctgcaacacgcagccc
tgcccagagagctggtcggagtggtcggactggtctgagtgcgaagcctccggcgtccaa
gtccgctcccgccagtgcatccccctcttccccgtgggcagccagtgctccgggaacacc
acagagagccggccatgtgtgttcgactctaacttcatcccagaagtatctgtggcaaga
tccagtagcgtagaagagaaaaggtgtggagaattcaacatgttccacatgattgccgtg
gggctgagtagctccatcctcggctgcctcctcaccctgctcgtctacacctactgccag
cggtaccagcagcaatcccacgatgcaactgtcatccaccctgtatcgcctgcccctctc
aacaccagcataaccaaccacatcaacaaactggacaagtacgactcggtggaggccatc
aaggcatttaacaaaaacaacttgatcctagaggaaagaaacaaatacttcaacccacat
ctcactgggaagacctactccaacgcctactttacagatctcaataattatgatgattat
taa
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