Callithrix jacchus (white-tufted-ear marmoset): 100414471
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Entry
100414471 CDS
T03264
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100414471 (SH3TC2)
Membrane trafficking [BR:
cjc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
100414471 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
SH3_9
SH3_1
TPR_1
SNAP
TPR_2
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
100414471
NCBI-ProteinID:
XP_002744397
Ensembl:
ENSCJAG00000021183
UniProt:
F7FT10
LinkDB
All DBs
Position
2:complement(45739318..45808338)
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AA seq
1288 aa
AA seq
DB search
MGGCFCVPGERSLTWGPGKETPFKDPTVSSECIASPEYKEKCFLPQNMNPDLTLSFCVKS
RSRRCVNGPLQEAARRQLWALENEDQEVRMLFKDLSARLVSIQSQRAQFLITFKTMEEIW
KFSTYLNLGYVSMCLEHLLFDHKYWLNCILVEDTEIQVAVDDKHLETIYLGLLIQEGHFF
CRALRSVTPPAEKEGEWLTLCKNELISVKMAEAGSEWEGVSLVTGQRGLVLVSALEPLPL
PFHQWFLKNYPGSCSLSRNKDWTGSYQIGRGRCKALKDYEPEEKDELSFYQGESIEIIGF
VIPGLQWFIGKSTSSGQVGFVPTRNIDPDSYSPMSRNSAFLSDEERCSLLALGSDKQAEC
SSFIHTLARTDITSVYRLSGFESIRNPPNDLSASQLEGFKGARPGRAWEDRQAVGFQQSS
SSEDSSLEGELLSAASDSYRLPEPDDLDDPELLMDLSTGQEEEAENFAPILAFLDHEGYA
DHFKSLYDFSFSFLTSSFYSFSEEDEFVAYLEASRKWAKKSHRTWAHARLCFLLGRVSIG
KVKLSQARVYFEEAIHILNGAFEDLSLVAALYINLAAIYLKQRLRHKGSTLLEKAGALLA
CLPDRESSAKNELDVVAYVLRQGIVVGSNPLEARACFLAIRLLLSLGRHEEVLPFAERLQ
LLSGHPPASEAVTSVLSFLYDKKYLPHLAVASVQQHGIQSAQGMSLPIWQVHLVLQNTTK
LLGVPSPGWGGVSTLACPMLRQALAACEELADWSTQRALCLILSKVYLQHRSPDGAIHYL
NQAVVLGQLLGEQESFESSLCLAWAYLLASQAKKALDVLEPLLCFLKETESVTQKGVVHN
LLGLALQGEGRVNRAAKSYLRALNRAQEVGDVRNQAVAMANLGHLSLKCWAQHPARNYLR
QAVRLYCELQGSKETDMELVQVFLWLAEVLVSGRQLTHGLLCYEVALLFGLRHRHLKSQL
QVTKSLCHFYSSVSPSPEACITYHEHWLALAQQLRDREMEGRLLESLGQLYRNLNTVRSL
RRSLTCIKESLRIFIDLGERDKAAEAWLGAGRLHYLMQEDELVELYLQAAIQTALKSEEP
SLALKLYEEAGDVFFNGTRQRHHAVEYYRAGAIPLARRTKAVRTELRIFNKLTELQISLE
GYEKALEFATLAARLSTVTGDRRQELVAFHRLATVYYSLHMYEMAEDCYLKTLSLCPPWL
QSPKEALYYAKVYYRLGRLTFCQLKDAHDATEYFLLALAAAVLLGDEELQDTIRSRLDNI
CQSPMWHSSPSGRSSERARWLSGGGLAL
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgggtggctgcttctgcgtccccggggagcggagtctgacctggggcccaggtaaagaa
actcctttcaaggatccaactgtttcgagtgagtgtatagcctcacctgaatacaaggaa
aaatgttttctgccacagaacatgaatccagacctgacactctccttctgtgtaaagagc
cgctcgaggaggtgtgtaaatggacccctgcaggaagctgctcggaggcagctctgggca
ttggagaatgaggaccaggaggtacgcatgttgtttaaggatctctcagcaaggttggtc
agcatccagtctcagagggcccagtttctcatcaccttcaaaaccatggaggaaatctgg
aagttctccacctaccttaatttaggctatgtatccatgtgtctggagcatctcctcttt
gaccacaagtactggctcaactgcatattggtggaggatacagagatccaagtggctgta
gatgataaacacctggaaacaatatacctgggactcctgatacaggaaggccacttcttc
tgtagagccctgcgctctgtgactccaccagccgagaaggaaggggagtggttgacactt
tgcaagaatgagttaatctcagtgaagatggcagaagcagggtccgagtgggaaggcgtg
tccttggtgacaggtcagcggggcctggtactggtgtcagccttggagcctctgcctctc
cctttccaccaatggttcctaaagaattatccaggaagctgcagcctttccaggaacaag
gattggacaggttcctatcagattggcagaggacgctgtaaggccttgaaggattatgag
ccagaagaaaaggatgaactgagtttctaccagggagaaagcattgagatcattggcttt
gtcatacctgggcttcagtggttcattggaaagtcgacgagttcagggcaagtgggcttt
gtccccaccaggaacatagatcctgattcttattccccaatgagcaggaactctgccttt
ctcagtgatgaggagagatgctccctgttggccctgggaagtgataagcaggctgagtgt
tcaagcttcatccacactcttgctcgcactgacatcacatctgtctaccggctcagtggg
tttgaatccatccggaatcctccaaatgatctgagtgcatcccagctcgaaggcttcaag
ggggccaggcctggcagagcctgggaggaccgtcaggctgtgggcttccaacagtccagc
agctctgaagactccagtctggagggggagctcctctcggcagcctcagatagctatcga
ctgccagaacctgatgaccttgatgacccagaactgctcatggacctaagcactggtcag
gaagaggaagctgagaacttcgcccccatattggcttttctggatcatgaaggttacgcc
gaccactttaagagtctctatgacttctccttctctttcctcacttcttccttttatagc
ttctctgaggaggatgagtttgtggcctacctggaggcatcgagaaagtgggccaaaaag
agccacaggacctgggcccatgcccggctctgcttcctcctgggccgggtgagcatcggg
aaggtcaaactctctcaggccagggtgtactttgaggaggccattcacattctcaatggg
gcatttgaggacctatccttggtggccgctctgtacatcaatttggctgccatctacctg
aagcagaggttgagacataaaggctccaccctgttggaaaaggcaggagccctgctggcc
tgcctgcctgatcgtgagtctagtgccaagaatgaacttgatgtggtggcctacgtgctg
cgccaggggattgtggtgggcagtaacccgctggaggccagggcttgctttctggccatc
cgcttgctcctgagcctaggccggcatgaggaggtcctgccctttgctgagcgcctgcag
ctcctctctggacaccctcctgcctctgaggctgtgaccagtgttttgagttttctgtat
gacaagaaatatcttccacaccttgcagtggcatctgtccagcaacatggtatccagagt
gctcaagggatgtctcttccaatttggcaggtccacctggtcctccagaacacaaccaag
ctccttggcgttccctccccaggctggggtggagtttccaccttggcctgccccatgctc
agacaggccctggctgcctgtgaggaactagcagactggagcacccagagggccctgtgt
ctcatcctgtcaaaagtgtacctccagcacaggtctcctgatggtgccatccactacctg
aaccaggcagtggtgctagggcagctgctgggtgagcaggaatcctttgaatcttccctc
tgcctggcatgggcctatctcttagccagccaggccaagaaggctttggacgtgcttgag
ccactgctatgcttcctgaaggagacggagagtgtcactcaaaagggagttgtccataac
ctcctgggacttgcactccaaggtgaaggccgggtgaacagggcagccaagagctatctt
cgggctttgaacagagctcaggaggtgggagatgtgcgtaaccaggcagtggctatggcc
aatcttggccacctgagcctgaagtgctgggctcagcatccagccagaaactatctccgg
caggctgtacgactctattgtgaactccaaggcagcaaggagacagacatggaattagta
caggtgtttctctggttggctgaagttctggtctctggacgccagctgacgcatggcctc
ctttgctatgaagtggcattgctgtttggcttaaggcatcgacacctaaagagtcagctt
caggtcaccaagtccctctgccatttctacagctccgtgtccccaagtcctgaagcatgc
attacctaccatgagcattggctggccctggctcagcaactcagggaccgggaaatggaa
gggaggctgctggagtccctggggcagctctatcggaacctaaacactgtgaggtcactc
aggaggtccctcacgtgcatcaaggagagcctgcgtatcttcattgacctgggggagaga
gacaaggctgctgaggcctggcttggggcagggcgactccactacctcatgcaagaagac
gagctggtggagctgtaccttcaggcagccatccagacagccctgaagtcagaggagcct
tcgctggctctcaaactttatgaagaagcaggtgatgtgttcttcaatgggacccgccag
agacatcacgcagtggagtactaccgagctggagctattcctttagcaaggaggacgaag
gcagtgagaactgagctccggattttcaacaagctgacagagctgcagatcagccttgaa
ggctatgagaaggctttggaatttgccacccttgctgccaggctcagcacagtcacagga
gatcggaggcaggagctggtggcctttcaccgcctggctacagtgtactactccctacac
atgtatgagatggctgaggactgctatctgaagactctgtccctctgtccaccctggctg
cagagtcccaaggaggctttgtactacgccaaggtgtattatcgcctgggccgactcacc
ttctgccagctgaaggatgcccacgatgccactgagtacttcctgctggccctggcagca
gcggtcctgctgggtgacgaggagcttcaggacactattaggagcaggctggacaacatc
tgccagagccccatgtggcacagcagcccatctgggcgctcctcagagagggcgcggtgg
ctgagtggtggtggcctggccctctga
DBGET
integrated database retrieval system
