Callithrix jacchus (white-tufted-ear marmoset): 100414293
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Entry
100414293 CDS
T03264
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100414293 (RAD54L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100414293 (RAD54L)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
100414293 (RAD54L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
100414293
NCBI-ProteinID:
XP_035107229
Ensembl:
ENSCJAG00000021080
LinkDB
All DBs
Position
7:80091515..80121118
Genome browser
AA seq
798 aa
AA seq
DB search
MADTTAERREVPLARSWRVVKSQRLLTRALEEEGCERRGGVCVQLFRSFQLLLRRSLAPS
QLAKRKPEGRSSDEDWQPGLVTPRKWKSSSETQIQECFLSPFRKPLSQLTNQPPCLDSSQ
HEAFIRSILSKPFKVPIPNYQGPLGSRALGLKRAGVRRALHDPLEKDALVLYEPPPLSAH
DQLKLDKEKFPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGK
TLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKD
DIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTY
QALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKGRDAAA
SEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLR
QAKPAEELHEGKMSVSSLSSITSLKKLCNHPALIHDKCVEGEDGFEGALDLFPPGYSSKA
LEPQLSGKMLVLDYILAVTRSCSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSI
KKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWR
DGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFILDE
ASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSDLAQWNHCTDKRGLQDEVLQAAWDAAST
AVTFVFHQRSHEEQRGLR
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacgacggcagagcggcgggaggttccattggctcggtcttggcgggtcgtt
aagtctcagcggctgttaacgcgtgctttggaagaggaaggttgcgagagacgtggtggg
gtctgcgtgcaactctttcgctcttttcagctcctcctgaggaggagcttagctcccagc
cagctggccaagagaaaaccggaaggcaggtcatctgatgaagactggcaacctggcctg
gtgactcctaggaaatggaaatccagcagtgagacccagatccaggagtgtttcctgtct
ccttttcggaaacctttgagtcagctaactaatcaaccaccttgtctggacagcagtcag
catgaagcatttattcgaagcattttgtcgaagccattcaaagtccccattccaaattat
caaggtcctctgggctctcgggcattgggcctgaaaagggctggggtccgccgggccctc
catgatcccctggagaaagatgccttggttctgtatgagcctcccccactgagcgcccat
gaccagctgaagctcgacaaggagaaattccctgtccatgtggttgttgaccctattctc
agtaaggttttgcggcctcatcagagagagggagtgaaattcctgtgggagtgtgtcacc
agtcggcgcatccctggcagccatggctgcatcatggctgatgagatgggcctgggaaag
acgctgcagtgcatcacattgatgtggacacttttgcgccagagtccagagtgcaagcca
gaaattgacaaggcagttgtggtgtcaccctccagcctggtgaaaaactggtacaatgag
gttgggaaatggctcggagggaggatccaacctctggccatcgatggaggatctaaggac
gacatagaccaaaagctggaaggattcatgaaccagcgtggagccagagtgccttctccc
atccttatcatttcctatgagaccttccgccttcatgttggagtcctccagaaaggaagt
gttggtttggtcatatgtgacgagggacacaggctcaagaactctgagaatcagacttat
caagccctggacagcttgaacactagccggcgggtgctcatctctggaacccccatccag
aatgatctgcttgagtatttcagcttggtacattttgttaattctggcatcctagggact
gcccaggaattcaagaagcattttgaattgccaattttgaagggtcgagatgctgctgct
agtgaggcagacaggcagctaggagaggagcggctgcgggagctcaccagcattgtgaat
agatgcctgataaggaggacatcagatatcctttctaaatatctgcctgtgaagattgag
caggtcgtttgttgcaggctgacaccccttcagactgagttatataagaggtttctgaga
caagcgaagccggcagaagaattgcatgagggcaagatgagtgtgtcttctctttcttct
atcacctcgctaaagaagctttgtaatcatccagctctaatccatgataagtgtgtggaa
ggggaggatggctttgaaggtgccttggacctcttccctcctggttacagctctaaggcc
ctggagccacagctgtcaggaaagatgctggtcctggattacattctggcggtgacccga
agctgtagcagtgacaaagtcgtgctggtgtcgaattacacccagactttggatctcttt
gagaagctgtgccgggcccgaaggtacttatatgtccgcctggatggcacaatgtccatt
aagaagcgagccaaggttgtagaacgcttcaatagtccatcgagccctgactttgtcttc
atgctgagcagcaaagctgggggctgtggcctcaatctcattggggctaaccggctggtc
atgtttgaccctgactggaacccagccaatgatgaacaagccatggcccgggtctggcga
gacggtcaaaagaagacttgctatatctaccgcctactgtctgcagggaccattgaggag
aagatcttccagcgtcagagccacaagaaggcactgagcagctgtgtggtggatgaggag
caggatgtagagcgccacttctctctgggcgagttgaaggagctatttatattggatgaa
gctagcctcagtgacacacatgacaggttgcactgccgacgctgtgtcaacagccgccag
attcggccaccccctgatggttctgactgcacttcagacctggctcagtggaaccactgc
actgataagcgggggctccaggatgaggtactccaggctgcctgggatgctgcctccact
gccgtcaccttcgtcttccaccagcgttctcatgaggagcagcgagggctccgctga
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