Callithrix jacchus (white-tufted-ear marmoset): 100414347
Help
Entry
100414347 CDS
T03264
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100414347 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100414347 (CNOT6)
Enzymes [BR:
cjc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
100414347 (CNOT6)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100414347 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100414347 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
100414347
NCBI-ProteinID:
XP_035146675
UniProt:
U3FFQ9
LinkDB
All DBs
Position
2:69031858..69115349
Genome browser
AA seq
557 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSTEEAANGKKSHWAELEISGKVRSLSASLWSLTHLTALHLSD
NSLSRIPSDIAKLHNLAYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYQEPDGTRRLLNYLLDNLSGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRNLKSSVLGEFGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLKSAYESGLMPYT
NYTFDFKGIIDYIFYSQPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgaccctcggaggatgtatacaattatgtctact
gaggaagcagcaaatggaaagaaatcccactgggcagagcttgaaataagtggaaaagta
agaagcttaagtgcatctttgtggtcactaactcatctgacagctttgcatttgagtgac
aattccctgtcccgaattccttcagacattgccaagcttcacaatctggcgtatttggac
ctgtcatctaataaaatccgtagcttacccgcagaactcggaaacatggtatcactcagg
gagctccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaatccccttacccaggatatattgaacctttat
caggaaccagatggaacaagacggctgctgaactatttgcttgataatttgtcaggtact
gcaaaaagaatttcaacagaacaaccacctccaaggtcttggattatgttacaagaacca
gatagaacaaggccaactgccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatatggctactgtccatcatgggcactaaactgggactacagg
aaaaaggccattattcaagaaatcttgagctgcaatgctgatatcgtaagtcttcaggag
gttgaaacggaacagtattacagtttttttctggtagaactgaaagaacgtggctataat
ggattctttagtcctaagtctagagctaggacaatgtcagaacaagagaggaaacatgtt
gatggctgtgcaatattcttcaagacagaaaaatttactttggttcagaaacacactgtt
gaatttaatcagctagccatggcaaattctgaagggtctgaagctatgctgaacagagtc
atgacaaaagataacattggagttgcagtactgctagaacttcgaaaggaattgattgaa
atgtcatctggaaagccacatcttggaacagaaaaacaacttattcttgtggctaatgct
cacatgcattgggaccctgaatactctgatgtgaagttggtgcagactatgatgttcctc
tcggaagtgaagaacattattgataaagcctctcgtaacctcaaatccagtgtattggga
gaatttggaactattccacttgtgttatgtgcagatcttaattctttgccagattctggt
gttgtagaatatttgagcacgggtggagtagaaacaaatcacaaagactttaaggagctg
aggtataatgaaagtctcacaaacttcagctgtcatgggaagaatggaaccaccaatgga
aggatcactcatggtttcaagttaaagagtgcctacgagagtggtctgatgccttacacg
aattacacatttgatttcaagggtataatcgactacattttctattctcaacctcagctg
aacaccttaggcattctgggccctctggaccaccactggctggttgagaataacatcagt
ggctgcccacaccccctcatcccctctgaccacttctcactttttgcacaactggagctc
ttactgccgttcctgccccaagtcaatggcatccaccttcctggcaggaggtag
DBGET
integrated database retrieval system
