Callithrix jacchus (white-tufted-ear marmoset): 100414440
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Entry
100414440 CDS
T03264
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X2
KO
K13175
THO complex subunit 6
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100414440 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cjc03019
]
100414440 (THOC6)
03041 Spliceosome [BR:
cjc03041
]
100414440 (THOC6)
Messenger RNA biogenesis [BR:
cjc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100414440 (THOC6)
Spliceosome [BR:
cjc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100414440 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_IP5PC_F
EIF3I
WDR54
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
100414440
NCBI-ProteinID:
XP_002755872
Ensembl:
ENSCJAG00000015451
UniProt:
U3C1X1
LinkDB
All DBs
Position
12:2908339..2911675
Genome browser
AA seq
341 aa
AA seq
DB search
MEQAVPLAVPLGQAEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWVEMLKKGCKELWCRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGTFTRVLRGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRTAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTIFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagctgtgccgctcgcggtgcctctgggtcaggcagaggtgttccaggccttg
cagcggctccatatgaccatcttctcccaaagcgtctcaccgtgtgggaagtttctggca
gctggcaacaattatgggcagatcgccatctttagcttgtctgctgctttgagctcggaa
gccaaagaggaaagtaagaagccggtggtgactttccaagcccatgatgggccggtctac
agcatggtctccacagatcgacatctgctcagtgctggggatggggaggtgaaggcctgg
ctttgggtggagatgctcaagaagggctgtaaggagctgtggtgccgtcagcctccatac
aggaccagcctggaagtgcctgagatcaatgctttgctgctggtccccaaggagaattct
ctcatcctggctgggggagactgtcagctgcacactatggaccttgaaactgggaccttc
acgcgggtcctccggggccacacagactacatccattgcctggcattgagagaaaggagc
ccagaggtgctgtcgggtggtgaggatggagctgttcgactttgggacttgcgcacagcc
aaggaggtccagacaatcgaggtctataagcacgaggagtgctccaggccccacaatggg
cgctggatcggatgtttggcaactgattctgactggatggtctgtggagggggcccagcc
ctcaccctctggcacctgcgatcctccacacccaccaccatcttccccatgcgggcgcca
cagaagcacgtcaccttctaccaggacctgattctgtctgcgggccagggccgctgtgtc
aaccagtggcagctgagcggggagctgaaggcccaggtgcctggctcctccccagggctg
ctcagcctcagcctcaaccagcagccagccgcgcccgagtgcaaggtcctcacagctgca
ggcaacagctgtcgggtggacgtcttcaccaacctgggctaccgagccttctccctgtct
ttctga
DBGET
integrated database retrieval system
